Pre_GI: BLASTP Hits

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Query: NC_017160:676249:685281 Yersinia pestis D182038 chromosome, complete genome

Start: 685281, End: 685907, Length: 627

Host Lineage: Yersinia pestis; Yersinia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Specific virulence factors are encoded within pathogenicity islands (PAIs) that are required for the invasive phenotype associated with Yersinia infections. One key virulence plasmid contained by the three human-specific pathogens is pCD1/pYv, which encodes a type III secretion system for the delivery of virulence proteins that contribute to internalization into the host cell. It is the causative agent of plague (bubonic and pulmonary) a devastating disease which has killed millions worldwide. The organism can be transmitted from rats to humans through the bite of an infected flea or from human-to-human through the air during widespread infection. Yersinia pestis is an extremely pathogenic organism that requires very few numbers in order to cause disease, and is often lethal if left untreated. The organism is enteroinvasive, and can survive and propagate in macrophages prior to spreading systemically throughout the host. Yersinia pestis also contains a PAI on the chromosome that is similar to the SPI-2 PAI from Salmonella that allows intracellular survival in the organism.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017265:3790750:379784037978403798466627Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,hypothetical protein1e-118425
NC_010159:1071937:107824710782471078873627Yersinia pestis Angola, complete genome1e-118425
NC_008149:587689:598965598965599591627Yersinia pestis Nepal516, complete genomehypothetical protein1e-118425
NC_008150:3495851:350537935053793506005627Yersinia pestis Antiqua, complete genomehypothetical protein1e-118425
NC_009381:460358:469402469402470028627Yersinia pestis Pestoides F chromosome, complete genomehypothetical protein1e-118425
NC_014029:729675:740944740944741570627Yersinia pestis Z176003 chromosome, complete genomehypothetical protein1e-118425
NC_017154:671816:683096683096683722627Yersinia pestis D106004 chromosome, complete genomehypothetical protein1e-118425
NC_005810:3272765:328026732802673280890624Yersinia pestis biovar Microtus str. 91001, complete genomehypothetical protein1e-116418
NC_003143:675622:687471687471688061591Yersinia pestis CO92, complete genomehypothetical protein5e-111399
NC_006155:4062000:407107340710734071705633Yersinia pseudotuberculosis IP 32953, complete genomehypothetical protein2e-106384
NC_010634:4001154:401127940112794011911633Yersinia pseudotuberculosis PB1/+, complete genomeYheO domain-containing protein2e-106384
NC_010465:660207:667709667709668341633Yersinia pseudotuberculosis YPIII, complete genomeYheO domain protein2e-106384
NC_009708:633054:640556640556641188633Yersinia pseudotuberculosis IP 31758 chromosome, complete genomehypothetical protein2e-106384
NC_014328:3294086:331075033107503311400651Clostridium ljungdahlii ATCC 49587 chromosome, complete genomehypothetical protein3e-26118
NC_018870:2479114:248606524860652486703639Thermacetogenium phaeum DSM 12270 chromosome, complete genomeYheO domain-containing protein4e-25114
NC_010718:1865992:186743818674381868103666Natranaerobius thermophilus JW/NM-WN-LF, complete genomeYheO domain protein1e-23109
NC_015873:380485:408787408787409494708Megasphaera elsdenii DSM 20460, complete genomeYheO-like protein1e-21103
NC_016047:2631511:264125326412532641912660Bacillus subtilis subsp. spizizenii TU-B-10 chromosome, completeprotein DctR2e-1995.9
CP002207:1538782:155778115577811558431651Bacillus atrophaeus 1942, complete genometranscriptional regulator2e-1995.9
NC_014639:1538782:155778115577811558431651Bacillus atrophaeus 1942 chromosome, complete genometranscriptional regulator2e-1995.9
NC_006322:2658587:267102426710242671689666Bacillus licheniformis ATCC 14580, complete genomeDctR6e-1994
NC_006270:2657726:267016326701632670828666Bacillus licheniformis ATCC 14580, complete genomehypothetical DNA binding protein6e-1994
NC_014023:24000:256302563026292663Bacillus megaterium QM B1551 plasmid pBM700, complete sequencehypothetical protein1e-1893.2
NC_013093:2895511:289850528985052899167663Actinosynnema mirum DSM 43827, complete genomeYheO domain protein2e-1892
NC_015737:2050219:206413120641312064769639Clostridium sp. SY8519, complete genomehypothetical protein3e-1891.7
NC_015589:7678:174131741318183771Desulfotomaculum ruminis DSM 2154 chromosome, complete genomeYheO-like domain-containing protein2e-1789.4
NC_013385:90331:986709867099344675Ammonifex degensii KC4, complete genomeYheO domain protein9e-1786.7
NC_017265:1715035:173808417380841738761678Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,putative DNA-binding protein3e-1685.1
NC_005810:1976000:199793019979301998607678Yersinia pestis biovar Microtus str. 91001, complete genomeputative DNA-binding protein3e-1685.1
NC_003143:1880000:190164819016481902325678Yersinia pestis CO92, complete genomeputative DNA-binding protein3e-1685.1
NC_014323:292958:307957307957308613657Herbaspirillum seropedicae SmR1 chromosome, complete genomehypothetical protein1e-1479.7
NC_014330:768232:803531803531804184654Brachyspira pilosicoli 95/1000 chromosome, complete genomehypothetical protein2e-1479
NC_018604:2253539:226632122663212266974654Brachyspira pilosicoli WesB complete genomeYheO domain protein2e-1479
NC_019908:2401577:241691724169172417570654Brachyspira pilosicoli P43/6/78 chromosome, complete genomehypothetical protein2e-1479
NC_013508:3387272:340979634097963410512717Edwardsiella tarda EIB202, complete genomeYheO domain protein4e-1477.8
NC_010519:2033980:204929120492912049959669Haemophilus somnus 2336 chromosome, complete genomeYheO domain-containing protein6e-1477.4
NC_008309:1851189:186828118682811868949669Haemophilus somnus 129PT, complete genomehypothetical protein6e-1477.4
NC_012225:47800:720617206172714654Brachyspira hyodysenteriae WA1, complete genomehypothetical protein containing PAS domain7e-1477
NC_016818:362548:363672363672364394723Rahnella aquatilis CIP 78.65 = ATCC 33071 chromosome, completehypothetical protein1e-1376.6
NC_015138:201323:204550204550205182633Acidovorax avenae subsp. avenae ATCC 19860 chromosome, completeYheO-like domain-containing protein1e-1376.6
NC_017243:2190000:222037622203762221029654Brachyspira intermedia PWS/A chromosome, complete genomehypothetical protein2e-1375.5
NC_008752:166877:168138168138168770633Acidovorax avenae subsp. citrulli AAC00-1, complete genomeYheO domain protein5e-1374.3
NC_020211:379000:392352392352392978627Serratia marcescens WW4, complete genomeputative DNA-binding protein2e-1272.4
NC_016642:1234500:123646212364621237160699Pseudovibrio sp. FO-BEG1 chromosome, complete genomeYheO domain-containing protein8e-1270.5
NC_014150:2994000:300882030088203009473654Brachyspira murdochii DSM 12563 chromosome, complete genomeYheO domain protein1e-1169.7
NC_018720:47984:533545335454181828Bifidobacterium asteroides PRL2011 chromosome, complete genomeYheO-like protein2e-1169.3
NC_006351:2759708:279517027951702795802633Burkholderia pseudomallei K96243 chromosome 2, complete sequencehypothetical protein2e-1168.9
NC_007511:1681764:168496116849611685599639Burkholderia sp. 383 chromosome 2, complete sequencehypothetical protein3e-1065.1
NC_002516:4321000:432494843249484325580633Pseudomonas aeruginosa PAO1, complete genomehypothetical protein8e-0650.4
NC_008463:1188951:120005712000571200689633Pseudomonas aeruginosa UCBPP-PA14, complete genomehypothetical protein9e-0650.4