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Query: NC_017168:1631052:1650351 Yersinia pestis A1122 chromosome, complete genome

Start: 1650351, End: 1650527, Length: 177

Host Lineage: Yersinia pestis; Yersinia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Specific virulence factors are encoded within pathogenicity islands (PAIs) that are required for the invasive phenotype associated with Yersinia infections. One key virulence plasmid contained by the three human-specific pathogens is pCD1/pYv, which encodes a type III secretion system for the delivery of virulence proteins that contribute to internalization into the host cell. It is the causative agent of plague (bubonic and pulmonary) a devastating disease which has killed millions worldwide. The organism can be transmitted from rats to humans through the bite of an infected flea or from human-to-human through the air during widespread infection. Yersinia pestis is an extremely pathogenic organism that requires very few numbers in order to cause disease, and is often lethal if left untreated. The organism is enteroinvasive, and can survive and propagate in macrophages prior to spreading systemically throughout the host. Yersinia pestis also contains a PAI on the chromosome that is similar to the SPI-2 PAI from Salmonella that allows intracellular survival in the organism.

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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009381:222735:232579232579233202624Yersinia pestis Pestoides F chromosome, complete genomehypothetical protein2e-27120
NC_003143:4006884:401682740168274017360534Yersinia pestis CO92, complete genomehypothetical protein4e-27120
NC_014029:3958811:396875439687543969287534Yersinia pestis Z176003 chromosome, complete genomehypothetical protein4e-27120
NC_017154:3898925:390886839088683909401534Yersinia pestis D106004 chromosome, complete genomehypothetical protein4e-27120
NC_017265:4265659:427688042768804277413534Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,hypothetical protein4e-27120
NC_006155:4302826:4314102431410243154151314Yersinia pseudotuberculosis IP 32953, complete genomehypothetical protein4e-27120
NC_009708:372422:3816133816133829261314Yersinia pseudotuberculosis IP 31758 chromosome, complete genomeImpA domain-containing protein4e-27120
NC_010634:4234932:4245199424519942465121314Yersinia pseudotuberculosis PB1/+, complete genomeImpA domain-containing protein3e-27120
NC_010465:429095:4382594382594395661308Yersinia pseudotuberculosis YPIII, complete genomeImpA domain protein4e-27119
NC_008149:4053363:406376740637674063943177Yersinia pestis Nepal516, complete genomehypothetical protein1e-26118
NC_004088:266543:276946276946277122177Yersinia pestis KIM, complete genomehypothetical protein1e-26118
NC_005810:4469156:447975344797534479929177Yersinia pestis biovar Microtus str. 91001, complete genomehypothetical protein1e-26118
NC_009381:222735:242013242013242189177Yersinia pestis Pestoides F chromosome, complete genomehypothetical protein1e-26118
NC_017168:1631052:164135216413521641528177Yersinia pestis A1122 chromosome, complete genomehypothetical protein1e-26118
NC_017265:4265659:426787942678794268055177Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,hypothetical protein1e-26118
NC_012962:293976:3007953007953021411347Photorhabdus asymbiotica, complete genomehypothetical protein6e-1062.8
NC_005126:349658:379498379498380175678Photorhabdus luminescens subsp. laumondii TTO1, complete genome1e-0962
NC_014228:4331327:4336814433681443382141401Xenorhabdus nematophila ATCC 19061, complete genomeConserved Hypothetical protein with ImpA domain (probable component of SST VI cluster)4e-0857
NC_013892:274297:2885842885842899751392Xenorhabdus bovienii SS-2004 chromosome, complete genomehypothetical protein1e-0755.1