Pre_GI: BLASTP Hits

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Query: NC_017160:1507500:1523493 Yersinia pestis D182038 chromosome, complete genome

Start: 1523493, End: 1524581, Length: 1089

Host Lineage: Yersinia pestis; Yersinia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Specific virulence factors are encoded within pathogenicity islands (PAIs) that are required for the invasive phenotype associated with Yersinia infections. One key virulence plasmid contained by the three human-specific pathogens is pCD1/pYv, which encodes a type III secretion system for the delivery of virulence proteins that contribute to internalization into the host cell. It is the causative agent of plague (bubonic and pulmonary) a devastating disease which has killed millions worldwide. The organism can be transmitted from rats to humans through the bite of an infected flea or from human-to-human through the air during widespread infection. Yersinia pestis is an extremely pathogenic organism that requires very few numbers in order to cause disease, and is often lethal if left untreated. The organism is enteroinvasive, and can survive and propagate in macrophages prior to spreading systemically throughout the host. Yersinia pestis also contains a PAI on the chromosome that is similar to the SPI-2 PAI from Salmonella that allows intracellular survival in the organism.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017265:1136000:1137070113707011381581089Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,putative regulatory prophage protein0716
NC_004088:3382148:3397991339799133990851095Yersinia pestis KIM, complete genomehypothetical protein0716
NC_005810:1130251:1146101114610111471891089Yersinia pestis biovar Microtus str. 91001, complete genomeputative regulatory prophage protein0716
NC_008149:3251196:3267046326704632681341089Yersinia pestis Nepal516, complete genomeregulatory prophage protein0716
NC_003143:1233128:1235740123574012368281089Yersinia pestis CO92, complete genomeputative regulatory prophage protein0716
NC_008150:650899:6524766524766535641089Yersinia pestis Antiqua, complete genomeputative regulatory prophage protein0716
NC_010159:1417993:1419892141989214209801089Yersinia pestis Angola, complete genomeYabA0716
NC_009381:2939782:2955631295563129567191089Yersinia pestis Pestoides F chromosome, complete genomeregulatory prophage protein0716
NC_014029:1283500:1284937128493712860251089Yersinia pestis Z176003 chromosome, complete genomeputative regulatory prophage protein0716
NC_017154:1225500:1227030122703012281181089Yersinia pestis D106004 chromosome, complete genomeputative regulatory prophage protein0716
NC_017168:4155143:4157756415775641588441089Yersinia pestis A1122 chromosome, complete genomeputative regulatory prophage protein0716
NC_012912:4194821:4195622419562241976672046Dickeya zeae Ech1591, complete genomeP4 alpha zinc-binding domain protein9e-141499
NC_013592:4295449:4298421429842143004662046Dickeya dadantii Ech586, complete genomeP4 alpha zinc-binding domain protein2e-140498
NC_012880:4117376:4117865411786541199102046Dickeya dadantii Ech703, complete genomeP4 alpha zinc-binding domain protein4e-140497
NC_014500:443874:4601454601454621902046Dickeya dadantii 3937 chromosome, complete genomeDNA primase2e-139495
NC_014837:1144500:115761111576111158447837Pantoea sp. At-9b chromosome, complete genome5e-109394
NC_014121:1682638:1709461170946117108701410Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completeputative DNA primase4e-108391
NC_013353:1305712:1329897132989713312971401Escherichia coli O103:H2 str. 12009, complete genomeDNA primase3e-96352
AP010958:1305712:1329897132989713312971401Escherichia coli O103:H2 str. 12009 DNA, complete genomeDNA primase3e-96352
NC_009648:4497749:450723045072304507979750Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genomehypothetical protein9e-74277
NC_008800:575141:583381583381583731351Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,4e-60232
NC_015740:2998500:3012693301269330138141122Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, completehypothetical protein1e-29130
NC_009720:1248866:1251196125119612529681773Xanthobacter autotrophicus Py2, complete genomeAAA ATPase3e-28125
NC_007651:3560652:3577024357702435789671944Burkholderia thailandensis E264 chromosome I, complete sequencehypothetical protein4e-27122
NC_008314:2686851:2692615269261526946212007Ralstonia eutropha H16 chromosome 2, complete sequenceputative helicase2e-26120
NC_003305:922357:9440899440899461882100Agrobacterium tumefaciens str. C58 chromosome linear, completehypothetical protein3e-26119
NC_003063:1128370:1128370112837011306672298Agrobacterium tumefaciens str. C58 chromosome linear, completehypothetical protein3e-26119
NC_014010:175500:1813701813701832171848Candidatus Puniceispirillum marinum IMCC1322 chromosome, completeAAA ATPase6e-25115
NC_016002:1938749:1944321194432119464202100Pseudogulbenkiania sp. NH8B, complete genomeRecA-family ATPase-like protein2e-23110
NC_011985:3380842:3392861339286133939551095Agrobacterium radiobacter K84 chromosome 1, complete genomehypothetical protein6e-23108
NC_009484:1299500:1306311130631113084642154Acidiphilium cryptum JF-5 chromosome, complete genomehypothetical protein6e-22105
NC_013850:2357608:237208123720812372371291Klebsiella variicola At-22 chromosome, complete genomehypothetical protein2e-1583.6
NC_016642:471656:4716564716564727531098Pseudovibrio sp. FO-BEG1 chromosome, complete genomehelicase6e-1582
NC_014221:1932903:1943109194310919441431035Truepera radiovictrix DSM 17093 chromosome, complete genome8e-1375.1
NC_013757:1544348:1561755156175515628671113Geodermatophilus obscurus DSM 43160, complete genomehypothetical protein9e-1271.6
NC_010511:7400255:7400883740088374031622280Methylobacterium sp. 4-46 chromosome, complete genomehypothetical protein2e-1170.5
NC_010505:4396800:4408668440866844098161149Methylobacterium radiotolerans JCM 2831, complete genomehypothetical protein6e-1065.5
NC_015422:1116359:1129735112973511310001266Alicycliphilus denitrificans K601 chromosome, complete genomeAAA ATPase1e-0964.3
NC_010505:2103887:2121721212172121229351215Methylobacterium radiotolerans JCM 2831, complete genomehypothetical protein6e-0962
NC_010511:4415731:4430604443060444327902187Methylobacterium sp. 4-46 chromosome, complete genomehypothetical protein1e-0860.8
NC_015422:3581848:3592064359206435935361473Alicycliphilus denitrificans K601 chromosome, complete genomePrimase 13e-0653.1