Pre_GI: BLASTP Hits

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Query: NC_017160:4508000:4527070 Yersinia pestis D182038 chromosome, complete genome

Start: 4527070, End: 4528389, Length: 1320

Host Lineage: Yersinia pestis; Yersinia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Specific virulence factors are encoded within pathogenicity islands (PAIs) that are required for the invasive phenotype associated with Yersinia infections. One key virulence plasmid contained by the three human-specific pathogens is pCD1/pYv, which encodes a type III secretion system for the delivery of virulence proteins that contribute to internalization into the host cell. It is the causative agent of plague (bubonic and pulmonary) a devastating disease which has killed millions worldwide. The organism can be transmitted from rats to humans through the bite of an infected flea or from human-to-human through the air during widespread infection. Yersinia pestis is an extremely pathogenic organism that requires very few numbers in order to cause disease, and is often lethal if left untreated. The organism is enteroinvasive, and can survive and propagate in macrophages prior to spreading systemically throughout the host. Yersinia pestis also contains a PAI on the chromosome that is similar to the SPI-2 PAI from Salmonella that allows intracellular survival in the organism.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_008150:4634695:4649076464907646503951320Yersinia pestis Antiqua, complete genomexylose isomerase0921
NC_010465:62348:6234862348636671320Yersinia pseudotuberculosis YPIII, complete genomexylose isomerase0921
NC_008800:4488112:4509849450984945111681320Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,xylose isomerase0879
NC_015224:4426167:4444682444468244460011320Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,xylose isomerase0866
NC_006905:3780000:3800105380010538014271323Salmonella enterica subsp. enterica serovar Choleraesuis strxylose isomerase0820
NC_012731:600518:6575606575606588791320Klebsiella pneumoniae NTUH-K2044 chromosome, complete genomexylose isomerase0801
NC_011283:4966471:4968123496812349694421320Klebsiella pneumoniae 342 chromosome, complete genomexylose isomerase0799
NC_013850:4829455:4831108483110848324271320Klebsiella variicola At-22 chromosome, complete genomexylose isomerase0797
NC_014837:33014:5554855548568701323Pantoea sp. At-9b chromosome, complete genomexylose isomerase0761
NC_007952:444616:4624634624634637851323Burkholderia xenovorans LB400 chromosome 2, complete sequenceXylose isomerase0641
NC_018644:637497:6408766408766421831308Alpha proteobacterium HIMB59 chromosome, complete genomeD-xylose isomerase1e-144513
NC_015732:3105649:3105649310564931069921344Spirochaeta caldaria DSM 7334 chromosome, complete genomeXylose isomerase2e-139496
NC_011898:3973627:3990923399092339922421320Clostridium cellulolyticum H10, complete genomexylose isomerase1e-139496
NC_010320:143109:1506181506181519341317Thermoanaerobacter sp. X514 chromosome, complete genomexylose isomerase6e-135481
NC_014538:187747:1904841904841918001317Thermoanaerobacter sp. X513 chromosome, complete genomexylose isomerase6e-135481
NC_011978:699500:7169587169587182921335Thermotoga neapolitana DSM 4359, complete genomeXylose isomerase8e-135480
NC_017195:1852935:1873091187309118744281338Bacillus subtilis subsp. subtilis str. RO-NN-1 chromosome, completexylose isomerase2e-128459
NC_014650:2143033:2158878215887821602031326Geobacillus sp. Y4.1MC1 chromosome, complete genomexylose isomerase3e-127455
NC_006510:1901954:1901954190195419032911338Geobacillus kaustophilus HTA426, complete genomexylose isomerase2e-124446
NC_020272:2077795:2099488209948821008251338Bacillus amyloliquefaciens IT-45, complete genomexylose isomerase2e-124446
NC_020410:1781884:1798834179883418001711338Bacillus amyloliquefaciens subsp. plantarum UCMB5036 completexylose isomerase4e-124445
NC_017188:1567000:1592862159286215941991338Bacillus amyloliquefaciens TA208 chromosome, complete genomexylose isomerase3e-124445
NC_017190:1832402:1848585184858518499221338Bacillus amyloliquefaciens LL3 chromosome, complete genomeXylose isomerase3e-124445
NC_017191:1568369:1594166159416615955031338Bacillus amyloliquefaciens XH7 chromosome, complete genomexylose isomerase3e-124445
NC_019896:2158223:2176407217640721777441338Bacillus subtilis subsp. subtilis str. BSP1 chromosome, completexylose isomerase5e-124444
NC_009725:1787262:1801447180144718027841338Bacillus amyloliquefaciens FZB42, complete genomeXylA6e-124444
NC_020244:1875834:1897797189779718991341338Bacillus subtilis XF-1, complete genomexylose isomerase1e-123443
NC_019842:1847081:1860980186098018623171338Bacillus amyloliquefaciens subsp. plantarum AS43.3 chromosome,xylose isomerase2e-123442
NC_010003:225420:2324592324592337751317Petrotoga mobilis SJ95, complete genomexylose isomerase2e-123442
NC_014976:17909:1790917909192461338Bacillus subtilis BSn5 chromosome, complete genomexylose isomerase4e-123441
NC_000964:1873398:1891116189111618924531338Bacillus subtilis subsp. subtilis str. 168, complete genomexylose isomerase5e-123441
NC_020210:1908000:1909932190993219112691338Geobacillus sp. GHH01, complete genomexylose isomerase6e-123441
NC_014206:1745203:1766446176644617677831338Geobacillus sp. C56-T3 chromosome, complete genomexylose isomerase2e-122439
NC_010162:7620000:7625761762576176270921332Sorangium cellulosum 'So ce 56', complete genomexylose isomerase8e-122437
NC_016047:1978312:1992284199228419936211338Bacillus subtilis subsp. spizizenii TU-B-10 chromosome, completexylose isomerase2e-121436
NC_014479:1831404:1845754184575418470911338Bacillus subtilis subsp. spizizenii str. W23 chromosome, completexylose isomerase6e-121434
NC_014041:3229867:3245682324568232469921311Zunongwangia profunda SM-A87 chromosome, complete genomexylose isomerase5e-120431
NC_014169:1909482:1926538192653819278871350Bifidobacterium longum subsp. longum JDM301 chromosome, completeD-xylose isomerase1e-102374
NC_008010:321561:3369283369283381391212Deinococcus geothermalis DSM 11300 plasmid 1, complete sequenceXylose isomerase1e-1894.7
NC_014212:670996:6832496832496844121164Meiothermus silvanus DSM 9946 chromosome, complete genomexylose isomerase2e-1894
NC_014246:1787154:1792799179279917939651167Mobiluncus curtisii ATCC 43063 chromosome, complete genomexylose isomerase2e-1790.9
NC_007333:1743890:1850605185060518517621158Thermobifida fusca YX, complete genomexylose isomerase4e-1789.7
NC_010407:151599:1653021653021664951194Clavibacter michiganensis subsp. sepedonicus chromosome, completexylose isomerase4e-1686.3
NC_016023:915178:920915920915921250336Bacillus coagulans 36D1 chromosome, complete genomexylose isomerase6e-1582.4
NC_014839:253961:282205282205283197993Pantoea sp. At-9b plasmid pPAT9B02, complete sequenceXylose isomerase domain-containing protein TIM barrel5e-0652.8