Pre_GI: BLASTP Hits

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Query: NC_017168:3977767:3987425 Yersinia pestis A1122 chromosome, complete genome

Start: 3987425, End: 3987685, Length: 261

Host Lineage: Yersinia pestis; Yersinia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Specific virulence factors are encoded within pathogenicity islands (PAIs) that are required for the invasive phenotype associated with Yersinia infections. One key virulence plasmid contained by the three human-specific pathogens is pCD1/pYv, which encodes a type III secretion system for the delivery of virulence proteins that contribute to internalization into the host cell. It is the causative agent of plague (bubonic and pulmonary) a devastating disease which has killed millions worldwide. The organism can be transmitted from rats to humans through the bite of an infected flea or from human-to-human through the air during widespread infection. Yersinia pestis is an extremely pathogenic organism that requires very few numbers in order to cause disease, and is often lethal if left untreated. The organism is enteroinvasive, and can survive and propagate in macrophages prior to spreading systemically throughout the host. Yersinia pestis also contains a PAI on the chromosome that is similar to the SPI-2 PAI from Salmonella that allows intracellular survival in the organism.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017265:2586729:259638725963872596647261Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,ABC-type multidrug/protein/lipid transportsystem, ATPase component4e-43172
NC_008150:844727:885250885250885510261Yersinia pestis Antiqua, complete genomehypothetical protein4e-43172
NC_003143:1630000:167138616713861671646261Yersinia pestis CO92, complete genomehypothetical protein4e-43172
NC_005810:1467772:150029115002911500551261Yersinia pestis biovar Microtus str. 91001, complete genomeABC-type multidrug/protein/lipid transport system, ATPase component4e-43172
NC_004088:2966331:297598929759892976249261Yersinia pestis KIM, complete genomehypothetical protein4e-43172
NC_008149:2802392:281205028120502812310261Yersinia pestis Nepal516, complete genomehypothetical protein4e-43172
NC_009381:1682000:169331916933191693579261Yersinia pestis Pestoides F chromosome, complete genomehypothetical protein4e-43172
NC_009708:2788855:282975428297542830014261Yersinia pseudotuberculosis IP 31758 chromosome, complete genomehypothetical protein3e-42170
NC_010159:3120642:3145370314537031477182349Yersinia pestis Angola, complete genomeRhs element Vgr protein1e-40164
NC_010634:3720214:372370537237053724298594Yersinia pseudotuberculosis PB1/+, complete genomehypothetical protein8e-38155
NC_006155:3805640:381065538106553811269615Yersinia pseudotuberculosis IP 32953, complete genome6e-38155
NC_004088:3689000:369266436926643693299636Yersinia pestis KIM, complete genomehypothetical protein3e-37153
NC_008149:3556999:356049035604903561125636Yersinia pestis Nepal516, complete genomehypothetical protein3e-37153
NC_003143:1059580:106458610645861065221636Yersinia pestis CO92, complete genomehypothetical protein3e-37153
NC_008149:3556999:356559335655933566228636Yersinia pestis Nepal516, complete genomehypothetical protein1e-32138
NC_004088:3689000:369776736977673698402636Yersinia pestis KIM, complete genomehypothetical protein1e-32138
NC_008150:317903:347836347836348471636Yersinia pestis Antiqua, complete genomehypothetical protein1e-32138
NC_005810:3917254:394895039489503949585636Yersinia pestis biovar Microtus str. 91001, complete genomeABC-type multidrug/protein/lipid transport system, ATPase component1e-32138
NC_003143:1059580:106968910696891070324636Yersinia pestis CO92, complete genomehypothetical protein1e-32138
NC_014029:1702338:174201617420161742651636Yersinia pestis Z176003 chromosome, complete genomehypothetical protein1e-32138
NC_017154:1644404:168410916841091684744636Yersinia pestis D106004 chromosome, complete genomehypothetical protein1e-32138
NC_017160:1628500:166472316647231665358636Yersinia pestis D182038 chromosome, complete genomehypothetical protein1e-32138
NC_017168:3286:349503495035585636Yersinia pestis A1122 chromosome, complete genomehypothetical protein1e-32138
NC_017265:809943:838967838967839602636Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,hypothetical protein1e-32138
NC_010159:172469:1763291763291786772349Yersinia pestis Angola, complete genomehypothetical protein3e-32137
NC_010634:3720214:372880937288093729240432Yersinia pseudotuberculosis PB1/+, complete genomerhs element Vgr protein2e-32137
NC_006155:3805640:381575738157573816278522Yersinia pseudotuberculosis IP 32953, complete genome1e-32137
NC_009708:2788855:2833254283325428356022349Yersinia pseudotuberculosis IP 31758 chromosome, complete genomeRhs element Vgr protein5e-32136
NC_008149:2802392:2815550281555028178982349Yersinia pestis Nepal516, complete genomehypothetical protein5e-32136
NC_003143:1630000:1665798166579816681462349Yersinia pestis CO92, complete genomehypothetical protein5e-32136
NC_005810:1467772:1494703149470314970512349Yersinia pestis biovar Microtus str. 91001, complete genomehypothetical protein5e-32136
NC_008150:844727:8796628796628820102349Yersinia pestis Antiqua, complete genomehypothetical protein5e-32136
NC_009381:1682000:1696819169681916991672349Yersinia pestis Pestoides F chromosome, complete genomehypothetical protein5e-32136
NC_017160:1628500:1657907165790716602552349Yersinia pestis D182038 chromosome, complete genomehypothetical protein5e-32136
NC_017168:3977767:3990925399092539932732349Yersinia pestis A1122 chromosome, complete genomehypothetical protein5e-32136
NC_004088:2966331:2979489297948929818372349Yersinia pestis KIM, complete genomehypothetical protein5e-32136
NC_017265:2586729:2599887259988726022352349Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,hypothetical protein5e-32136
NC_005810:3917254:3942261394226139446092349Yersinia pestis biovar Microtus str. 91001, complete genomehypothetical protein3e-28123
NC_017154:1644404:1677411167741116797592349Yersinia pestis D106004 chromosome, complete genomehypothetical protein3e-28123
NC_006155:3805640:3820724382072438230722349Yersinia pseudotuberculosis IP 32953, complete genomehypothetical protein3e-28123
NC_009708:874770:8969538969538993012349Yersinia pseudotuberculosis IP 31758 chromosome, complete genometype VI secretion system family protein3e-28123
NC_010634:3720214:3733805373380537361532349Yersinia pseudotuberculosis PB1/+, complete genometype VI secretion system Vgr family protein3e-28123
NC_003143:1059580:1074635107463510769832349Yersinia pestis CO92, complete genomehypothetical protein3e-28123
NC_004088:3689000:3702742370274237050902349Yersinia pestis KIM, complete genomehypothetical protein3e-28123
NC_017265:809943:8322598322598346072349Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,hypothetical protein3e-28123
NC_017168:3286:2829128291306392349Yersinia pestis A1122 chromosome, complete genomehypothetical protein3e-28123
NC_014029:1702338:1735338173533817376862349Yersinia pestis Z176003 chromosome, complete genomehypothetical protein3e-28123
NC_008150:317903:3411583411583435062349Yersinia pestis Antiqua, complete genomehypothetical protein3e-28123
NC_008149:3556999:3570618357061835729662349Yersinia pestis Nepal516, complete genomehypothetical protein3e-28123
NC_009708:915814:9471329471329498342703Yersinia pseudotuberculosis IP 31758 chromosome, complete genomeRhs element Vgr protein1e-26118
NC_010634:1755548:1790029179002917927312703Yersinia pseudotuberculosis PB1/+, complete genometype VI secretion system Vgr family protein1e-26118
NC_006155:1756000:1789798178979817925002703Yersinia pseudotuberculosis IP 32953, complete genomehypothetical protein1e-26118
NC_010634:1755548:1785427178542717879252499Yersinia pseudotuberculosis PB1/+, complete genometype VI secretion system Vgr family protein2e-26117
NC_009708:915814:9425319425319450292499Yersinia pseudotuberculosis IP 31758 chromosome, complete genomeRhs element Vgr protein2e-26117
NC_006155:1756000:1785196178519617876942499Yersinia pseudotuberculosis IP 32953, complete genomehypothetical protein2e-26117
NC_013956:4579759:4588722458872245910732352Pantoea ananatis LMG 20103 chromosome, complete genomehypothetical protein2e-2097.4
NC_012731:2302974:2308066230806623107862721Klebsiella pneumoniae NTUH-K2044 chromosome, complete genomehypothetical protein2e-1890.5
NC_009648:1487692:1492806149280614953252520Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genomehypothetical protein3e-1580.5
NC_010501:3575726:3592074359207435944372364Pseudomonas putida W619, complete genometype VI secretion system Vgr family protein3e-1270.5
NC_017060:125480:1304941304941328362343Rahnella aquatilis HX2 plasmid PRA1, complete sequenceRhs element Vgr protein2e-1064.3
NC_015062:130359:1336641336641360062343Rahnella sp. Y9602 plasmid pRAHAQ01, complete sequenceRhs element Vgr protein2e-1064.3
NC_016835:1:2739273951262388Rahnella aquatilis CIP 78.65 = ATCC 33071 plasmid pRahaq201,Rhs element Vgr protein1e-0962
NC_013961:629307:638722638722638991270Erwinia amylovora, complete genomehypothetical protein3e-0857.4
NC_013971:3117000:313231031323103132579270Erwinia amylovora ATCC 49946 chromosome, complete genomehypothetical protein3e-0857.4
NC_010611:3771778:3782184378218437854653282Acinetobacter baumannii ACICU, complete genomehypothetical protein8e-0855.8
NC_017162:3817952:3828421382842138316783258Acinetobacter baumannii 1656-2 chromosome, complete genomehypothetical protein9e-0855.5
NC_007511:1094050:1101550110155011040812532Burkholderia sp. 383 chromosome 2, complete sequenceRhs element Vgr protein2e-0754.3
NC_013282:2026083:2028766202876620311232358Cronobacter turicensis, complete genomehypothetical protein3e-0753.9
NC_015062:130359:1502231502231527452523Rahnella sp. Y9602 plasmid pRAHAQ01, complete sequenceRhs element Vgr protein3e-0753.9
NC_013282:2026083:2034389203438920355011113Cronobacter turicensis, complete genomehypothetical protein3e-0753.9
NC_008463:282565:2852132852132882723060Pseudomonas aeruginosa UCBPP-PA14, complete genomehypothetical protein5e-0753.1
NC_012721:1395417:1409851140985114122112361Burkholderia glumae BGR1 chromosome 2, complete genomehypothetical protein8e-0752.4
NC_010067:2529750:2547387254738725497442358Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein1e-0652
NC_010551:1412139:1416030141603014185612532Burkholderia ambifaria MC40-6 chromosome 1, complete sequencetype VI secretion system Vgr family protein2e-0650.8
NC_012724:1781554:1788148178814817909132766Burkholderia glumae BGR1 chromosome 1, complete genomeRhs element Vgr protein2e-0650.8
NC_005085:24623:2947429474320982625Chromobacterium violaceum ATCC 12472, complete genomeprobable vgr related protein3e-0650.4
NC_020260:263528:2676322676322699232292Cronobacter sakazakii Sp291, complete genomehypothetical protein3e-0650.4
NC_016626:400080:4137604137604155411782Burkholderia sp. YI23 plasmid byi_1p, complete sequencehypothetical protein4e-0650.1
NC_009256:1282793:1290222129022212927532532Burkholderia vietnamiensis G4 chromosome 1, complete sequenceRhs element Vgr protein4e-0650.1
NC_010717:3868000:3877381387738138788141434Xanthomonas oryzae pv. oryzae PXO99A, complete genomeRhs element Vgr protein5e-0650.1
NC_016626:400080:4048684048684075132646Burkholderia sp. YI23 plasmid byi_1p, complete sequencehypothetical protein5e-0649.7
NC_009778:259241:2635182635182656322115Enterobacter sakazakii ATCC BAA-894, complete genomehypothetical protein6e-0649.3
NC_010557:1030319:1053205105320510557362532Burkholderia ambifaria MC40-6 chromosome 3, complete sequencetype VI secretion system Vgr family protein7e-0649.3