Pre_GI: BLASTP Hits

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Query: NC_017168:144000:152561 Yersinia pestis A1122 chromosome, complete genome

Start: 152561, End: 153241, Length: 681

Host Lineage: Yersinia pestis; Yersinia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Specific virulence factors are encoded within pathogenicity islands (PAIs) that are required for the invasive phenotype associated with Yersinia infections. One key virulence plasmid contained by the three human-specific pathogens is pCD1/pYv, which encodes a type III secretion system for the delivery of virulence proteins that contribute to internalization into the host cell. It is the causative agent of plague (bubonic and pulmonary) a devastating disease which has killed millions worldwide. The organism can be transmitted from rats to humans through the bite of an infected flea or from human-to-human through the air during widespread infection. Yersinia pestis is an extremely pathogenic organism that requires very few numbers in order to cause disease, and is often lethal if left untreated. The organism is enteroinvasive, and can survive and propagate in macrophages prior to spreading systemically throughout the host. Yersinia pestis also contains a PAI on the chromosome that is similar to the SPI-2 PAI from Salmonella that allows intracellular survival in the organism.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009381:720000:728554728554729234681Yersinia pestis Pestoides F chromosome, complete genomehypothetical protein2e-104378
NC_005810:4045303:405699140569914057671681Yersinia pestis biovar Microtus str. 91001, complete genomehypothetical protein2e-104378
NC_017059:1727095:173115517311551731733579Rhodospirillum photometricum DSM 122, complete genomePadR family transcriptional regulator9e-25113
NC_009484:2442923:245189424518942452499606Acidiphilium cryptum JF-5 chromosome, complete genomePadR-like family transcriptional regulator2e-22105
NC_015186:2719645:272861527286152729205591Acidiphilium multivorum AIU301, complete genomePadR family transcriptional regulator5e-22104
NC_014623:9089998:909151390915139092082570Stigmatella aurantiaca DW4/3-1 chromosome, complete genomePadR family transcriptional regulator1e-21103
NC_009436:3807420:382508438250843825629546Enterobacter sp. 638, complete genomePadR family transcriptional regulator5e-2097.8
NC_004578:4708220:472304647230464723645600Pseudomonas syringae pv. tomato str. DC3000, complete genomehypothetical protein4e-1995.1
NC_010515:1491590:150659215065921507305714Burkholderia cenocepacia MC0-3 chromosome 2, complete sequencetranscriptional regulator, PadR-like family5e-1994.4
NC_014118:1083492:109634410963441097183840Burkholderia sp. CCGE1002 chromosome chromosome 2, completetranscriptional regulator, PadR-like family9e-1993.6
NC_009075:15017:207712077121475705Burkholderia pseudomallei 668 chromosome II, complete sequencetranscriptional regulator, PadR family2e-1892.8
NC_013353:3853082:389240538924053893028624Escherichia coli O103:H2 str. 12009, complete genometranscriptional regulator2e-1892.4
AP010958:3853082:389240538924053893028624Escherichia coli O103:H2 str. 12009 DNA, complete genomepredicted transcriptional regulator2e-1892.4
NC_010170:4196197:420326942032694203949681Bordetella petrii, complete genometranscriptional regulatro, PadR-like9e-1580.5
NC_004369:2968251:299762429976242998268645Corynebacterium efficiens YS-314, complete genomehypothetical protein5e-1374.3
NC_013729:6217500:622935962293596230051693Kribbella flavida DSM 17836, complete genometranscriptional regulator, PadR-like family5e-1271.2
NC_010943:493002:497118497118497678561Stenotrophomonas maltophilia K279a, complete genomeputative PadR-family transcriptional regulator5e-1167.8
NC_015947:444466:447061447061447621561Burkholderia sp. JV3 chromosome, complete genomePadR-like family transcriptional regulator1e-1066.6
NC_011071:429204:432610432610433170561Stenotrophomonas maltophilia R551-3, complete genometranscriptional regulator, PadR-like family2e-1065.9
NC_014210:3817948:382363438236343824467834Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 chromosome,transcriptional regulator, PadR-like family2e-0963.2
NC_017208:1050414:106205310620531062385333Bacillus thuringiensis serovar chinensis CT-43 chromosome, completePadR family transcriptional regulator2e-0962.8
NC_011725:1032500:104332810433281043660333Bacillus cereus B4264 chromosome, complete genomePadR family transcriptional regulator2e-0962.8
NC_004722:1008500:101926110192611019602342Bacillus cereus ATCC 14579, complete genomeTranscriptional regulator, PadR family2e-0962.8
NC_014171:1018338:102901910290191029351333Bacillus thuringiensis BMB171 chromosome, complete genomePadR family transcriptional regulator3e-0962.4
NC_013642:942767:957647957647958099453Thermotoga naphthophila RKU-10, complete genometranscriptional regulator, PadR-like family1e-0860.5
NC_010483:642577:662384662384662836453Thermotoga sp. RQ2, complete genometranscriptional regulator, PadR-like family1e-0860.1
NC_010184:1017000:102748510274851027817333Bacillus weihenstephanensis KBAB4, complete genometranscriptional regulator, PadR-like family2e-0859.3
NC_009720:4367584:438953543895354389993459Xanthobacter autotrophicus Py2, complete genomePadR-like family transcriptional regulator3e-0858.9
NC_019897:700332:733396733396733758363Thermobacillus composti KWC4 chromosome, complete genometranscriptional regulator3e-0858.9
NC_015474:72103:752397523975691453Pyrococcus sp. NA2 chromosome, complete genomeTranscription regulator, PadR-like family7e-0754.3
NC_009328:293000:348394348394348717324Geobacillus thermodenitrificans NG80-2 chromosome, complete genometranscriptional regulator3e-0652.4
NC_003888:3111998:311595731159573116334378Streptomyces coelicolor A3(2), complete genomehypothetical protein4e-0651.6
NC_015690:6595395:660345166034516603786336Paenibacillus mucilaginosus KNP414 chromosome, complete genomePadR-like family transcriptional regulator7e-0650.8