Pre_GI: BLASTP Hits

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Query: NC_017160:2362002:2364654 Yersinia pestis D182038 chromosome, complete genome

Start: 2364654, End: 2365931, Length: 1278

Host Lineage: Yersinia pestis; Yersinia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Specific virulence factors are encoded within pathogenicity islands (PAIs) that are required for the invasive phenotype associated with Yersinia infections. One key virulence plasmid contained by the three human-specific pathogens is pCD1/pYv, which encodes a type III secretion system for the delivery of virulence proteins that contribute to internalization into the host cell. It is the causative agent of plague (bubonic and pulmonary) a devastating disease which has killed millions worldwide. The organism can be transmitted from rats to humans through the bite of an infected flea or from human-to-human through the air during widespread infection. Yersinia pestis is an extremely pathogenic organism that requires very few numbers in order to cause disease, and is often lethal if left untreated. The organism is enteroinvasive, and can survive and propagate in macrophages prior to spreading systemically throughout the host. Yersinia pestis also contains a PAI on the chromosome that is similar to the SPI-2 PAI from Salmonella that allows intracellular survival in the organism.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_010159:2164500:2199113219911322003901278Yersinia pestis Angola, complete genomehypothetical protein0847
NC_009381:1362471:1361125136112513624741350Yersinia pestis Pestoides F chromosome, complete genomehypothetical protein0847
NC_003143:2137945:2172402217240221737511350Yersinia pestis CO92, complete genomehypothetical protein0847
NC_005810:1794490:1829146182914618304951350Yersinia pestis biovar Microtus str. 91001, complete genomehypothetical protein0847
NC_008150:1420825:1455481145548114568301350Yersinia pestis Antiqua, complete genomehypothetical protein0847
NC_004088:2640440:2643047264304726443961350Yersinia pestis KIM, complete genomehypothetical protein0847
NC_015224:1914833:1930509193050919318431335Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,hypothetical protein0707
NC_017154:2137500:217231121723112173246936Yersinia pestis D106004 chromosome, complete genomehypothetical protein6e-168590
NC_010694:3178842:3182162318216231834811320Erwinia tasmaniensis, complete genomePutative adhesin MrkD (involved in the expression of type III fimbriae)3e-63243
NC_013008:1271621:1285169128516912865031335Escherichia coli O157:H7 str. TW14359 chromosome, complete genomefimbrial-like adhesion protein1e-53210
NC_002695:1329472:1342605134260513439391335Escherichia coli O157:H7 str. Sakai, complete genomeputative outer membrane protein1e-53210
NC_002655:1413244:1426377142637714277111335Escherichia coli O157:H7 EDL933, complete genomehypothetical protein1e-53210
NC_017154:2137500:217197021719702172278309Yersinia pestis D106004 chromosome, complete genomehypothetical protein3e-53209
NC_013941:1314158:1327289132728913286231335Escherichia coli O55:H7 str. CB9615 chromosome, complete genomehypothetical protein2e-53209
NC_011353:1271335:1284883128488312860671185Escherichia coli O157:H7 str. EC4115 chromosome, complete genomeouter membrane protein5e-51202
NC_020829:1307736:1328605132860513299721368Pseudomonas denitrificans ATCC 13867, complete genomefimbrial subunit5e-47189
NC_010694:436500:4478584478584491471290Erwinia tasmaniensis, complete genomehypothetical protein1e-42174
NC_008463:5313527:5317504531750453188501347Pseudomonas aeruginosa UCBPP-PA14, complete genomefimbrial subunit1e-42174
NC_007973:1785985:1798317179831717997441428Ralstonia metallidurans CH34 chromosome 1, complete sequencehypothetical protein3e-41169
NC_006155:172313:1858691858691872361368Yersinia pseudotuberculosis IP 32953, complete genomehypothetical protein3e-34146
NC_010634:166900:1804631804631818301368Yersinia pseudotuberculosis PB1/+, complete genomehypothetical protein3e-34146
NC_014618:1700784:1704521170452117058641344Enterobacter cloacae SCF1 chromosome, complete genomefimbrial protein domain-containing protein1e-24114
NC_014562:1402863:1414773141477314161011329Pantoea vagans C9-1 chromosome, complete genomehypothetical protein2e-22107
NC_003198:378844:3795683795683808931326Salmonella enterica subsp. enterica serovar Typhi str. CT18,putative fimbrial protein4e-22106
NC_004631:2584244:2600220260022026015451326Salmonella enterica subsp. enterica serovar Typhi Ty2, completeputative fimbrial protein4e-22106
NC_016832:2581145:2597121259712125984461326Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,fimbriae4e-22106
NC_011149:361765:3624893624893638141326Salmonella enterica subsp. enterica serovar Agona str. SL483,putative fimbrial usher4e-22106
NC_006905:401154:4242444242444255691326Salmonella enterica subsp. enterica serovar Choleraesuis strputative fimbriae; usher3e-22106
NC_011205:371001:3830963830963844211326Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853fimbrial usher3e-22106
NC_010102:2721374:2737408273740827387331326Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein9e-22105
NC_011294:346915:3590103590103603351326Salmonella enterica subsp. enterica serovar Enteritidis strfimbrial protein8e-22105
NC_011080:383441:3841653841653854901326Salmonella enterica subsp. enterica serovar Newport str. SL254,putative fimbrial usher8e-22105
NC_011083:403022:4268324268324281571326Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,putative fimbrial usher8e-22105
NC_006511:2467763:2483728248372824850531326Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCCputative fimbrial protein6e-22105
NC_011147:2463299:2479264247926424805891326Salmonella enterica subsp. enterica serovar Paratyphi A strfimbrial protein6e-22105
NC_003197:367430:3797053797053810301326Salmonella typhimurium LT2, complete genomeputative fimbrial usher6e-22105
NC_016810:366908:3791833791833805081326Salmonella enterica subsp. enterica serovar Typhimurium strputative fimbrial protein6e-22105
NC_016856:365665:3803903803903817151326Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Sputative fimbrial usher6e-22105
NC_016857:366908:3791833791833805081326Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74putative fimbrial usher6e-22105
NC_016860:397138:4210964210964224211326Salmonella enterica subsp. enterica serovar Typhimurium strputative fimbrial usher protein6e-22105
NC_016863:367404:3796793796793810041326Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1putative fimbrial usher6e-22105
NC_017046:366905:3791803791803805051326Salmonella enterica subsp. enterica serovar Typhimurium str. 798fimbrial protein6e-22105
NC_011094:380428:3924753924753938001326Salmonella enterica subsp. enterica serovar Schwarzengrund strfimbrial usher1e-21104
NC_012125:373630:3743543743543756551302Salmonella enterica subsp. enterica serovar Paratyphi C strainfimbrial protein1e-21104
NC_016831:2627515:2643545264354526448701326Salmonella enterica subsp. enterica serovar Gallinarum/pullorumputative fimbrial protein2e-21103
NC_011274:376970:3776943776943790191326Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91fimbrial protein2e-21103
NC_009648:293052:2954322954322967661335Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genomeputative fimbriae; usher8e-1788.6
NC_013716:3109700:31097003109700312121611517Citrobacter rodentium ICC168, complete genomeputative fimbrial adhesin8e-1478.6