Pre_GI: BLASTN Hits

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Query: NC_017160:2740870 Yersinia pestis D182038 chromosome, complete genome

Start: 2740870, End: 2760203, Length: 19334

Host Lineage: Yersinia pestis; Yersinia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Specific virulence factors are encoded within pathogenicity islands (PAIs) that are required for the invasive phenotype associated with Yersinia infections. One key virulence plasmid contained by the three human-specific pathogens is pCD1/pYv, which encodes a type III secretion system for the delivery of virulence proteins that contribute to internalization into the host cell. It is the causative agent of plague (bubonic and pulmonary) a devastating disease which has killed millions worldwide. The organism can be transmitted from rats to humans through the bite of an infected flea or from human-to-human through the air during widespread infection. Yersinia pestis is an extremely pathogenic organism that requires very few numbers in order to cause disease, and is often lethal if left untreated. The organism is enteroinvasive, and can survive and propagate in macrophages prior to spreading systemically throughout the host. Yersinia pestis also contains a PAI on the chromosome that is similar to the SPI-2 PAI from Salmonella that allows intracellular survival in the organism.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_008149:24111612411161243409922939Yersinia pestis Nepal516, complete genome029770BLASTN svgBLASTP svg
NC_005810:26134562613456263609922644Yersinia pestis biovar Microtus str. 91001, complete genome029770BLASTN svgBLASTP svg
NC_004088:18018191801819182425322435Yersinia pestis KIM, complete genome029770BLASTN svgBLASTP svg
NC_003143:28493772849377287209922723Yersinia pestis CO92, complete genome029770BLASTN svgBLASTP svg
NC_010159:18614651861465188409922635Yersinia pestis Angola, complete genome029730BLASTN svgBLASTP svg
NC_010465:17240001724000174609922100Yersinia pseudotuberculosis YPIII, complete genome028940BLASTN svgBLASTP svg
NC_010634:29600002960000298209922100Yersinia pseudotuberculosis PB1/+, complete genome026650BLASTN svgBLASTP svg
NC_006155:30407693040769306409923331Yersinia pseudotuberculosis IP 32953, complete genome026620BLASTN svgBLASTP svg
NC_015224:31910003191000321042819429Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,010060BLASTN svgBLASTP svg
AC_000091:23796702379670240484125172Escherichia coli W3110 DNA, complete genome0821BLASTN svgBLASTP svg
NC_000913:23739842373984239819324210Escherichia coli K12, complete genome0821BLASTN svgBLASTP svg
NC_010473:24658442465844248995824115Escherichia coli str. K-12 substr. DH10B, complete genome0821BLASTN svgBLASTP svg
NC_014228:28120002812000283429522296Xenorhabdus nematophila ATCC 19061, complete genome0821BLASTN svgBLASTP svg
NC_010554:18710001871000189502424025Proteus mirabilis HI4320, complete genome0678BLASTN svgBLASTP svg
NC_012214:14384761438476146005421579Erwinia pyrifoliae Ep1/96, complete genome3e-141509BLASTN svgBLASTP svg
NC_013961:24411482441148246091119764Erwinia amylovora, complete genome7e-130472BLASTN svgBLASTP svg
NC_010694:13242501324250134559221343Erwinia tasmaniensis, complete genome6e-115422BLASTN svgBLASTP svg
NC_003143:28045002804500282209917600Yersinia pestis CO92, complete genome6e-87329BLASTN svgBLASTP svg
NC_004088:1851500*1851500188954638047Yersinia pestis KIM, complete genome6e-87329BLASTN svgBLASTP svg
NC_005810:25496802549680258809938420Yersinia pestis biovar Microtus str. 91001, complete genome6e-87329BLASTN svgBLASTP svg
NC_010159:18185001818500183609917600Yersinia pestis Angola, complete genome6e-87329BLASTN svgBLASTP svg
NC_003143:33468343346834337009923266Yersinia pestis CO92, complete genome1e-85325BLASTN svgBLASTP svg
NC_004088:16229411622941164556522625Yersinia pestis KIM, complete genome1e-85325BLASTN svgBLASTP svg
NC_005810:29053622905362292838523024Yersinia pestis biovar Microtus str. 91001, complete genome1e-85325BLASTN svgBLASTP svg
NC_006155:32127963212796323445221657Yersinia pseudotuberculosis IP 32953, complete genome1e-85325BLASTN svgBLASTP svg
NC_008149:15565811556581157548818908Yersinia pestis Nepal516, complete genome1e-85325BLASTN svgBLASTP svg
NC_008150:24518722451872247509923228Yersinia pestis Antiqua, complete genome1e-85325BLASTN svgBLASTP svg
NC_010159:28784992878499290014121643Yersinia pestis Angola, complete genome1e-85325BLASTN svgBLASTP svg
NC_010465:15506171550617157325522639Yersinia pseudotuberculosis YPIII, complete genome1e-85325BLASTN svgBLASTP svg
NC_006155:29795002979500301649636997Yersinia pseudotuberculosis IP 32953, complete genome4e-85323BLASTN svgBLASTP svg
NC_006155:11913071191307123066739361Yersinia pseudotuberculosis IP 32953, complete genome4e-85323BLASTN svgBLASTP svg
NC_005810:87267287267291210839437Yersinia pestis biovar Microtus str. 91001, complete genome4e-85323BLASTN svgBLASTP svg
NC_004088:22272782227278224825620979Yersinia pestis KIM, complete genome4e-85323BLASTN svgBLASTP svg
NC_004088:11968751196875123427537401Yersinia pestis KIM, complete genome4e-85323BLASTN svgBLASTP svg
NC_008149:1842500*1842500188064438145Yersinia pestis Nepal516, complete genome4e-85323BLASTN svgBLASTP svg
NC_008150:1705152*1705152174460539454Yersinia pestis Antiqua, complete genome4e-85323BLASTN svgBLASTP svg
NC_008150:43737224373722439711823397Yersinia pestis Antiqua, complete genome4e-85323BLASTN svgBLASTP svg
NC_010159:12880001288000132559537596Yersinia pestis Angola, complete genome4e-85323BLASTN svgBLASTP svg
NC_010159:22523802252380227191719538Yersinia pestis Angola, complete genome4e-85323BLASTN svgBLASTP svg
NC_010465:22828742282874230925826385Yersinia pseudotuberculosis YPIII, complete genome4e-85323BLASTN svgBLASTP svg
NC_010634:11754041175404121321037807Yersinia pseudotuberculosis PB1/+, complete genome4e-85323BLASTN svgBLASTP svg
NC_010634:28946312894631293584741217Yersinia pseudotuberculosis PB1/+, complete genome4e-85323BLASTN svgBLASTP svg
NC_006155:35961203596120363277836659Yersinia pseudotuberculosis IP 32953, complete genome2e-84321BLASTN svgBLASTP svg
NC_008150:25996612599661262209922439Yersinia pestis Antiqua, complete genome2e-84321BLASTN svgBLASTP svg
NC_010159:409500*40950045168242183Yersinia pestis Angola, complete genome2e-84321BLASTN svgBLASTP svg
NC_010634:3269010*3269010329227823269Yersinia pseudotuberculosis PB1/+, complete genome2e-84321BLASTN svgBLASTP svg
NC_010634:35098803509880354653836659Yersinia pseudotuberculosis PB1/+, complete genome2e-84321BLASTN svgBLASTP svg
NC_003143:87536787536791053535169Yersinia pestis CO92, complete genome2e-83317BLASTN svgBLASTP svg
NC_004088:35053833505383354055935177Yersinia pestis KIM, complete genome2e-83317BLASTN svgBLASTP svg
NC_008149:33732293373229340909935871Yersinia pestis Nepal516, complete genome2e-83317BLASTN svgBLASTP svg
NC_010634:31291743129174315220423031Yersinia pseudotuberculosis PB1/+, complete genome2e-83317BLASTN svgBLASTP svg
NC_010634:28108152810815283272221908Yersinia pseudotuberculosis PB1/+, complete genome2e-80307BLASTN svgBLASTP svg
NC_006155:28938022893802291787224071Yersinia pseudotuberculosis IP 32953, complete genome2e-80307BLASTN svgBLASTP svg
NC_003143:31159333115933313845922527Yersinia pestis CO92, complete genome3e-76293BLASTN svgBLASTP svg
NC_004088:12657301265730129020024471Yersinia pestis KIM, complete genome3e-76293BLASTN svgBLASTP svg
NC_005810:12309761230976125037019395Yersinia pestis biovar Microtus str. 91001, complete genome3e-76293BLASTN svgBLASTP svg
NC_008149:11956141195614122004824435Yersinia pestis Nepal516, complete genome3e-76293BLASTN svgBLASTP svg
NC_008150:28226892822689284340720719Yersinia pestis Antiqua, complete genome3e-76293BLASTN svgBLASTP svg
NC_004347:1038253*1038253107053732285Shewanella oneidensis MR-1, complete genome2e-59238BLASTN svgBLASTP svg
NC_010634:33680003368000339029322294Yersinia pseudotuberculosis PB1/+, complete genome2e-53218BLASTN svgBLASTP svg
NC_006155:34564883456488347575719270Yersinia pseudotuberculosis IP 32953, complete genome2e-53218BLASTN svgBLASTP svg
NC_018419:86250086250088609923600Secondary endosymbiont of Ctenarytaina eucalypti chromosome,2e-46194BLASTN svgBLASTP svg
NC_014259:33690003369000338959720598Acinetobacter sp. DR1 chromosome, complete genome5e-38167BLASTN svgBLASTP svg
CP002185:4750571*4750571477251221942Escherichia coli W, complete genome5e-38167BLASTN svgBLASTP svg
NC_008563:49051864905186492360518420Escherichia coli APEC O1, complete genome1e-35159BLASTN svgBLASTP svg
NC_015224:10673901067390110671739328Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,2e-34155BLASTN svgBLASTP svg
NC_010611:79735179735182014222792Acinetobacter baumannii ACICU, complete genome8e-31143BLASTN svgBLASTP svg
NC_009085:89360189360191657222972Acinetobacter baumannii ATCC 17978, complete genome1e-29139BLASTN svgBLASTP svg
NC_015224:27903727903730366824632Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,2e-28135BLASTN svgBLASTP svg
NC_015224:27019142701914272426222349Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,2e-28135BLASTN svgBLASTP svg
NC_010465:14271701427170145224325074Yersinia pseudotuberculosis YPIII, complete genome1e-26129BLASTN svgBLASTP svg
NC_008150:25747942574794259632821535Yersinia pestis Antiqua, complete genome1e-26129BLASTN svgBLASTP svg
NC_005810:3021913*3021913304567123759Yersinia pestis biovar Microtus str. 91001, complete genome1e-26129BLASTN svgBLASTP svg
NC_003143:31912463191246321275521510Yersinia pestis CO92, complete genome1e-26129BLASTN svgBLASTP svg
NC_006155:3779381*3779381380559426214Yersinia pseudotuberculosis IP 32953, complete genome7e-25123BLASTN svgBLASTP svg
NC_010634:3692321*3692321371595823638Yersinia pseudotuberculosis PB1/+, complete genome7e-25123BLASTN svgBLASTP svg
NC_011080:47032664703266472876525500Salmonella enterica subsp. enterica serovar Newport str. SL254,7e-25123BLASTN svgBLASTP svg
NC_006905:4638707*4638707467273934033Salmonella enterica subsp. enterica serovar Choleraesuis str1e-20109BLASTN svgBLASTP svg
NC_005966:71559171559173850722917Acinetobacter sp. ADP1, complete genome1e-20109BLASTN svgBLASTP svg
NC_010465:62348*6234810809945752Yersinia pseudotuberculosis YPIII, complete genome7e-19103BLASTN svgBLASTP svg
NC_008150:4601202*4601202462030019099Yersinia pestis Antiqua, complete genome7e-19103BLASTN svgBLASTP svg
NC_007204:69697269697272009923128Psychrobacter arcticus 273-4, complete genome7e-19103BLASTN svgBLASTP svg
NC_008149:36481393648139368280234664Yersinia pestis Nepal516, complete genome1e-1799.6BLASTN svgBLASTP svg
NC_008150:37119533711953374731835366Yersinia pestis Antiqua, complete genome1e-1799.6BLASTN svgBLASTP svg
NC_015224:13910881391088142166930582Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,2e-1695.6BLASTN svgBLASTP svg
NC_015224:38203383820338386215341816Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,1e-1489.7BLASTN svgBLASTP svg
NC_015224:17031301703130172897125842Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,1e-1489.7BLASTN svgBLASTP svg
NC_003143:67562267562269837822757Yersinia pestis CO92, complete genome4e-1487.7BLASTN svgBLASTP svg
NC_004088:39238043923804394664622843Yersinia pestis KIM, complete genome4e-1487.7BLASTN svgBLASTP svg
NC_005810:32727653272765329109918335Yersinia pestis biovar Microtus str. 91001, complete genome4e-1487.7BLASTN svgBLASTP svg
NC_006155:40620004062000408523223233Yersinia pseudotuberculosis IP 32953, complete genome4e-1487.7BLASTN svgBLASTP svg
NC_008149:587689*58768961062122933Yersinia pestis Nepal516, complete genome4e-1487.7BLASTN svgBLASTP svg
NC_008150:34958513495851351954723697Yersinia pestis Antiqua, complete genome4e-1487.7BLASTN svgBLASTP svg
NC_010159:10719371071937109241320477Yersinia pestis Angola, complete genome4e-1487.7BLASTN svgBLASTP svg
NC_010465:66020766020767915818952Yersinia pseudotuberculosis YPIII, complete genome4e-1487.7BLASTN svgBLASTP svg
NC_010634:40011544001154402548424331Yersinia pseudotuberculosis PB1/+, complete genome4e-1487.7BLASTN svgBLASTP svg
NC_010465:80424980424984108836840Yersinia pseudotuberculosis YPIII, complete genome6e-1383.8BLASTN svgBLASTP svg
NC_015224:3225000*3225000325159926600Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,1e-1179.8BLASTN svgBLASTP svg
NC_015224:3892972*3892972393636443393Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,1e-1179.8BLASTN svgBLASTP svg
NC_020075:59048159048160950219022Candidatus Blochmannia chromaiodes str. 640, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_015224:32917363291736331359921864Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,2e-1075.8BLASTN svgBLASTP svg
NC_007292:58691758691761009923183Candidatus Blochmannia pennsylvanicus str. BPEN, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_004061:16637516637518719720823Buchnera aphidicola str. Sg (Schizaphis graminum), complete genome6e-1073.8BLASTN svgBLASTP svg
NC_015224:35875003587500361767930180Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,6e-1073.8BLASTN svgBLASTP svg
NC_010814:3332088*3332088335178319696Geobacter lovleyi SZ, complete genome2e-0971.9BLASTN svgBLASTP svg
NC_012691:24140424140426512723724Tolumonas auensis DSM 9187, complete genome9e-0969.9BLASTN svgBLASTP svg
NC_011145:14357421435742145821622475Anaeromyxobacter sp. K, complete genome9e-0969.9BLASTN svgBLASTP svg
NC_008702:1514707*1514707153954024834Azoarcus sp. BH72, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_015224:14402831440283145849618214Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,4e-0867.9BLASTN svgBLASTP svg
NC_015662:110950*11095013012219173Buchnera aphidicola (Cinara tujafilina) chromosome, complete4e-0867.9BLASTN svgBLASTP svg
NC_015731:30778423077842310330625465Nitrosomonas sp. Is79A3 chromosome, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_003143:41057544105754412910623353Yersinia pestis CO92, complete genome6e-0763.9BLASTN svgBLASTP svg
NC_004088:17977517977520177522001Yersinia pestis KIM, complete genome6e-0763.9BLASTN svgBLASTP svg
NC_004578:38173303817330384200124672Pseudomonas syringae pv. tomato str. DC3000, complete genome6e-0763.9BLASTN svgBLASTP svg
NC_005810:43811824381182440352322342Yersinia pestis biovar Microtus str. 91001, complete genome6e-0763.9BLASTN svgBLASTP svg
NC_006155:42106064210606423298922384Yersinia pseudotuberculosis IP 32953, complete genome6e-0763.9BLASTN svgBLASTP svg
NC_008149:39665863966586398859522010Yersinia pestis Nepal516, complete genome6e-0763.9BLASTN svgBLASTP svg
NC_008150:41408044140804416050419701Yersinia pestis Antiqua, complete genome6e-0763.9BLASTN svgBLASTP svg
NC_009379:10347401034740105427819539Polynucleobacter sp. QLW-P1DMWA-1, complete genome6e-0763.9BLASTN svgBLASTP svg
NC_010159:12086991208699123266623968Yersinia pestis Angola, complete genome6e-0763.9BLASTN svgBLASTP svg
NC_010465:52264952264954139418746Yersinia pseudotuberculosis YPIII, complete genome6e-0763.9BLASTN svgBLASTP svg
NC_010634:41507634150763417017019408Yersinia pseudotuberculosis PB1/+, complete genome6e-0763.9BLASTN svgBLASTP svg
NC_014815:658893*65889368838329491Micromonospora sp. L5 chromosome, complete genome6e-0763.9BLASTN svgBLASTP svg
NC_002528:148274*14827417635828085Buchnera aphidicola str. APS (Acyrthosiphon pisum), complete2e-0661.9BLASTN svgBLASTP svg
NC_014972:23282282328228236343935212Desulfobulbus propionicus DSM 2032 chromosome, complete genome2e-0661.9BLASTN svgBLASTP svg
NC_015224:17638481763848179825034403Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,9e-0660BLASTN svgBLASTP svg
NC_014909:540000*54000056451024511Candidatus Blochmannia vafer str. BVAF chromosome, complete genome9e-0660BLASTN svgBLASTP svg
NC_013510:4960500*4960500498486224363Thermomonospora curvata DSM 43183, complete genome9e-0660BLASTN svgBLASTP svg
NC_007760:28974092897409291699319585Anaeromyxobacter dehalogenans 2CP-C, complete genome9e-0660BLASTN svgBLASTP svg
NC_005061:52470452470454944624743Candidatus Blochmannia floridanus, complete genome9e-0660BLASTN svgBLASTP svg