Pre_GI: BLASTP Hits

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Query: NC_017154:3576256:3595909 Yersinia pestis D106004 chromosome, complete genome

Start: 3595909, End: 3596709, Length: 801

Host Lineage: Yersinia pestis; Yersinia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Specific virulence factors are encoded within pathogenicity islands (PAIs) that are required for the invasive phenotype associated with Yersinia infections. One key virulence plasmid contained by the three human-specific pathogens is pCD1/pYv, which encodes a type III secretion system for the delivery of virulence proteins that contribute to internalization into the host cell. It is the causative agent of plague (bubonic and pulmonary) a devastating disease which has killed millions worldwide. The organism can be transmitted from rats to humans through the bite of an infected flea or from human-to-human through the air during widespread infection. Yersinia pestis is an extremely pathogenic organism that requires very few numbers in order to cause disease, and is often lethal if left untreated. The organism is enteroinvasive, and can survive and propagate in macrophages prior to spreading systemically throughout the host. Yersinia pestis also contains a PAI on the chromosome that is similar to the SPI-2 PAI from Salmonella that allows intracellular survival in the organism.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017265:3375463:339546133954613396261801Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,Na+-translocating NADH-quinone reductase subunit C4e-136483
NC_005810:754340:754340754340755197858Yersinia pestis biovar Microtus str. 91001, complete genomeNa(+)-translocating NADH-quinone reductase subunit C5e-136483
NC_004088:1075454:107460410746041075461858Yersinia pestis KIM, complete genomeNa(+)-translocating NADH-quinone reductase subunit C5e-136483
NC_008149:1002453:100166010016601002460801Yersinia pestis Nepal516, complete genomeNa+-translocating NADH-quinone reductase subunit C4e-136483
NC_003143:3583468:360312136031213603921801Yersinia pestis CO92, complete genomeNa(+)-translocating NADH-quinone reductase subunit C4e-136483
NC_008150:3015000:303479930347993035599801Yersinia pestis Antiqua, complete genomeNa+-translocating NADH-quinone reductase subunit C4e-136483
NC_010159:3502350:352203135220313522831801Yersinia pestis Angola, complete genomeNADH:ubiquinone oxidoreductase, Na(+)-translocating, C subunit4e-136483
NC_009381:3228500:324738532473853248185801Yersinia pestis Pestoides F chromosome, complete genomeNa(+)-translocating NADH-quinone reductase subunit C4e-136483
NC_014029:3633955:365360836536083654408801Yersinia pestis Z176003 chromosome, complete genomeNa(+)-translocating NADH-quinone reductase subunit C4e-136483
NC_017160:3560153:357980635798063580606801Yersinia pestis D182038 chromosome, complete genomeNa(+)-translocating NADH-quinone reductase subunit C4e-136483
NC_017168:2158839:215804621580462158846801Yersinia pestis A1122 chromosome, complete genomeNa(+)-translocating NADH-quinone reductase subunit C4e-136483
NC_010634:1056441:105644110564411057241801Yersinia pseudotuberculosis PB1/+, complete genomeNADH:ubiquinone oxidoreductase, subunit C4e-135480
NC_010465:3597000:361584636158463616646801Yersinia pseudotuberculosis YPIII, complete genomeNADH:ubiquinone oxidoreductase, subunit C4e-135480
NC_006155:1074298:107429810742981075098801Yersinia pseudotuberculosis IP 32953, complete genomeNa(+)-translocating NADH-quinone reductase subunit C4e-135480
NC_009708:3542336:356198935619893562789801Yersinia pseudotuberculosis IP 31758 chromosome, complete genomeNa(+)-translocating NADH-quinone reductase subunit C3e-134477
NC_004459:1794540:181872018187201819487768Vibrio vulnificus CMCP6 chromosome I, complete sequenceNa(+)-translocating NADH-quinone reductase subunit C2e-71268
NC_010506:4404377:440962144096214410415795Shewanella woodyi ATCC 51908, complete genomeNADH:ubiquinone oxidoreductase, subunit C6e-54211
NC_015276:2852010:285855028585502859347798Marinomonas mediterranea MMB-1 chromosome, complete genomeNADH:ubiquinone oxidoreductase, subunit C2e-52206
NC_012881:334250:352036352036352815780Desulfovibrio salexigens DSM 2638, complete genomeNADH:ubiquinone oxidoreductase, subunit C2e-52205
NC_016860:4055117:405940140594014060162762Salmonella enterica subsp. enterica serovar Typhimurium strNa(+)-translocating NADH-quinone reductase subunit C3e-41169
NC_011749:34056:383403834039155816Escherichia coli UMN026 plasmid p1ESCUM, complete sequenceNa(+)-translocating NADH-quinone reductase subunit C2e-41169
NC_013939:1927424:193778619377861938553768Deferribacter desulfuricans SSM1, complete genomeNa(+)-translocating NADH-quinone reductase subunit C4e-39161
NC_015571:1265121:128446012844601285194735Porphyromonas gingivalis TDC60, complete genomeNa(+)-translocating NADH-quinone reductase, subunit C7e-1581.3
NC_010376:1175916:119225711922571192862606Finegoldia magna ATCC 29328, complete genomesodium-translocating NADH-quinone reductase subunit C2e-0859.3
NC_014484:371500:388915388915389583669Spirochaeta thermophila DSM 6192 chromosome, complete genomehypothetical protein6e-0754.7
NC_010718:517473:524989524989525522534Natranaerobius thermophilus JW/NM-WN-LF, complete genomeelectron transport complex, RnfABCDGE type, G subunit3e-0652.4