Pre_GI: BLASTP Hits

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Query: NC_017168:2281040:2292843 Yersinia pestis A1122 chromosome, complete genome

Start: 2292843, End: 2293700, Length: 858

Host Lineage: Yersinia pestis; Yersinia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Specific virulence factors are encoded within pathogenicity islands (PAIs) that are required for the invasive phenotype associated with Yersinia infections. One key virulence plasmid contained by the three human-specific pathogens is pCD1/pYv, which encodes a type III secretion system for the delivery of virulence proteins that contribute to internalization into the host cell. It is the causative agent of plague (bubonic and pulmonary) a devastating disease which has killed millions worldwide. The organism can be transmitted from rats to humans through the bite of an infected flea or from human-to-human through the air during widespread infection. Yersinia pestis is an extremely pathogenic organism that requires very few numbers in order to cause disease, and is often lethal if left untreated. The organism is enteroinvasive, and can survive and propagate in macrophages prior to spreading systemically throughout the host. Yersinia pestis also contains a PAI on the chromosome that is similar to the SPI-2 PAI from Salmonella that allows intracellular survival in the organism.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014640:6745873:6779864677986467818461983Achromobacter xylosoxidans A8 chromosome, complete genomeNAD dependent epimerase/dehydratase family protein 87e-0858.2
NC_009484:661089:669955669955670797843Acidiphilium cryptum JF-5 chromosome, complete genomeNAD-dependent epimerase/dehydratase1e-0757.4
NC_015186:755000:762104762104762946843Acidiphilium multivorum AIU301, complete genomeNAD-dependent epimerase/dehydratase family protein3e-0859.3
NC_015942:1167785:118253711825371183442906Acidithiobacillus ferrivorans SS3 chromosome, complete genomeNAD-dependent epimerase/dehydratase2e-1170.1
NC_012483:656397:661113661113662099987Acidobacterium capsulatum ATCC 51196, complete genomeputative GDP-6-deoxy-D-lyxo-4-hexulose reductase2e-1273.6
NC_011658:3144000:316345331634533164376924Bacillus cereus AH187 chromosome, complete genomeNAD dependent epimerase/dehydratase family superfamily5e-0962
NC_011725:3231859:325285832528583253781924Bacillus cereus B4264 chromosome, complete genomeNAD dependent epimerase/dehydratase superfamily3e-0962.8
NC_011969:3106500:312561431256143126537924Bacillus cereus Q1 chromosome, complete genomeudp-glucose 4-epimerase5e-0962
NC_017200:3221508:324189332418933242816924Bacillus thuringiensis serovar finitimus YBT-020 chromosome,NAD-dependent epimerase/dehydratase family protein4e-0962.4
NC_016776:4115889:411996141199614120860900Bacteroides fragilis 638R, complete genomeputative LPS biosynthesis DNTP-hexose dehydratase-epimerase4e-1168.6
NC_017082:2355221:237324923732492374187939Bradyrhizobium sp. S23321, complete genomeputative GDP-6-deoxy-D-lyxo-4-hexulose reductase7e-1684.7
NC_014652:1091610:110799611079961108907912Caldicellulosiruptor hydrothermalis 108 chromosome, complete4e-1788.6
NC_014802:1392831:139737313973731398257885Campylobacter jejuni subsp. jejuni ICDCCJ07001 chromosome, completeWbcB1e-1067
NC_012039:412837:453616453616454569954Campylobacter lari RM2100, complete genomeADP-L-glycero-D-mannoheptose-6-epimerase2e-0653.5
NC_011832:2306341:232982923298292330779951Candidatus Methanosphaerula palustris E1-9c, complete genomeNAD-dependent epimerase/dehydratase3e-0652.8
NC_010995:4083960:4107197410719741082041008Cellvibrio japonicus Ueda107, complete genomeNAD dependent epimerase/dehydratase family superfamily3e-0756.2
NC_013161:2804228:281425428142542815162909Cyanothece sp. PCC 8802, complete genomeNAD-dependent epimerase/dehydratase5e-0755.5
NC_013037:5536433:555740055574005558296897Dyadobacter fermentans DSM 18053, complete genomeNAD-dependent epimerase/dehydratase2e-0756.6
NC_014394:3036758:305718130571813058080900Gallionella capsiferriformans ES-2 chromosome, complete genomeNAD-dependent epimerase/dehydratase9e-49193
NC_011979:2352961:236050623605062361393888Geobacter sp. FRC-32, complete genomeNAD-dependent epimerase/dehydratase4e-44178
NC_013156:431795:446720446720447634915Methanocaldococcus fervens AG86, complete genomeNAD-dependent epimerase/dehydratase4e-0652
NC_013407:1610221:161022116102211611135915Methanocaldococcus vulcanius M7, complete genomeNAD-dependent epimerase/dehydratase2e-0653.1
NC_015416:1039144:104900910490091049896888Methanosaeta concilii GP-6 chromosome, complete genomeNAD dependent epimerase/dehydratase5e-0755.1
NC_014315:1169910:118568011856801186612933Nitrosococcus watsoni C-113 chromosome, complete genomeNAD-dependent epimerase/dehydratase1e-0653.9
NC_007948:4176579:420400542040054204904900Polaromonas sp. JS666, complete genomeNAD-dependent epimerase/dehydratase4e-30131
NC_007948:4176579:419723441972344198229996Polaromonas sp. JS666, complete genomeNAD-dependent epimerase/dehydratase1e-0757
NC_008435:3915110:391813139181313919084954Rhodopseudomonas palustris BisA53, complete genomeNAD-dependent epimerase/dehydratase4e-0858.9
NC_011149:2110861:212786421278642128763900Salmonella enterica subsp. enterica serovar Agona str. SL483,CDP-abequose synthase7e-26117
NC_011205:2283438:230170323017032302542840Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853paratose synthase8e-60230
NC_011294:2156425:217468721746872175526840Salmonella enterica subsp. enterica serovar Enteritidis strparatose synthase8e-60230
NC_011274:2147427:216568921656892166528840Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91paratose synthase3e-59228
NC_016831:854973:868038868038868862825Salmonella enterica subsp. enterica serovar Gallinarum/pullorumparatose synthase3e-57221
NC_011083:2200613:221761822176182218517900Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,CDP-abequose synthase7e-26117
NC_011080:2161696:218147021814702182351882Salmonella enterica subsp. enterica serovar Newport str. SL254,CDP-abequose synthase3e-25115
NC_011147:854730:867699867699868538840Salmonella enterica subsp. enterica serovar Paratyphi A strparatose synthase2e-59228
NC_006511:854785:867754867754868593840Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCCparatose synthase2e-59228
NC_010102:861860:874901874901875800900Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein7e-26117
NC_011094:2172271:219154121915412192440900Salmonella enterica subsp. enterica serovar Schwarzengrund strCDP-abequose synthase2e-25116
NC_003198:2109775:212804021280402128879840Salmonella enterica subsp. enterica serovar Typhi str. CT18,paratose synthase1e-59229
NC_016832:861956:875018875018875842825Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,Paratose synthase6e-57221
NC_004631:862002:875049875049875888840Salmonella enterica subsp. enterica serovar Typhi Ty2, completeparatose synthase1e-59229
NC_016860:2148535:216554021655402166439900Salmonella enterica subsp. enterica serovar Typhimurium strCDP-abequose synthase7e-26117
NC_016810:2150709:216771421677142168613900Salmonella enterica subsp. enterica serovar Typhimurium strCDP-abequose synthase7e-26117
NC_016856:2204546:222155122215512222450900Salmonella enterica subsp. enterica serovar Typhimurium str. 14028SCDP-abequose synthase7e-26117
NC_017046:2150072:216707721670772167985909Salmonella enterica subsp. enterica serovar Typhimurium str. 798CDP-abequose synthase8e-26117
NC_016857:2150709:216771421677142168613900Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74CDP-abequose synthase7e-26117
NC_016863:2152739:216974421697442170643900Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1CDP-abequose synthase7e-26117
NC_003197:2152994:216999921699992170898900Salmonella typhimurium LT2, complete genomeCDP-abequose synthase7e-26117
NC_008536:812882:8219358219358238901956Solibacter usitatus Ellin6076, complete genomeNAD-dependent epimerase/dehydratase5e-0858.5
NC_020164:2329340:233202123320212332950930Staphylococcus warneri SG1, complete genomeNAD dependent epimerase/dehydratase family protein9e-0754.3
NC_015172:2628128:267061026706102671512903Syntrophobotulus glycolicus DSM 8271 chromosome, complete genomeNAD-dependent epimerase/dehydratase7e-2097.8
NC_007759:2638992:265189026518902652834945Syntrophus aciditrophicus SB, complete genomeCDP-4-dehydro-6-deoxy-D-gulose 4-reductase8e-1064.7
NC_014831:866614:868093868093869061969Thermaerobacter marianensis DSM 12885 chromosome, complete genomeNAD-dependent epimerase/dehydratase4e-0652.4
NC_006624:873525:877272877272878198927Thermococcus kodakarensis KOD1, complete genomeUDP-glucose 4-epimerase8e-0651.2
NC_015577:3113907:313490931349093135772864Treponema azotonutricium ZAS-9 chromosome, complete genomeCDP-abequose synthase1e-1170.1
NC_015500:987641:996982996982997890909Treponema brennaborense DSM 12168 chromosome, complete genomeNAD-dependent epimerase/dehydratase6e-0755.1
NC_009464:2523092:254704325470432547963921Uncultured methanogenic archaeon RC-I, complete genomeputative UDP-glucose 4-epimerase7e-0651.2
NC_008800:3330944:335441933544193355297879Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,paratose synthase1e-1997.1
NC_010159:3033989:304581230458123046669858Yersinia pestis Angola, complete genomeCDP-paratose synthetase9e-156549
NC_008150:2878450:289994128999412900798858Yersinia pestis Antiqua, complete genomeparatose synthase9e-156549
NC_017265:3240379:326186232618623262719858Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,paratose synthase9e-156549
NC_005810:872672:884534884534885331798Yersinia pestis biovar Microtus str. 91001, complete genomeparatose synthase3e-144511
NC_004088:1196875:120664612066461207503858Yersinia pestis KIM, complete genomeCDP-paratose synthetase9e-156549
NC_008149:1122693:113449611344961135353858Yersinia pestis Nepal516, complete genomeparatose synthase9e-156549
NC_009381:3094939:311641431164143117271858Yersinia pestis Pestoides F chromosome, complete genomeparatose synthase9e-156549
NC_014029:3501500:352267335226733523530858Yersinia pestis Z176003 chromosome, complete genomeparatose synthase9e-156549
NC_009708:3411153:343245734324573433314858Yersinia pseudotuberculosis IP 31758 chromosome, complete genomeCDP-paratose synthetase9e-155546
NC_006155:1191307:120310912031091203966858Yersinia pseudotuberculosis IP 32953, complete genomeparatose synthase9e-155546
NC_010634:1175404:118517411851741186031858Yersinia pseudotuberculosis PB1/+, complete genomeNAD-dependent epimerase/dehydratase9e-155546
NC_010465:3465351:348668734866873487544858Yersinia pseudotuberculosis YPIII, complete genomeNAD-dependent epimerase/dehydratase9e-155546