Pre_GI: BLASTP Hits

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Query: NC_017160:4508000:4508987 Yersinia pestis D182038 chromosome, complete genome

Start: 4508987, End: 4510231, Length: 1245

Host Lineage: Yersinia pestis; Yersinia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Specific virulence factors are encoded within pathogenicity islands (PAIs) that are required for the invasive phenotype associated with Yersinia infections. One key virulence plasmid contained by the three human-specific pathogens is pCD1/pYv, which encodes a type III secretion system for the delivery of virulence proteins that contribute to internalization into the host cell. It is the causative agent of plague (bubonic and pulmonary) a devastating disease which has killed millions worldwide. The organism can be transmitted from rats to humans through the bite of an infected flea or from human-to-human through the air during widespread infection. Yersinia pestis is an extremely pathogenic organism that requires very few numbers in order to cause disease, and is often lethal if left untreated. The organism is enteroinvasive, and can survive and propagate in macrophages prior to spreading systemically throughout the host. Yersinia pestis also contains a PAI on the chromosome that is similar to the SPI-2 PAI from Salmonella that allows intracellular survival in the organism.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_010465:62348:8103381033822771245Yersinia pseudotuberculosis YPIII, complete genomephosphoribosylglycinamide synthetase0861
NC_012779:1820244:1825085182508518263261242Edwardsiella ictaluri 93-146, complete genomehypothetical protein6e-128457
NC_013956:595320:6182086182086194671260Pantoea ananatis LMG 20103 chromosome, complete genomeArgH22e-61236
NC_008278:5012000:5046368504636850475911224Frankia alni ACN14a, complete genomehypothetical protein; putative Glutathione synthetase ATP-binding domain6e-58225
NC_017249:7993713:8027496802749680287821287Bradyrhizobium japonicum USDA 6, complete genomehypothetical protein5e-53208
NC_014841:131308:1390631390631403101248Pantoea sp. At-9b plasmid pPAT9B04, complete sequencehypothetical protein2e-45183
NC_010995:4525119:4535045453504545363011257Cellvibrio japonicus Ueda107, complete genomeputative phosphoribosylglycinamide synthetase3e-45182
NC_011987:362997:3688513688513701101260Agrobacterium radiobacter K84 plasmid pAtK84c, complete sequencebiotin carboxylase5e-37155
NC_016113:994469:9948049948049960631260Streptomyces cattleya NRRL 8057 plasmid pSCAT, complete sequencehypothetical protein3e-26119
NC_009512:1025365:1035982103598210372141233Pseudomonas putida F1, complete genomeBiotin carboxylase-like protein2e-1997.1
NC_014206:1202907:1211656121165612128791224Geobacillus sp. C56-T3 chromosome, complete genomehypothetical protein4e-1376.3
NC_015732:982774:9915969915969928521257Spirochaeta caldaria DSM 7334 chromosome, complete genomehypothetical protein1e-1274.7
NC_003888:7659639:7662638766263876638551218Streptomyces coelicolor A3(2), complete genomecarboxylase1e-1171.6
NC_013206:21288:2917129171304031233Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446phosphoribosylglycinamide synthetase5e-1169.3
NC_008278:296526:3208103208103222311422Frankia alni ACN14a, complete genomeputative carboxylase.2e-0964.3
NC_015381:1318818:1341068134106813423061239Burkholderia gladioli BSR3 chromosome 1, complete sequencehypothetical protein2e-0963.9
NC_013722:2919560:2934132293413229354031272Xanthomonas albilineans, complete genomeputative carbamoyl-phosphate synthase, cpsase protein2e-0963.9
NC_014976:759129:7710707710707723111242Bacillus subtilis BSn5 chromosome, complete genomephosphoribosylglycinamide synthetase1e-0861.6
NC_016633:1798758:1810586181058618117821197Sphaerochaeta pleomorpha str. Grapes chromosome, complete genomebiotin carboxylase2e-0860.8
NC_011567:238249:2382492382492394871239Anoxybacillus flavithermus WK1, complete genomeAlanine-anticapsin ligase bacD related protein8e-0858.5
NC_004578:212468:2225282225282237451218Pseudomonas syringae pv. tomato str. DC3000, complete genomehypothetical protein1e-0757.8
NC_017219:538864:5664635664635677041242Bifidobacterium longum subsp. infantis ATCC 15697, complete genomehypothetical protein2e-0757.8
NC_011593:533884:5666705666705679111242Bifidobacterium longum subsp. infantis ATCC 15697 chromosome,hypothetical protein2e-0757.8
NC_011831:2728932:2747266274726627485221257Chloroflexus aggregans DSM 9485, complete genomephosphoribosylglycinamide synthetase6e-0755.8
NC_013440:8405719:8423293842329384244861194Haliangium ochraceum DSM 14365, complete genomeprotein of unknown function DUF2018e-0755.5
NC_019973:5899142:5899142589914259004281287Mesorhizobium australicum WSM2073, complete genomebiotin carboxylase7e-0755.5
NC_014923:5970182:5970182597018259714681287Mesorhizobium ciceri biovar biserrulae WSM1271 chromosome, completeCarbamoyl-phosphate synthase L chain ATP-binding protein7e-0755.5
NC_015675:6493444:6524853652485365261391287Mesorhizobium opportunistum WSM2075 chromosome, complete genomeATP-dependent carboxylate-amine ligase domain-containing protein ATP-grasp7e-0755.5
NC_015500:900807:9104639104639116681206Treponema brennaborense DSM 12168 chromosome, complete genomeATP-grasp fold domain protein, DUF201-type3e-0653.5
NC_012522:4692260:4694641469464146958341194Rhodococcus opacus B4, complete genomehypothetical protein3e-0653.5
NC_006322:203932:2049512049512061681218Bacillus licheniformis ATCC 14580, complete genomehypothetical protein3e-0653.1
NC_006270:204000:2051442051442063611218Bacillus licheniformis ATCC 14580, complete genomehypothetical protein3e-0653.1
NC_015381:1318818:1342320134232013436371318Burkholderia gladioli BSR3 chromosome 1, complete sequence4e-0653.1
NC_013204:2826500:2847006284700628482141209Eggerthella lenta DSM 2243, complete genomeprotein of unknown function DUF2014e-0652.8
NC_020211:1655826:1662601166260116638421242Serratia marcescens WW4, complete genomeATP-dependent carboxylate-amine ligase domain-containing protein5e-0652.8
NC_020304:2677372:2698138269813826992921155Desulfocapsa sulfexigens DSM 10523, complete genomebiotin carboxylase5e-0652.4
NC_012522:4692260:4695859469585946971181260Rhodococcus opacus B4, complete genomehypothetical protein1e-0551.6