Pre_GI: BLASTN Hits

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Query: NC_017154:848500 Yersinia pestis D106004 chromosome, complete genome

Start: 848500, End: 883153, Length: 34654

Host Lineage: Yersinia pestis; Yersinia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Specific virulence factors are encoded within pathogenicity islands (PAIs) that are required for the invasive phenotype associated with Yersinia infections. One key virulence plasmid contained by the three human-specific pathogens is pCD1/pYv, which encodes a type III secretion system for the delivery of virulence proteins that contribute to internalization into the host cell. It is the causative agent of plague (bubonic and pulmonary) a devastating disease which has killed millions worldwide. The organism can be transmitted from rats to humans through the bite of an infected flea or from human-to-human through the air during widespread infection. Yersinia pestis is an extremely pathogenic organism that requires very few numbers in order to cause disease, and is often lethal if left untreated. The organism is enteroinvasive, and can survive and propagate in macrophages prior to spreading systemically throughout the host. Yersinia pestis also contains a PAI on the chromosome that is similar to the SPI-2 PAI from Salmonella that allows intracellular survival in the organism.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_008150:37119533711953374731835366Yersinia pestis Antiqua, complete genome034730BLASTN svgBLASTP svg
NC_008149:36481393648139368280234664Yersinia pestis Nepal516, complete genome034730BLASTN svgBLASTP svg
NC_010465:80424980424984108836840Yersinia pseudotuberculosis YPIII, complete genome014810BLASTN svgBLASTP svg
NC_003143:1973867*1973867199917525309Yersinia pestis CO92, complete genome03879BLASTN svgBLASTP svg
NC_004088:3382148*3382148340611023963Yersinia pestis KIM, complete genome03879BLASTN svgBLASTP svg
NC_008149:3251196*3251196327595124756Yersinia pestis Nepal516, complete genome03879BLASTN svgBLASTP svg
NC_005815:611486114811099949852Yersinia pestis biovar Microtus str. 91001 plasmid pMT1, complete03877BLASTN svgBLASTP svg
NC_003143:67562267562269837822757Yersinia pestis CO92, complete genome03875BLASTN svgBLASTP svg
NC_003143:87536787536791053535169Yersinia pestis CO92, complete genome03875BLASTN svgBLASTP svg
NC_004088:35053833505383354055935177Yersinia pestis KIM, complete genome03875BLASTN svgBLASTP svg
NC_005810:43067164306716433058723872Yersinia pestis biovar Microtus str. 91001, complete genome03875BLASTN svgBLASTP svg
NC_008149:33732293373229340909935871Yersinia pestis Nepal516, complete genome03875BLASTN svgBLASTP svg
NC_010159:30339893033989305747023482Yersinia pestis Angola, complete genome03875BLASTN svgBLASTP svg
NC_005810:14677721467772150509937328Yersinia pestis biovar Microtus str. 91001, complete genome03874BLASTN svgBLASTP svg
NC_005810:11302511130251115417023920Yersinia pestis biovar Microtus str. 91001, complete genome03874BLASTN svgBLASTP svg
NC_004838:510135101310003049018Yersinia pestis KIM plasmid pMT-1, complete sequence03874BLASTN svgBLASTP svg
NC_004088:4202247*4202247422568123435Yersinia pestis KIM, complete genome03874BLASTN svgBLASTP svg
NC_004088:2640440*2640440268328342844Yersinia pestis KIM, complete genome03874BLASTN svgBLASTP svg
NC_004088:2366000*2366000239081024811Yersinia pestis KIM, complete genome03874BLASTN svgBLASTP svg
NC_003143:39874839874842431625569Yersinia pestis CO92, complete genome03874BLASTN svgBLASTP svg
NC_003143:2433190*2433190245920626017Yersinia pestis CO92, complete genome03874BLASTN svgBLASTP svg
NC_008118:567775677710299946223Yersinia pestis Nepal516 plasmid pMT, complete sequence03874BLASTN svgBLASTP svg
NC_008120:62000620008949927500Yersinia pestis Antiqua plasmid pMT, complete sequence03874BLASTN svgBLASTP svg
NC_008149:1842500*1842500188064438145Yersinia pestis Nepal516, complete genome03874BLASTN svgBLASTP svg
NC_010159:10719371071937109241320477Yersinia pestis Angola, complete genome03874BLASTN svgBLASTP svg
NC_010158:1*11809918099Yersinia pestis Angola plasmid pMT-pPCP, complete sequence03874BLASTN svgBLASTP svg
NC_008150:84472784472789009945373Yersinia pestis Antiqua, complete genome03874BLASTN svgBLASTP svg
NC_008150:4601202*4601202462030019099Yersinia pestis Antiqua, complete genome03874BLASTN svgBLASTP svg
NC_008150:43737224373722439711823397Yersinia pestis Antiqua, complete genome03874BLASTN svgBLASTP svg
NC_008150:34958513495851351954723697Yersinia pestis Antiqua, complete genome03874BLASTN svgBLASTP svg
NC_008150:1705152*1705152174460539454Yersinia pestis Antiqua, complete genome03874BLASTN svgBLASTP svg
NC_008149:31886031886034352424665Yersinia pestis Nepal516, complete genome03874BLASTN svgBLASTP svg
NC_010159:31206423120642314771827077Yersinia pestis Angola, complete genome03870BLASTN svgBLASTP svg
NC_010159:34484903448490348540936920Yersinia pestis Angola, complete genome03868BLASTN svgBLASTP svg
NC_008149:2652825*2652825267618023356Yersinia pestis Nepal516, complete genome03866BLASTN svgBLASTP svg
NC_008253:48178644817864486276044897Escherichia coli 536, complete genome03838BLASTN svgBLASTP svg
NC_008253:3941938*3941938399883856901Escherichia coli 536, complete genome03826BLASTN svgBLASTP svg
NC_011750:15650001565000158659921600Escherichia coli IAI39 chromosome, complete genome03818BLASTN svgBLASTP svg
NC_007941:11319113195659945281Escherichia coli UTI89 plasmid pUTI89, complete sequence03810BLASTN svgBLASTP svg
NC_008253:29650029650032229825799Escherichia coli 536, complete genome03721BLASTN svgBLASTP svg
NC_008253:3122148*3122148315923237085Escherichia coli 536, complete genome03705BLASTN svgBLASTP svg
NC_008150:27858302785830280809922270Yersinia pestis Antiqua, complete genome03703BLASTN svgBLASTP svg
NC_008253:334467*33446741611981653Escherichia coli 536, complete genome02771BLASTN svgBLASTP svg
NC_008253:28285732828573285250723935Escherichia coli 536, complete genome02327BLASTN svgBLASTP svg
NC_010634:13423931342393136733024938Yersinia pseudotuberculosis PB1/+, complete genome02198BLASTN svgBLASTP svg
NC_004088:22272782227278224825620979Yersinia pestis KIM, complete genome02198BLASTN svgBLASTP svg
NC_003143:12331281233128125981426687Yersinia pestis CO92, complete genome02198BLASTN svgBLASTP svg
NC_010159:22523802252380227191719538Yersinia pestis Angola, complete genome02190BLASTN svgBLASTP svg
NC_010159:12880001288000132559537596Yersinia pestis Angola, complete genome02014BLASTN svgBLASTP svg
NC_010159:1668795*1668795168827719483Yersinia pestis Angola, complete genome02006BLASTN svgBLASTP svg
NC_010159:12086991208699123266623968Yersinia pestis Angola, complete genome01968BLASTN svgBLASTP svg
NC_013508:16874321687432172109933668Edwardsiella tarda EIB202, complete genome01768BLASTN svgBLASTP svg
NC_013508:31889783188978324937660399Edwardsiella tarda EIB202, complete genome01768BLASTN svgBLASTP svg
NC_013508:35930003593000361400721008Edwardsiella tarda EIB202, complete genome01766BLASTN svgBLASTP svg
NC_013508:26348*263485519528848Edwardsiella tarda EIB202, complete genome01766BLASTN svgBLASTP svg
NC_013508:2587913*2587913262259934687Edwardsiella tarda EIB202, complete genome01766BLASTN svgBLASTP svg
NC_013508:1491945*1491945152068628742Edwardsiella tarda EIB202, complete genome01766BLASTN svgBLASTP svg
NC_013508:1289159*1289159133392244764Edwardsiella tarda EIB202, complete genome01766BLASTN svgBLASTP svg
NC_013508:876431*87643191551339083Edwardsiella tarda EIB202, complete genome01758BLASTN svgBLASTP svg
NC_005810:31423843142384317894536562Yersinia pestis biovar Microtus str. 91001, complete genome01685BLASTN svgBLASTP svg
NC_008150:51378351378354909935317Yersinia pestis Antiqua, complete genome01679BLASTN svgBLASTP svg
NC_007607:870008700012362836629Shigella dysenteriae Sd197 plasmid pSD1_197, complete sequence01526BLASTN svgBLASTP svg
NC_010660:864458644510942022976Shigella boydii CDC 3083-94 plasmid pBS512_211, complete sequence01263BLASTN svgBLASTP svg
NC_010158:928199281911499922181Yersinia pestis Angola plasmid pMT-pPCP, complete sequence0844BLASTN svgBLASTP svg
NC_013716:50202045020204504905228849Citrobacter rodentium ICC168, complete genome6e-107396BLASTN svgBLASTP svg
NC_004851:15767515767518009922425Shigella flexneri 2a str. 301 plasmid pCP301, complete sequence4e-83317BLASTN svgBLASTP svg
NC_020260:3004500*3004500302796523466Cronobacter sakazakii Sp291, complete genome8e-57230BLASTN svgBLASTP svg
NC_009778:29512072951207297908827882Enterobacter sakazakii ATCC BAA-894, complete genome8e-57230BLASTN svgBLASTP svg
NC_009832:37032023703202372686423663Serratia proteamaculans 568, complete genome7e-48200BLASTN svgBLASTP svg
NC_015663:54942554942558284933425Enterobacter aerogenes KCTC 2190 chromosome, complete genome6e-39170BLASTN svgBLASTP svg
NC_008150:65089965089967359922701Yersinia pestis Antiqua, complete genome4e-31145BLASTN svgBLASTP svg
NC_010634:33680003368000339029322294Yersinia pseudotuberculosis PB1/+, complete genome5e-27131BLASTN svgBLASTP svg
NC_006155:34564883456488347575719270Yersinia pseudotuberculosis IP 32953, complete genome5e-27131BLASTN svgBLASTP svg
NC_006155:28938022893802291787224071Yersinia pseudotuberculosis IP 32953, complete genome8e-20107BLASTN svgBLASTP svg
NC_006155:11913071191307123066739361Yersinia pseudotuberculosis IP 32953, complete genome8e-20107BLASTN svgBLASTP svg
NC_005810:87267287267291210839437Yersinia pestis biovar Microtus str. 91001, complete genome8e-20107BLASTN svgBLASTP svg
NC_005810:29053622905362292838523024Yersinia pestis biovar Microtus str. 91001, complete genome8e-20107BLASTN svgBLASTP svg
NC_004088:16229411622941164556522625Yersinia pestis KIM, complete genome8e-20107BLASTN svgBLASTP svg
NC_004088:11968751196875123427537401Yersinia pestis KIM, complete genome8e-20107BLASTN svgBLASTP svg
NC_003143:33468343346834337009923266Yersinia pestis CO92, complete genome8e-20107BLASTN svgBLASTP svg
NC_006155:30407693040769306409923331Yersinia pseudotuberculosis IP 32953, complete genome8e-20107BLASTN svgBLASTP svg
NC_006155:32127963212796323445221657Yersinia pseudotuberculosis IP 32953, complete genome8e-20107BLASTN svgBLASTP svg
NC_010634:28108152810815283272221908Yersinia pseudotuberculosis PB1/+, complete genome8e-20107BLASTN svgBLASTP svg
NC_010634:11754041175404121321037807Yersinia pseudotuberculosis PB1/+, complete genome8e-20107BLASTN svgBLASTP svg
NC_010465:22828742282874230925826385Yersinia pseudotuberculosis YPIII, complete genome8e-20107BLASTN svgBLASTP svg
NC_010465:15506171550617157325522639Yersinia pseudotuberculosis YPIII, complete genome8e-20107BLASTN svgBLASTP svg
NC_010159:28784992878499290014121643Yersinia pestis Angola, complete genome8e-20107BLASTN svgBLASTP svg
NC_008150:24518722451872247509923228Yersinia pestis Antiqua, complete genome8e-20107BLASTN svgBLASTP svg
NC_008149:15565811556581157548818908Yersinia pestis Nepal516, complete genome8e-20107BLASTN svgBLASTP svg
NC_006155:35961203596120363277836659Yersinia pseudotuberculosis IP 32953, complete genome3e-19105BLASTN svgBLASTP svg
NC_008150:25996612599661262209922439Yersinia pestis Antiqua, complete genome3e-19105BLASTN svgBLASTP svg
NC_010159:409500*40950045168242183Yersinia pestis Angola, complete genome3e-19105BLASTN svgBLASTP svg
NC_010634:3269010*3269010329227823269Yersinia pseudotuberculosis PB1/+, complete genome3e-19105BLASTN svgBLASTP svg
NC_010634:35098803509880354653836659Yersinia pseudotuberculosis PB1/+, complete genome3e-19105BLASTN svgBLASTP svg
NC_012214:20190002019000204685227853Erwinia pyrifoliae Ep1/96, complete genome1e-18103BLASTN svgBLASTP svg
NC_010634:28946312894631293584741217Yersinia pseudotuberculosis PB1/+, complete genome1e-18103BLASTN svgBLASTP svg
NC_006155:29795002979500301649636997Yersinia pseudotuberculosis IP 32953, complete genome1e-18103BLASTN svgBLASTP svg
NC_005810:25496802549680258809938420Yersinia pestis biovar Microtus str. 91001, complete genome2e-1799.6BLASTN svgBLASTP svg
NC_004088:1851500*1851500188954638047Yersinia pestis KIM, complete genome2e-1799.6BLASTN svgBLASTP svg
NC_004088:18018191801819182425322435Yersinia pestis KIM, complete genome2e-1799.6BLASTN svgBLASTP svg
NC_003143:28493772849377287209922723Yersinia pestis CO92, complete genome2e-1799.6BLASTN svgBLASTP svg
NC_003143:28045002804500282209917600Yersinia pestis CO92, complete genome2e-1799.6BLASTN svgBLASTP svg
NC_005810:26134562613456263609922644Yersinia pestis biovar Microtus str. 91001, complete genome2e-1799.6BLASTN svgBLASTP svg
NC_008149:24111612411161243409922939Yersinia pestis Nepal516, complete genome2e-1799.6BLASTN svgBLASTP svg
NC_010159:18185001818500183609917600Yersinia pestis Angola, complete genome2e-1799.6BLASTN svgBLASTP svg
NC_010159:18614651861465188409922635Yersinia pestis Angola, complete genome2e-1799.6BLASTN svgBLASTP svg
NC_010465:17240001724000174609922100Yersinia pseudotuberculosis YPIII, complete genome2e-1799.6BLASTN svgBLASTP svg
NC_010634:29600002960000298209922100Yersinia pseudotuberculosis PB1/+, complete genome2e-1799.6BLASTN svgBLASTP svg
NC_010634:31291743129174315220423031Yersinia pseudotuberculosis PB1/+, complete genome2e-1799.6BLASTN svgBLASTP svg
NC_015224:27903727903730366824632Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,2e-1799.6BLASTN svgBLASTP svg
NC_003143:31159333115933313845922527Yersinia pestis CO92, complete genome1e-1593.7BLASTN svgBLASTP svg
NC_004088:12657301265730129020024471Yersinia pestis KIM, complete genome1e-1593.7BLASTN svgBLASTP svg
NC_005810:12309761230976125037019395Yersinia pestis biovar Microtus str. 91001, complete genome1e-1593.7BLASTN svgBLASTP svg
NC_008149:11956141195614122004824435Yersinia pestis Nepal516, complete genome1e-1593.7BLASTN svgBLASTP svg
NC_008150:28226892822689284340720719Yersinia pestis Antiqua, complete genome1e-1593.7BLASTN svgBLASTP svg
NC_015224:10673901067390110671739328Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,1e-1593.7BLASTN svgBLASTP svg
NC_010465:86840286840289578227381Yersinia pseudotuberculosis YPIII, complete genome2e-1489.7BLASTN svgBLASTP svg
NC_010634:37625323762532378424921718Yersinia pseudotuberculosis PB1/+, complete genome4e-1281.8BLASTN svgBLASTP svg
NC_006155:38463153846315387119324879Yersinia pseudotuberculosis IP 32953, complete genome4e-1281.8BLASTN svgBLASTP svg
NC_003143:31912463191246321275521510Yersinia pestis CO92, complete genome3e-1075.8BLASTN svgBLASTP svg
NC_005810:3021913*3021913304567123759Yersinia pestis biovar Microtus str. 91001, complete genome3e-1075.8BLASTN svgBLASTP svg
NC_008150:25747942574794259632821535Yersinia pestis Antiqua, complete genome3e-1075.8BLASTN svgBLASTP svg
NC_010465:14271701427170145224325074Yersinia pseudotuberculosis YPIII, complete genome3e-1075.8BLASTN svgBLASTP svg
NC_015663:18690001869000191219543196Enterobacter aerogenes KCTC 2190 chromosome, complete genome1e-0973.8BLASTN svgBLASTP svg
NC_009801:2898426*2898426294876250337Escherichia coli E24377A, complete genome1e-0973.8BLASTN svgBLASTP svg
NC_006155:3779381*3779381380559426214Yersinia pseudotuberculosis IP 32953, complete genome4e-0971.9BLASTN svgBLASTP svg
NC_010634:3692321*3692321371595823638Yersinia pseudotuberculosis PB1/+, complete genome4e-0971.9BLASTN svgBLASTP svg
NC_015224:13910881391088142166930582Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,3e-0765.9BLASTN svgBLASTP svg
NC_012560:36986973698697372152322827Azotobacter vinelandii DJ, complete genome1e-0663.9BLASTN svgBLASTP svg
NC_012560:5019900*5019900505162031721Azotobacter vinelandii DJ, complete genome1e-0663.9BLASTN svgBLASTP svg
NC_012560:898416*89841692558327168Azotobacter vinelandii DJ, complete genome1e-0663.9BLASTN svgBLASTP svg
NC_015224:2061951*2061951208443822488Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,1e-0663.9BLASTN svgBLASTP svg
NC_021150:36986963698696372152222827Azotobacter vinelandii CA6, complete genome1e-0663.9BLASTN svgBLASTP svg
NC_021150:5019887*5019887505160731721Azotobacter vinelandii CA6, complete genome1e-0663.9BLASTN svgBLASTP svg
NC_021150:898428*89842892559527168Azotobacter vinelandii CA6, complete genome1e-0663.9BLASTN svgBLASTP svg
NC_015224:3892972*3892972393636443393Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,4e-0661.9BLASTN svgBLASTP svg
NC_015224:27019142701914272426222349Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,4e-0661.9BLASTN svgBLASTP svg
NC_015224:17031301703130172897125842Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,4e-0661.9BLASTN svgBLASTP svg