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Query: NC_017154:734875:743335 Yersinia pestis D106004 chromosome, complete genome

Start: 743335, End: 743916, Length: 582

Host Lineage: Yersinia pestis; Yersinia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Specific virulence factors are encoded within pathogenicity islands (PAIs) that are required for the invasive phenotype associated with Yersinia infections. One key virulence plasmid contained by the three human-specific pathogens is pCD1/pYv, which encodes a type III secretion system for the delivery of virulence proteins that contribute to internalization into the host cell. It is the causative agent of plague (bubonic and pulmonary) a devastating disease which has killed millions worldwide. The organism can be transmitted from rats to humans through the bite of an infected flea or from human-to-human through the air during widespread infection. Yersinia pestis is an extremely pathogenic organism that requires very few numbers in order to cause disease, and is often lethal if left untreated. The organism is enteroinvasive, and can survive and propagate in macrophages prior to spreading systemically throughout the host. Yersinia pestis also contains a PAI on the chromosome that is similar to the SPI-2 PAI from Salmonella that allows intracellular survival in the organism.

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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017265:3724500:373743037374303738263834Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,Type II/IV secretion system protein TadC,associated with Flp pilus assembly2e-85314
NC_004088:3859173:387207038720703872903834Yersinia pestis KIM, complete genomehypothetical protein2e-85314
NC_008149:650706:659167659167660000834Yersinia pestis Nepal516, complete genomehypothetical protein2e-85314
NC_005810:3333000:334157133415713342404834Yersinia pestis biovar Microtus str. 91001, complete genomehypothetical protein2e-85314
NC_010634:3905369:392231239223123923145834Yersinia pseudotuberculosis PB1/+, complete genometype II secretion system protein2e-85314
NC_010159:259695:272592272592273425834Yersinia pestis Angola, complete genometype II secretion system protein2e-85314
NC_008150:3430000:344295234429523443785834Yersinia pestis Antiqua, complete genomehypothetical protein2e-85314
NC_009381:522731:531190531190532023834Yersinia pestis Pestoides F chromosome, complete genomehypothetical protein2e-85314
NC_014029:792719:801173801173802006834Yersinia pestis Z176003 chromosome, complete genomehypothetical protein2e-85314
NC_017160:737000:745514745514746347834Yersinia pestis D182038 chromosome, complete genomehypothetical protein2e-85314
NC_017168:341233:354840354840355673834Yersinia pestis A1122 chromosome, complete genomehypothetical protein2e-85314
NC_003143:741169:749629749629750462834Yersinia pestis CO92, complete genomehypothetical protein2e-85314
NC_006155:3992818:401085140108514011684834Yersinia pseudotuberculosis IP 32953, complete genomehypothetical protein6e-85313
NC_009708:692508:701022701022701855834Yersinia pseudotuberculosis IP 31758 chromosome, complete genometype II secretion system protein2e-84311
NC_010465:733916:741391741391742224834Yersinia pseudotuberculosis YPIII, complete genometype II secretion system protein1e-83308
NC_015224:3820338:384678638467863847610825Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,putative tight adherance operon protein8e-57219
NC_008800:3955284:396851239685123969336825Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,putative tight adherance operon protein9e-57219
NC_016513:974402:985732985732986598867Aggregatibacter actinomycetemcomitans ANH9381 chromosome, completeFlp pilus assembly protein TadC6e-26117
NC_013416:668152:679472679472680338867Aggregatibacter actinomycetemcomitans D11S-1, complete genomeTadC7e-26117
NC_012913:167034:175091175091175957867Aggregatibacter aphrophilus NJ8700, complete genomeTadC2e-25115
NC_013716:4306695:437314943731494374000852Citrobacter rodentium ICC168, complete genomeputative tight adherence protein C2e-25115
NC_004605:741000:757085757085757951867Vibrio parahaemolyticus RIMD 2210633 chromosome II, completeputative TadC7e-2097.1
NC_014966:638355:653937653937654815879Vibrio vulnificus MO6-24/O chromosome II, complete sequencetype II/IV secretion system protein TadC, associated with Flp pilus assembly4e-1890.9
NC_005140:660305:675959675959676837879Vibrio vulnificus YJ016 chromosome II, complete sequenceFlp pilus assembly protein TadC1e-1686.3
NC_004460:81687:978079780798217411Vibrio vulnificus CMCP6 chromosome II, complete sequenceFlp pilus assembly protein TadC1e-1272.8