Pre_GI: BLASTP Hits

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Query: NC_017168:50391:73835 Yersinia pestis A1122 chromosome, complete genome

Start: 73835, End: 74950, Length: 1116

Host Lineage: Yersinia pestis; Yersinia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Specific virulence factors are encoded within pathogenicity islands (PAIs) that are required for the invasive phenotype associated with Yersinia infections. One key virulence plasmid contained by the three human-specific pathogens is pCD1/pYv, which encodes a type III secretion system for the delivery of virulence proteins that contribute to internalization into the host cell. It is the causative agent of plague (bubonic and pulmonary) a devastating disease which has killed millions worldwide. The organism can be transmitted from rats to humans through the bite of an infected flea or from human-to-human through the air during widespread infection. Yersinia pestis is an extremely pathogenic organism that requires very few numbers in order to cause disease, and is often lethal if left untreated. The organism is enteroinvasive, and can survive and propagate in macrophages prior to spreading systemically throughout the host. Yersinia pestis also contains a PAI on the chromosome that is similar to the SPI-2 PAI from Salmonella that allows intracellular survival in the organism.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017265:854492:8778498778498789641116Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,Agmatine deiminase0769
NC_010465:933488:9569479569479580621116Yersinia pseudotuberculosis YPIII, complete genomeagmatine deiminase0769
NC_008150:361224:3867033867033878181116Yersinia pestis Antiqua, complete genomehypothetical protein0769
NC_005810:3964468:3989148398914839902631116Yersinia pestis biovar Microtus str. 91001, complete genomeagmatine deiminase0769
NC_009381:627685:6510416510416521561116Yersinia pestis Pestoides F chromosome, complete genomeagmatine deiminase0769
NC_014029:1001000:1024418102441810255331116Yersinia pestis Z176003 chromosome, complete genomehypothetical protein0769
NC_017154:941065:9665639665639676781116Yersinia pestis D106004 chromosome, complete genomehypothetical protein0769
NC_017160:945176:9685389685389696531116Yersinia pestis D182038 chromosome, complete genomehypothetical protein0769
NC_013421:163114:1811791811791822821104Pectobacterium wasabiae WPP163, complete genomeagmatine deiminase3e-165581
NC_014500:177824:1980611980611991641104Dickeya dadantii 3937 chromosome, complete genomeAgmatine deiminase2e-162572
NC_021150:4929670:4949668494966849507861119Azotobacter vinelandii CA6, complete genomeagmatine deiminase4e-115414
NC_012560:4929683:4949681494968149507991119Azotobacter vinelandii DJ, complete genomePorphyromonas-type peptidyl-arginine deiminase4e-115414
NC_010501:5442000:5459657545965754607631107Pseudomonas putida W619, complete genomeagmatine deiminase2e-114412
NC_005773:176885:1811051811051822111107Pseudomonas syringae pv. phaseolicola 1448A, complete genomepeptidyl-arginine deiminase-like protein8e-113407
NC_020209:5077410:5078827507882750799331107Pseudomonas poae RE*1-1-14, complete genomeagmatine deiminase4e-112404
NC_020291:2701149:2715735271573527168381104Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genomeputative agmatine deiminase AguA2e-67256
NC_014829:4565467:4579521457952145805401020Bacillus cellulosilyticus DSM 2522 chromosome, complete genomeAgmatine deiminase2e-66253
NC_011831:853433:8736428736428746851044Chloroflexus aggregans DSM 9485, complete genomeAgmatine deiminase7e-65248
NC_007796:31691:5110051100529951896Methanospirillum hungatei JF-1, complete genomePorphyromonas-type peptidyl-arginine deiminase8e-58224
NC_019940:203718:2057962057962068541059Thioflavicoccus mobilis 8321 chromosome, complete genomepeptidylarginine deiminase-like protein3e-52205
NC_007645:2408125:2409027240902724100611035Hahella chejuensis KCTC 2396, complete genomePeptidylarginine deiminase and related enzyme3e-48192
NC_009664:1434974:1456236145623614572551020Kineococcus radiotolerans SRS30216, complete genomeAgmatine deiminase3e-46186
NC_015563:4093650:4114102411410241152591158Delftia sp. Cs1-4 chromosome, complete genomeAgmatine deiminase8e-45181
NC_014640:76992:99056990561001801125Achromobacter xylosoxidans A8 chromosome, complete genomeagmatine deiminase3e-43176
NC_009667:1076718:1095345109534510964511107Ochrobactrum anthropi ATCC 49188 chromosome 1, complete sequenceagmatine deiminase1e-42174
NC_013161:1023716:1038146103814610391831038Cyanothece sp. PCC 8802, complete genomeAgmatine deiminase1e-41170
NC_011726:1023690:1038120103812010391571038Cyanothece sp. PCC 8801, complete genomeAgmatine deiminase1e-41170
NC_010572:1293786:1296025129602512971791155Streptomyces griseus subsp. griseus NBRC 13350, complete genomeputative peptidyl-arginine deiminase family protein3e-41169
NC_014033:1691822:1694938169493816959541017Prevotella ruminicola 23 chromosome, complete genomepeptidyl-arginine deiminase family protein2e-39163
NC_002950:155873:1667331667331677581026Porphyromonas gingivalis W83, complete genomehypothetical protein4e-39162
NC_015311:1827000:1827413182741318284711059Prevotella denticola F0289 chromosome, complete genomehypothetical protein3e-39162
NC_010729:265791:2766502766502776751026Porphyromonas gingivalis ATCC 33277, complete genomeputative arginine deiminase3e-39162
NC_010814:2758902:2783326278332627843481023Geobacter lovleyi SZ, complete genomeAgmatine deiminase9e-37154
NC_017080:166180:1675521675521685621011Phycisphaera mikurensis NBRC 102666, complete genomeagmatine deiminase2e-36153
NC_009615:1354122:1370301137030113713291029Parabacteroides distasonis ATCC 8503 chromosome, complete genomehypothetical protein2e-35150
NC_009727:766000:7850677850677861041038Coxiella burnetii Dugway 7E9-12, complete genome2e-32140
NC_015571:440605:451464451464452402939Porphyromonas gingivalis TDC60, complete genomeputative arginine deiminase6e-32138
NC_018721:3155579:3160575316057531618011227Psychroflexus torquis ATCC 700755 chromosome, complete genomepeptidyl-arginine deiminase, Porphyromonas-type7e-25115
NC_015738:220000:2308602308602320921233Eggerthella sp. YY7918, complete genomepeptidylarginine deiminase8e-1994.7
NC_013720:5769910:579795957979595798798840Pirellula staleyi DSM 6068, complete genomePorphyromonas-type peptidyl-arginine deiminase1e-0654.3