Pre_GI: BLASTP Hits

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Query: NC_017154:3344273:3360944 Yersinia pestis D106004 chromosome, complete genome

Start: 3360944, End: 3362176, Length: 1233

Host Lineage: Yersinia pestis; Yersinia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Specific virulence factors are encoded within pathogenicity islands (PAIs) that are required for the invasive phenotype associated with Yersinia infections. One key virulence plasmid contained by the three human-specific pathogens is pCD1/pYv, which encodes a type III secretion system for the delivery of virulence proteins that contribute to internalization into the host cell. It is the causative agent of plague (bubonic and pulmonary) a devastating disease which has killed millions worldwide. The organism can be transmitted from rats to humans through the bite of an infected flea or from human-to-human through the air during widespread infection. Yersinia pestis is an extremely pathogenic organism that requires very few numbers in order to cause disease, and is often lethal if left untreated. The organism is enteroinvasive, and can survive and propagate in macrophages prior to spreading systemically throughout the host. Yersinia pestis also contains a PAI on the chromosome that is similar to the SPI-2 PAI from Salmonella that allows intracellular survival in the organism.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017265:1346685:1349070134907013503021233Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,hypothetical protein0811
NC_008150:2451872:2468535246853524697671233Yersinia pestis Antiqua, complete genomehypothetical protein0811
NC_004088:1622941:1629908162990816311401233Yersinia pestis KIM, complete genomehypothetical protein0811
NC_003143:3346834:3363505336350533647371233Yersinia pestis CO92, complete genomehypothetical protein0811
NC_008149:1556581:1559831155983115610631233Yersinia pestis Nepal516, complete genomehypothetical protein0811
NC_014029:3401238:3417909341790934191411233Yersinia pestis Z176003 chromosome, complete genomehypothetical protein0811
NC_017160:3326199:3342870334287033441021233Yersinia pestis D182038 chromosome, complete genomehypothetical protein0811
NC_017168:2394079:2397329239732923985611233Yersinia pestis A1122 chromosome, complete genometype III secretion protein GogB0811
NC_009381:2373847:2389135238913523903671233Yersinia pestis Pestoides F chromosome, complete genomehypothetical protein0809
NC_010159:2878499:2893789289378928950211233Yersinia pestis Angola, complete genomehypothetical protein0809
NC_005810:2905362:2922033292203329232651233Yersinia pestis biovar Microtus str. 91001, complete genomehypothetical protein0809
NC_010634:3129174:3145850314585031470821233Yersinia pseudotuberculosis PB1/+, complete genomehypothetical protein0803
NC_010465:1550617:1557603155760315588351233Yersinia pseudotuberculosis YPIII, complete genomehypothetical protein0795
NC_013353:3669500:3675550367555036769141365Escherichia coli O103:H2 str. 12009, complete genomeT3SS effector EspK1e-44180
AP010958:3669500:3675550367555036769141365Escherichia coli O103:H2 str. 12009 DNA, complete genomeT3SS secreted effector EspK-homolog1e-44180
NC_010067:892729:910776910776911675900Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein5e-44179
NC_013364:1477248:1491836149183614931971362Escherichia coli O111:H- str. 11128, complete genomeT3SS secreted effector EspK1e-43177
NC_013008:1513000:1529364152936415307251362Escherichia coli O157:H7 str. TW14359 chromosome, complete genomenon-LEE-encoded type III effector1e-43177
NC_011353:1513000:1529076152907615304371362Escherichia coli O157:H7 str. EC4115 chromosome, complete genomehypothetical protein1e-43177
NC_002695:1571389:1588148158814815895091362Escherichia coli O157:H7 str. Sakai, complete genomehypothetical protein1e-43177
NC_002655:1655944:1672124167212416734851362Escherichia coli O157:H7 EDL933, complete genomehypothetical protein1e-43177
NC_013353:1305712:1319354131935413207151362Escherichia coli O103:H2 str. 12009, complete genomeT3SS effector EspK1e-43177
AP010958:1305712:1319354131935413207151362Escherichia coli O103:H2 str. 12009 DNA, complete genomeT3SS secreted effector EspK-homolog1e-43177
NC_013361:3597812:3606081360608136074421362Escherichia coli O26:H11 str. 11368 chromosome, complete genomeT3SS effector EspK1e-43177
NC_003197:2720726:2728976272897627304691494Salmonella typhimurium LT2, complete genomeleucine-rich repeat protein1e-43177
NC_016856:2773995:2780529278052927820221494Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Shypothetical protein1e-43177
NC_013716:1298932:1313678131367813150391362Citrobacter rodentium ICC168, complete genomeputative T3SS effector protein EspK1e-43177
NC_017046:2717810:2726084272608427275531470Salmonella enterica subsp. enterica serovar Typhimurium str. 798leucine rich hypothetical protein1e-43177
NC_016860:2716152:2724426272442627258951470Salmonella enterica subsp. enterica serovar Typhimurium strhypothetical protein1e-43177
NC_016810:2719779:2726717272671727281861470Salmonella enterica subsp. enterica serovar Typhimurium strleucine rich hypothetical protein1e-43177
NC_011080:2722492:2729050272905027305191470Salmonella enterica subsp. enterica serovar Newport str. SL254,leucine-rich repeat protein1e-43177
NC_016863:2721826:2728740272874027302331494Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1hypothetical protein1e-43177
NC_016857:2719779:2726693272669327281861494Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74hypothetical protein1e-43177
NC_014722:1084616:109763310976331098529897Burkholderia rhizoxinica HKI 454, complete genomehypothetical protein6e-22105
AP010958:1305712:1312636131263613149842349Escherichia coli O103:H2 str. 12009 DNA, complete genomeT3SS secreted effector EspX-homolog4e-0652.8
NC_011353:1513000:1520091152009115224392349Escherichia coli O157:H7 str. EC4115 chromosome, complete genomehypothetical protein4e-0652.8
NC_013353:1305712:1312636131263613149842349Escherichia coli O103:H2 str. 12009, complete genomeT3SS effector EspX4e-0652.8
NC_013361:3597812:3611813361181336141612349Escherichia coli O26:H11 str. 11368 chromosome, complete genomeT3SS effector EspX4e-0652.8
NC_013364:1477248:1484185148418514865332349Escherichia coli O111:H- str. 11128, complete genomeT3SS secreted effector EspX4e-0652.8
NC_002695:1571389:1579163157916315815112349Escherichia coli O157:H7 str. Sakai, complete genomeputative secreted effector protein4e-0652.8