Pre_GI: BLASTP Hits

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Query: NC_017160:4508000:4525612 Yersinia pestis D182038 chromosome, complete genome

Start: 4525612, End: 4526607, Length: 996

Host Lineage: Yersinia pestis; Yersinia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Specific virulence factors are encoded within pathogenicity islands (PAIs) that are required for the invasive phenotype associated with Yersinia infections. One key virulence plasmid contained by the three human-specific pathogens is pCD1/pYv, which encodes a type III secretion system for the delivery of virulence proteins that contribute to internalization into the host cell. It is the causative agent of plague (bubonic and pulmonary) a devastating disease which has killed millions worldwide. The organism can be transmitted from rats to humans through the bite of an infected flea or from human-to-human through the air during widespread infection. Yersinia pestis is an extremely pathogenic organism that requires very few numbers in order to cause disease, and is often lethal if left untreated. The organism is enteroinvasive, and can survive and propagate in macrophages prior to spreading systemically throughout the host. Yersinia pestis also contains a PAI on the chromosome that is similar to the SPI-2 PAI from Salmonella that allows intracellular survival in the organism.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_010465:62348:641306413065125996Yersinia pseudotuberculosis YPIII, complete genomeD-xylose ABC transporter, periplasmic substrate-binding protein1e-179629
NC_008150:4634695:464761846476184648613996Yersinia pestis Antiqua, complete genomesugar-binding periplasmic protein1e-179629
NC_008800:4488112:450847545084754509470996Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,D-xylose transporter subunit XylF5e-175613
NC_015224:4426167:444330844433084444303996Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,D-xylose transporter subunit XylF5e-174610
NC_004337:3590323:371279437127943713786993Shigella flexneri 2a str. 301, complete genomexylose binding protein4e-142504
NC_014837:33014:541895418955181993Pantoea sp. At-9b chromosome, complete genomeD-xylose ABC transporter periplasmic substrate-binding protein6e-140497
NC_007644:2099878:2109667210966721108121146Moorella thermoacetica ATCC 39073, complete genomePeriplasmic binding protein/LacI transcriptional regulator4e-111401
NC_006510:1901954:1910407191040719114981092Geobacillus kaustophilus HTA426, complete genomeD-xylose ABC transporter (substrate-binding protein)7e-105380
NC_010320:143109:1535381535381546441107Thermoanaerobacter sp. X514 chromosome, complete genomeD-xylose ABC transporter periplasmic substrate-binding protein2e-95348
NC_014538:187747:1934041934041945101107Thermoanaerobacter sp. X513 chromosome, complete genomeD-xylose ABC transporter periplasmic substrate-binding protein2e-95348
NC_014310:2017927:2033622203362220346411020Ralstonia solanacearum PSI07 megaplasmid, complete sequenceD-xylose-binding periplasmic protein5e-92338
NC_014720:154111:2001632001632012181056Caldicellulosiruptor kronotskyensis 2002 chromosome, completed-xylose ABC transporter, periplasmic substrate-binding protein5e-86318
NC_019897:905185:9067379067379078701134Thermobacillus composti KWC4 chromosome, complete genomexylose ABC transporter substrate-binding protein8e-85313
NC_015519:1888917:1900190190019019012661077Tepidanaerobacter sp. Re1 chromosome, complete genomeperiplasmic sugar-binding protein8e-66250
NC_015732:30472:3538635386364261041Spirochaeta caldaria DSM 7334 chromosome, complete genomeD-xylose ABC transporter substrate-binding protein2e-64246
NC_014364:773500:7789777789777800801104Spirochaeta smaragdinae DSM 11293 chromosome, complete genomeD-xylose ABC transporter, periplasmic substrate-binding protein3e-64245
NC_014720:154111:1948081948081958961089Caldicellulosiruptor kronotskyensis 2002 chromosome, completemonosaccharide-transporting atpase1e-63243
NC_014960:1910202:1924235192423519253621128Anaerolinea thermophila UNI-1, complete genomeD-xylose ABC transporter substrate binding protein precursor5e-57221
NC_014931:6203872:6246643624664362476651023Variovorax paradoxus EPS chromosome, complete genomeD-xylose ABC transporter, periplasmic substrate-binding protein2e-54213
NC_017323:1644000:1689453168945316904901038Sinorhizobium meliloti BL225C plasmid pSINMEB02, complete sequenceD-xylose ABC transporter periplasmic substrate-binding protein2e-53209
NC_018000:4958637:4958637495863749596741038Sinorhizobium fredii USDA 257 chromosome, complete genomeD-xylose-binding periplasmic protein XylF4e-52205
NC_014206:1694330:1704551170455117056301080Geobacillus sp. C56-T3 chromosome, complete genomeABC transporter substrate-binding protein7e-51201
NC_016593:2015321:2022353202235320234321080Geobacillus thermoleovorans CCB_US3_UF5 chromosome, completeABC-type xylose transport system periplasmic component-like protein1e-50200
NC_006510:1921541:1949018194901819500971080Geobacillus kaustophilus HTA426, complete genomeABC transporter (substrate-binding protein)1e-50200
NC_009328:1903291:1908123190812319091991077Geobacillus thermodenitrificans NG80-2 chromosome, complete genomesugar ABC transporter ATP-binding protein2e-49196
NC_013406:1640787:1652061165206116534881428Paenibacillus sp. Y412MC10 chromosome, complete genomeABC-type xylose transport system periplasmic component-like protein5e-47188
NC_016641:2894899:2919994291999429210791086Paenibacillus terrae HPL-003 chromosome, complete genomeMultiple sugar-binding periplasmic receptor chvE6e-46184
NC_014483:1146682:1158577115857711596621086Paenibacillus polymyxa E681 chromosome, complete genomeMultiple sugar-binding periplasmic receptor chvE precursor3e-45182
NC_015559:3511231:3526358352635835274521095Marinomonas posidonica IVIA-Po-181 chromosome, complete genomeputative sugar uptake ABC transporter periplasmic solute-binding protein precursor1e-44180
NC_020291:5093138:5117428511742851185581131Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genomeABC-type xylose transport system, periplasmic component7e-44177
NC_014829:1376253:1378907137890713800101104Bacillus cellulosilyticus DSM 2522 chromosome, complete genomeperiplasmic binding protein/LacI transcriptional regulator4e-42172
NC_013739:5705325:5709242570924257103841143Conexibacter woesei DSM 14684, complete genomeputative sugar ABC transporter, substrate- binding protein2e-42172
NC_015732:30472:3657136571376861116Spirochaeta caldaria DSM 7334 chromosome, complete genomeABC transporter1e-40167
NC_013510:3117837:3122280312228031233561077Thermomonospora curvata DSM 43183, complete genomeD-xylose-binding periplasmic ABC transporter protein3e-40166
NC_019973:6102442:6130288613028861313581071Mesorhizobium australicum WSM2073, complete genomeABC-type xylose transport system, periplasmic component4e-40165
NC_021177:6662668:6676348667634866774601113Streptomyces fulvissimus DSM 40593, complete genomeSolute-binding protein4e-39162
NC_006087:28490:3409234092351621071Leifsonia xyli subsp. xyli str. CTCB07, complete genomemultiple sugar-binding periplasmic receptor1e-38160
NC_015953:5908467:5922472592247259235811110Streptomyces sp. SirexAA-E chromosome, complete genomeputative ABC transporter solute-binding protein2e-36152
NC_013929:2375613:2381873238187323829641092Streptomyces scabiei 87.22 chromosome, complete genomesolute-binding protein2e-36152
NC_010407:151599:1577231577231588411119Clavibacter michiganensis subsp. sepedonicus chromosome, completeputative extracellular sugar-binding protein3e-36152
NC_016114:1435436:1439779143977914408881110Streptomyces flavogriseus ATCC 33331 chromosome, complete genomeABC transporter substrate-binding protein4e-36152
NC_010572:1748668:1753166175316617542781113Streptomyces griseus subsp. griseus NBRC 13350, complete genomeputative ABC transporter solute-binding protein7e-36151
NC_018750:6315802:6332963633296363340271065Streptomyces venezuelae ATCC 10712, complete genomeL-arabinose-binding periplasmic protein precursor AraF2e-35149
NC_003888:6568000:6589575658957565906901116Streptomyces coelicolor A3(2), complete genomesolute-binding protein1e-34147
NC_019897:905185:9079969079969090931098Thermobacillus composti KWC4 chromosome, complete genomexylose ABC transporter substrate-binding protein2e-34146
NC_003888:4031299:4047138404713840482561119Streptomyces coelicolor A3(2), complete genomesecreted solute-binding protein1e-33144
NC_003155:2730469:2734874273487427359831110Streptomyces avermitilis MA-4680, complete genomeABC transporter solute-binding protein4e-33142
NC_013714:2350749:2353603235360323547601158Bifidobacterium dentium Bd1, complete genomeHypothetical secreted protein4e-29129
NC_017093:5410932:5418784541878454199111128Actinoplanes missouriensis 431, complete genomeputative ABC transporter substrate-binding protein3e-29129
NC_020908:2788852:2794694279469427957311038Octadecabacter arcticus 238, complete genomeputative sugar ABC transporter extracellular solute-binding protein4e-26119
NC_008010:321561:328159328159328701543Deinococcus geothermalis DSM 11300 plasmid 1, complete sequenceD-xylose-binding periplasmic protein precursor2e-25116
NC_008010:321561:329446329446329961516Deinococcus geothermalis DSM 11300 plasmid 1, complete sequenceD-xylose-binding periplasmic protein precursor2e-23110
NC_014014:153837:1744281744281756241197Mycoplasma crocodyli MP145 chromosome, complete genome46 kDa surface antigen (p46)7e-1685.1
NC_014212:670996:681103681103681888786Meiothermus silvanus DSM 9946 chromosome, complete genomeABC-type xylose transport system periplasmic component2e-1583.6
NC_013216:4131563:4142715414271541440251311Desulfotomaculum acetoxidans DSM 771, complete genomeperiplasmic binding protein/LacI transcriptional regulator6e-1272
NC_012559:1635922:163844016384401639369930Laribacter hongkongensis HLHK9, complete genomeRbsB1e-1170.9
NC_008541:2037793:204289820428982043854957Arthrobacter sp. FB24 chromosome 1, complete sequenceperiplasmic binding protein/LacI transcriptional regulator1e-1067.8
NC_016943:2391366:2399546239954624006551110Blastococcus saxobsidens DD2, complete genomeputative D-ribose-binding protein1e-1067.4
NC_015589:1468774:149197714919771492936960Desulfotomaculum ruminis DSM 2154 chromosome, complete genomeperiplasmic binding protein/LacI transcriptional regulator3e-1066.2
NC_015425:2024154:204235720423572043271915Clostridium botulinum BKT015925 chromosome, complete genomeribose ABC transporter periplasmic D-ribose-binding protein1e-0964.3
NC_014654:188835:189917189917190873957Halanaerobium sp. 'sapolanicus' chromosome, complete genomebifunctional carbohydrate binding and transport protein3e-0963.2
NC_008593:1797000:181560418156041816518915Clostridium novyi NT, complete genomeribose ABC transporter, periplasmic D-ribose-binding protein2e-0963.2
NC_015687:1478668:149652614965261497485960Clostridium acetobutylicum DSM 1731 chromosome, complete genomeperiplasmic sugar-binding protein3e-0962.8
NC_017954:934616:9372219372219382581038Thermogladius cellulolyticus 1633 chromosome, complete genomesugar ABC transporter periplasmic protein4e-0962.8
NC_016614:686887:702059702059702937879Vibrio sp. EJY3 chromosome 2, complete sequenceD-ribose transporter subunit RbsB4e-0962.4
NC_013205:2332174:233878923387892339754966Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446,periplasmic binding protein/LacI transcriptional regulator4e-0962.4
NC_013517:4208939:424657742465774247536960Sebaldella termitidis ATCC 33386, complete genomeperiplasmic binding protein/LacI transcriptional regulator9e-0961.2
NC_010556:2328303:234419623441962345110915Exiguobacterium sibiricum 255-15, complete genomeperiplasmic binding protein/LacI transcriptional regulator1e-0860.8
NC_014623:243593:243593243593244555963Stigmatella aurantiaca DW4/3-1 chromosome, complete genomed-ribose-binding periplasmic protein5e-0858.9
NC_015161:1556766:156531915653191566305987Deinococcus proteolyticus MRP chromosome, complete genomeperiplasmic binding protein/LacI transcriptional regulator1e-0757.8
NC_010184:661226:672022672022672945924Bacillus weihenstephanensis KBAB4, complete genomeMonosaccharide-transporting ATPase1e-0757.8
NC_016113:11500:2570925709276581950Streptomyces cattleya NRRL 8057 plasmid pSCAT, complete sequenceD-ribose ABC transporter permease1e-0757.8
NC_015186:2719645:2726542272654227275761035Acidiphilium multivorum AIU301, complete genomesugar ABC transporter substrate-binding protein2e-0756.6
NC_009484:2442923:2449820244982024508571038Acidiphilium cryptum JF-5 chromosome, complete genomeperiplasmic binding protein/LacI transcriptional regulator2e-0756.6
NC_018665:2163713:218209821820982183012915Exiguobacterium antarcticum B7 chromosome, complete genomePeriplasmic binding protein/LacI transcriptional regulator3e-0756.2
NC_014364:3707311:372173937217393722686948Spirochaeta smaragdinae DSM 11293 chromosome, complete genomesugar ABC transporter (sugar-binding protein)3e-0756.2
NC_011725:681387:690825690825691751927Bacillus cereus B4264 chromosome, complete genomeribose ABC transporter ribose-binding protein3e-0756.2
NC_009654:4716417:474526347452634746240978Marinomonas sp. MWYL1, complete genomeperiplasmic binding protein/LacI transcriptional regulator4e-0755.8
NC_006510:1921541:192787719278771928833957Geobacillus kaustophilus HTA426, complete genomesugar ABC transporter (sugar-binding protein)4e-0755.8
NC_003317:392271:409632409632410609978Brucella melitensis 16M chromosome I, complete sequenceD-RIBOSE-BINDING PERIPLASMIC PROTEIN PRECURSOR6e-0755.5
NC_016771:701909:714612714612715538927Bacillus cereus NC7401, complete genomeribose ABC transporter substrate-binding protein7e-0755.1
NC_011969:726369:736252736252737178927Bacillus cereus Q1 chromosome, complete genomeribose ABC transporter substrate-binding protein8e-0754.7
NC_014837:2709813:271725127172512718174924Pantoea sp. At-9b chromosome, complete genomeperiplasmic-binding protein/LacI transcriptional regulator9e-0754.7
NC_019897:2696587:270632827063282707290963Thermobacillus composti KWC4 chromosome, complete genomesugar ABC transporter substrate-binding protein1e-0654.3
NC_003143:2895617:290166829016682902597930Yersinia pestis CO92, complete genomeputative sugar-binding periplasmic protein1e-0654.3
NC_008149:1221637:122772012277201228649930Yersinia pestis Nepal516, complete genomesugar-binding periplasmic protein1e-0654.3
NC_017154:3094000:310740531074053108334930Yersinia pestis D106004 chromosome, complete genomeputative sugar-binding periplasmic protein1e-0654.3
NC_011772:647778:658732658732659658927Bacillus cereus G9842, complete genomeribose ABC transporter, ribose-binding protein2e-0653.5
NC_004088:1291754:129781912978191298748930Yersinia pestis KIM, complete genomeperiplasmic solute-binding protein of ABC transporter3e-0652.8
NC_017208:671128:682902682902683828927Bacillus thuringiensis serovar chinensis CT-43 chromosome, completemethylthioribose-binding protein3e-0652.8
NC_014650:2143033:215129121512912152265975Geobacillus sp. Y4.1MC1 chromosome, complete genomeperiplasmic binding protein/LacI transcriptional regulator6e-0652
NC_016590:1380092:139483113948311395823993Burkholderia sp. YI23 chromosome 3, complete sequenceputative substrate binding component of ABC transporter8e-0651.6
NC_002677:491043:4960604960604970971038Mycobacterium leprae TN, complete genomeputative D-ribose-binding protein8e-0651.6
NC_011896:491052:4960694960694971061038Mycobacterium leprae Br4923, complete genomeputative D-ribose-binding protein8e-0651.6
NC_015732:140087:147960147960148913954Spirochaeta caldaria DSM 7334 chromosome, complete genomeperiplasmic binding protein/LacI transcriptional regulator8e-0651.6
NC_018531:1991218:199227719922771993245969Arthrobacter sp. Rue61a chromosome, complete genomeD-ribose-binding protein RbsB9e-0651.2