Pre_GI: BLASTP Hits

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Query: NC_017154:848500:866590 Yersinia pestis D106004 chromosome, complete genome

Start: 866590, End: 868407, Length: 1818

Host Lineage: Yersinia pestis; Yersinia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Specific virulence factors are encoded within pathogenicity islands (PAIs) that are required for the invasive phenotype associated with Yersinia infections. One key virulence plasmid contained by the three human-specific pathogens is pCD1/pYv, which encodes a type III secretion system for the delivery of virulence proteins that contribute to internalization into the host cell. It is the causative agent of plague (bubonic and pulmonary) a devastating disease which has killed millions worldwide. The organism can be transmitted from rats to humans through the bite of an infected flea or from human-to-human through the air during widespread infection. Yersinia pestis is an extremely pathogenic organism that requires very few numbers in order to cause disease, and is often lethal if left untreated. The organism is enteroinvasive, and can survive and propagate in macrophages prior to spreading systemically throughout the host. Yersinia pestis also contains a PAI on the chromosome that is similar to the SPI-2 PAI from Salmonella that allows intracellular survival in the organism.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017168:4509918:4522652452265245244691818Yersinia pestis A1122 chromosome, complete genomeputative antigenic leucine-rich repeat protein01216
NC_008150:3711953:3727411372741137292281818Yersinia pestis Antiqua, complete genomeputative antigenic leucine-rich repeat protein01216
NC_008149:3648139:3666229366622936680551827Yersinia pestis Nepal516, complete genomeantigenic leucine-rich repeat protein01210
NC_010465:804249:8208868208868227331848Yersinia pseudotuberculosis YPIII, complete genomeantigenic leucine-rich repeat protein01008
NC_017168:4509918:4526115452611545279951881Yersinia pestis A1122 chromosome, complete genomeputative antigenic leucine-rich repeat protein0985
NC_008149:3648139:3669702366970236715821881Yersinia pestis Nepal516, complete genomeantigenic leucine-rich repeat protein0985
NC_008150:3711953:3723173372317337250531881Yersinia pestis Antiqua, complete genomeputative antigenic leucine-rich repeat protein0985
NC_017154:848500:8700868700868719331848Yersinia pestis D106004 chromosome, complete genomeantigenic leucine-rich repeat protein0967
NC_010465:804249:8173048173048191721869Yersinia pseudotuberculosis YPIII, complete genomeputative antigenic leucine-rich repeat protein0884
NC_017168:4509918:452467745246774525552876Yersinia pestis A1122 chromosome, complete genomeputative antigenic leucine-rich repeat protein5e-117422
NC_017154:848500:868615868615869490876Yersinia pestis D106004 chromosome, complete genomeputative antigenic leucine-rich repeat protein5e-117422
NC_008149:3648139:366826436682643669139876Yersinia pestis Nepal516, complete genomeantigenic leucine-rich repeat protein5e-117422
NC_008150:3711953:372561637256163726491876Yersinia pestis Antiqua, complete genomeputative antigenic leucine-rich repeat protein5e-117422
NC_010465:804249:819734819734820639906Yersinia pseudotuberculosis YPIII, complete genomeantigenic leucine-rich repeat protein1e-115417
NC_007384:1320287:1346060134606013478111752Shigella sonnei Ss046, complete genomeinvasion plasmid antigen5e-106385
NC_012125:1517925:1537079153707915392652187Salmonella enterica subsp. enterica serovar Paratyphi C strainhypothetical protein6e-103375
NC_004851:191709:2131522131522148791728Shigella flexneri 2a str. 301 plasmid pCP301, complete sequenceinvasion plasmid antigen, secreted by the Mxi-Spa secretion machinery8e-100364
NC_017319:192482:2130342130342147611728Shigella flexneri 2002017 plasmid pSFxv_1, complete sequenceinvasion plasmid antigen, secreted by the Mxi-Spa secretion machinery8e-100364
NC_010067:191190:1956651956651977012037Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein8e-99361
NC_010067:892729:9070099070099092762268Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein5e-98358
NC_004631:685357:7045107045107068762367Salmonella enterica subsp. enterica serovar Typhi Ty2, completesecreted effector protein2e-97357
NC_003198:2297837:2297837229783723002032367Salmonella enterica subsp. enterica serovar Typhi str. CT18,secreted effector protein2e-97357
NC_016832:687000:7044647044647068302367Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,E3 ubiquitin-protein ligase sspH22e-97357
NC_011205:2462025:2462025246202524643912367Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853hypothetical protein2e-97357
NC_011294:2334979:2334979233497923373452367Salmonella enterica subsp. enterica serovar Enteritidis strsecreted effector protein2e-97357
NC_011149:1236689:1237394123739412397242331Salmonella enterica subsp. enterica serovar Agona str. SL483,leucine-rich repeat protein2e-97357
NC_011080:2342672:2342672234267223450382367Salmonella enterica subsp. enterica serovar Newport str. SL254,leucine-rich repeat protein5e-97355
NC_016856:1326503:1332051133205113341532103Salmonella enterica subsp. enterica serovar Typhimurium str. 14028SSspH11e-96354
NC_010102:683444:7025587025587049242367Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein9e-97354
NC_011083:2375061:2388465238846523908312367Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,leucine-rich repeat protein9e-97354
NC_003197:2327474:2340885234088523432512367Salmonella typhimurium LT2, complete genomeleucine-rich repeat protein9e-97354
NC_016810:2325190:2338601233860123409672367Salmonella enterica subsp. enterica serovar Typhimurium strsecreted effector protein9e-97354
NC_016856:2379027:2392438239243823948042367Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Shypothetical protein9e-97354
NC_016857:2325190:2338601233860123409672367Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74hypothetical protein9e-97354
NC_016860:2323017:2336428233642823387942367Salmonella enterica subsp. enterica serovar Typhimurium strleucine-rich repeat protein9e-97354
NC_016863:2324293:2340630234063023429962367Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1hypothetical protein9e-97354
NC_017046:2324554:2337965233796523403312367Salmonella enterica subsp. enterica serovar Typhimurium str. 798secreted effector protein9e-97354
NC_004741:2009769:2023205202320520248481644Shigella flexneri 2a str. 2457T, complete genomeinvasion plasmid antigen2e-95350
NC_017328:2090679:2102130210213021037731644Shigella flexneri 2002017 chromosome, complete genomeInvasion plasmid antigen2e-95350
NC_008258:2045000:2055196205519620568391644Shigella flexneri 5 str. 8401, complete genomeinvasion plasmid antigen4e-95349
NC_007613:1038000:1044320104432010459631644Shigella boydii Sb227, complete genomeinvasion plasmid antigen8e-95348
NC_015761:1181186:1188971118897111914122442Salmonella bongori NCTC 12419, complete genomeleucine rich repeat virulence protein7e-93342
NC_012779:1286500:1320729132072913231072379Edwardsiella ictaluri 93-146, complete genomeleucine-rich repeat protein1e-92341
NC_015761:1181186:1206110120611012087912682Salmonella bongori NCTC 12419, complete genomeleucine rich-repeat virulence protein1e-86321
NC_012779:1286500:1318047131804713201612115Edwardsiella ictaluri 93-146, complete genomeSspH11e-82307
NC_004463:2059500:2059723205972320614801758Bradyrhizobium japonicum USDA 110, complete genomehypothetical protein2e-75283
NC_017249:8165826:8165826816582681675711746Bradyrhizobium japonicum USDA 6, complete genomehypothetical protein2e-75283
NC_007607:87000:1104271104271119711545Shigella dysenteriae Sd197 plasmid pSD1_197, complete sequenceinvasion plasmid antigen, fragment1e-63244
NC_010067:1782998:1799793179979318009831191Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein1e-48194
NC_010634:3155741:3157433315743331585721140Yersinia pseudotuberculosis PB1/+, complete genomehypothetical protein2e-44180
NC_006155:3237990:3239683323968332408221140Yersinia pseudotuberculosis IP 32953, complete genomeputative antigenic leucine-rich repeat protein2e-44180
NC_004463:1898648:194677319467731947111339Bradyrhizobium japonicum USDA 110, complete genomehypothetical protein2e-1687.8
NC_017249:8283701:831025483102548310592339Bradyrhizobium japonicum USDA 6, complete genomehypothetical protein2e-1687.8
NC_010337:98974:1205681205681293908823Heliobacterium modesticaldum Ice1, complete genomemultidomain protein with s-layer homology region, glug motif, ig motif, i-set domain, pkd domain2e-1274.7
NC_008255:3331613:3332977333297733352682292Cytophaga hutchinsonii ATCC 33406, complete genomeconserved hypothetical protein with multiple leucine-rich repeat domains2e-0964.7
NC_007969:1095438:1113443111344311155842142Psychrobacter cryohalolentis K5, complete genomeLeucine-rich repeat, typical subtype6e-0859.7
NC_010465:1550617:1557603155760315588351233Yersinia pseudotuberculosis YPIII, complete genomehypothetical protein1e-0655.5
NC_005810:2905362:2922033292203329232651233Yersinia pestis biovar Microtus str. 91001, complete genomehypothetical protein8e-0652.8
NC_010159:2878499:2893789289378928950211233Yersinia pestis Angola, complete genomehypothetical protein8e-0652.8
NC_009381:2373847:2389135238913523903671233Yersinia pestis Pestoides F chromosome, complete genomehypothetical protein8e-0652.8
NC_008150:2451872:2468535246853524697671233Yersinia pestis Antiqua, complete genomehypothetical protein9e-0652.4
NC_004088:1622941:1629908162990816311401233Yersinia pestis KIM, complete genomehypothetical protein9e-0652.4
NC_003143:3346834:3363505336350533647371233Yersinia pestis CO92, complete genomehypothetical protein9e-0652.4
NC_008149:1556581:1559831155983115610631233Yersinia pestis Nepal516, complete genomehypothetical protein9e-0652.4
NC_014029:3401238:3417909341790934191411233Yersinia pestis Z176003 chromosome, complete genomehypothetical protein9e-0652.4
NC_017154:3344273:3360944336094433621761233Yersinia pestis D106004 chromosome, complete genomehypothetical protein9e-0652.4
NC_017160:3326199:3342870334287033441021233Yersinia pestis D182038 chromosome, complete genomehypothetical protein9e-0652.4
NC_017168:2394079:2397329239732923985611233Yersinia pestis A1122 chromosome, complete genometype III secretion protein GogB9e-0652.4
NC_017265:1346685:1349070134907013503021233Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,hypothetical protein9e-0652.4
NC_010634:3129174:3145850314585031470821233Yersinia pseudotuberculosis PB1/+, complete genomehypothetical protein9e-0652.4