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Query: NC_017154:734875:741555 Yersinia pestis D106004 chromosome, complete genome

Start: 741555, End: 742127, Length: 573

Host Lineage: Yersinia pestis; Yersinia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Specific virulence factors are encoded within pathogenicity islands (PAIs) that are required for the invasive phenotype associated with Yersinia infections. One key virulence plasmid contained by the three human-specific pathogens is pCD1/pYv, which encodes a type III secretion system for the delivery of virulence proteins that contribute to internalization into the host cell. It is the causative agent of plague (bubonic and pulmonary) a devastating disease which has killed millions worldwide. The organism can be transmitted from rats to humans through the bite of an infected flea or from human-to-human through the air during widespread infection. Yersinia pestis is an extremely pathogenic organism that requires very few numbers in order to cause disease, and is often lethal if left untreated. The organism is enteroinvasive, and can survive and propagate in macrophages prior to spreading systemically throughout the host. Yersinia pestis also contains a PAI on the chromosome that is similar to the SPI-2 PAI from Salmonella that allows intracellular survival in the organism.

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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017265:3724500:373947137394713740043573Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,hypothetical protein2e-97354
NC_004088:3859173:387411138741113874683573Yersinia pestis KIM, complete genomehypothetical protein2e-97354
NC_010159:259695:274633274633275205573Yersinia pestis Angola, complete genomehypothetical protein2e-97354
NC_006155:3992818:401289240128924013464573Yersinia pseudotuberculosis IP 32953, complete genomehypothetical protein2e-97354
NC_005810:3333000:333979133397913340363573Yersinia pestis biovar Microtus str. 91001, complete genomehypothetical protein2e-97354
NC_008150:3430000:344499334449933445565573Yersinia pestis Antiqua, complete genomehypothetical protein2e-97354
NC_009381:522731:529410529410529982573Yersinia pestis Pestoides F chromosome, complete genomehypothetical protein2e-97354
NC_009708:692508:699242699242699814573Yersinia pseudotuberculosis IP 31758 chromosome, complete genomehypothetical protein2e-97354
NC_014029:792719:799393799393799965573Yersinia pestis Z176003 chromosome, complete genomehypothetical protein2e-97354
NC_017160:737000:743734743734744306573Yersinia pestis D182038 chromosome, complete genomehypothetical protein2e-97354
NC_017168:341233:356881356881357453573Yersinia pestis A1122 chromosome, complete genomehypothetical protein2e-97354
NC_010634:3905369:392434939243493924921573Yersinia pseudotuberculosis PB1/+, complete genomehypothetical protein1e-96351
NC_010465:733916:739611739611740183573Yersinia pseudotuberculosis YPIII, complete genomehypothetical protein2e-96350
NC_003143:741169:747849747849748355507Yersinia pestis CO92, complete genomehypothetical protein6e-84309
NC_008149:650706:657447657447657959513Yersinia pestis Nepal516, complete genomehypothetical protein1e-83308
NC_015224:3820338:384880538488053849383579Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,putative tight adherance operon protein2e-46185
NC_008800:3955284:397054339705433971121579Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,putative tight adherance operon protein2e-45181
NC_012913:167034:173086173086173688603Aggregatibacter aphrophilus NJ8700, complete genomeTadF2e-1272
NC_016513:974402:983743983743984321579Aggregatibacter actinomycetemcomitans ANH9381 chromosome, completeFlp pilus assembly protein TadF1e-0963.2
NC_013716:4306695:437943943794394380050612Citrobacter rodentium ICC168, complete genomeputative tight adherence protein TadF2e-0962