Pre_GI: BLASTP Hits

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Query: NC_017154:3344273:3351725 Yersinia pestis D106004 chromosome, complete genome

Start: 3351725, End: 3353185, Length: 1461

Host Lineage: Yersinia pestis; Yersinia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Specific virulence factors are encoded within pathogenicity islands (PAIs) that are required for the invasive phenotype associated with Yersinia infections. One key virulence plasmid contained by the three human-specific pathogens is pCD1/pYv, which encodes a type III secretion system for the delivery of virulence proteins that contribute to internalization into the host cell. It is the causative agent of plague (bubonic and pulmonary) a devastating disease which has killed millions worldwide. The organism can be transmitted from rats to humans through the bite of an infected flea or from human-to-human through the air during widespread infection. Yersinia pestis is an extremely pathogenic organism that requires very few numbers in order to cause disease, and is often lethal if left untreated. The organism is enteroinvasive, and can survive and propagate in macrophages prior to spreading systemically throughout the host. Yersinia pestis also contains a PAI on the chromosome that is similar to the SPI-2 PAI from Salmonella that allows intracellular survival in the organism.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017265:1346685:1358060135806013595201461Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,putative permease0966
NC_008149:1556581:1568822156882215702821461Yersinia pestis Nepal516, complete genomepermease0966
NC_008150:2451872:2459324245932424607841461Yersinia pestis Antiqua, complete genomeputative permease0966
NC_005810:2905362:2912814291281429142741461Yersinia pestis biovar Microtus str. 91001, complete genomeputative permease0966
NC_010159:2878499:2884576288457628860361461Yersinia pestis Angola, complete genometransporter, solute:sodium symporter (SSS) family0966
NC_003143:3346834:3354286335428633557461461Yersinia pestis CO92, complete genomeputative permease0966
NC_004088:1622941:1638899163889916403591461Yersinia pestis KIM, complete genomepermease0966
NC_009381:2373847:2379924237992423813841461Yersinia pestis Pestoides F chromosome, complete genomepermease0966
NC_014029:3401238:3408690340869034101501461Yersinia pestis Z176003 chromosome, complete genomeputative permease0966
NC_017160:3326199:3333651333365133351111461Yersinia pestis D182038 chromosome, complete genomeputative permease0966
NC_017168:2394079:2406320240632024077801461Yersinia pestis A1122 chromosome, complete genomeputative permease0966
NC_009708:1522281:1531986153198615334461461Yersinia pseudotuberculosis IP 31758 chromosome, complete genomesolute/sodium symporter (SSS) family protein0965
NC_006155:3212796:3218873321887332203331461Yersinia pseudotuberculosis IP 32953, complete genomeputative sodium:solute symporter (SSS) family protein0965
NC_010634:3129174:3136626313662631380861461Yersinia pseudotuberculosis PB1/+, complete genomeNa+/solute symporter0963
NC_010465:1550617:1566589156658915680491461Yersinia pseudotuberculosis YPIII, complete genomeNa+/solute symporter0961
NC_007952:1934249:1940023194002319414951473Burkholderia xenovorans LB400 chromosome 2, complete sequenceNa+/monocarboxylate symporter, SSS family4e-125448
NC_010623:72500:1002351002351017071473Burkholderia phymatum STM815 chromosome 2, complete sequenceNa+/solute symporter4e-93342
NC_014532:2268078:2289051228905122905681518Halomonas elongata DSM 2581, complete genomeK03307 solute:Na+ symporter, SSS family3e-31137
NC_007348:2558500:2575474257547425768561383Ralstonia eutropha JMP134 chromosome 2, complete sequenceNa+/solute symporter3e-29130
NC_016070:719791:7286717286717301371467Thermoproteus tenax Kra 1, complete genomeNa+/proline symporter2e-21103
NC_012588:211633:2317032317032332201518Sulfolobus islandicus M.14.25 chromosome, complete genomeNa+/solute symporter2e-21103
NC_017093:1411532:1418707141870714203561650Actinoplanes missouriensis 431, complete genomeputative sodium:solute symporter8e-21102
NC_014318:10070730:1009739810097398100990531656Amycolatopsis mediterranei U32 chromosome, complete genomesolute:Na+ symporter, SSS family2e-20100
NC_016027:1647110:1686221168622116876091389Gluconacetobacter xylinus NBRC 3288, complete genomeNa+/solute symporter2e-1791.3
NC_016109:5455060:5455060545506054566671608Kitasatospora setae KM-6054, complete genomeputative sodium/solute symporter2e-1790.5
NC_012522:3867167:3886341388634138878251485Rhodococcus opacus B4, complete genomeputative SSS family transporter7e-1789
NC_008260:2442000:2461493246149324649603468Alcanivorax borkumensis SK2, complete genomeNa-solute symporter/sensory box histidinekinase, putative3e-1273.6
NC_013939:1688400:1701781170178117049903210Deferribacter desulfuricans SSM1, complete genomeserine phosphatase4e-1066.6
NC_014330:697429:7031527031527047021551Brachyspira pilosicoli 95/1000 chromosome, complete genomesodium/pantothenate symporter2e-0861.2
NC_019908:2496149:2513904251390425154541551Brachyspira pilosicoli P43/6/78 chromosome, complete genomesodium/pantothenate symporter2e-0861.2
NC_011149:1077589:1081970108197010834811512Salmonella enterica subsp. enterica serovar Agona str. SL483,sodium/proline symporter9e-0755.5
NC_006905:1186895:1191279119127911927871509Salmonella enterica subsp. enterica serovar Choleraesuis strSSS family, major sodium/proline symporter1e-0655.1
NC_003198:1117687:1122071112207111235791509Salmonella enterica subsp. enterica serovar Typhi str. CT18,sodium/proline symporter (proline permease)2e-0654.7
NC_004631:1842050:1857234185723418587421509Salmonella enterica subsp. enterica serovar Typhi Ty2, completesodium/proline symporter2e-0654.7
NC_006511:1770000:1784835178483517863431509Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCCsodium/proline symporter (proline permease)2e-0654.7
NC_011147:1763681:1780018178001817815261509Salmonella enterica subsp. enterica serovar Paratyphi A strsodium/proline symporter2e-0654.7
NC_011080:1209935:1214319121431912158271509Salmonella enterica subsp. enterica serovar Newport str. SL254,sodium/proline symporter2e-0654.3
NC_003197:1207597:1211980121198012134881509Salmonella typhimurium LT2, complete genomemajor sodium/proline symporter2e-0654.3
NC_011083:1216500:1216709121670912182171509Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,sodium/proline symporter2e-0654.3
NC_016857:1163919:1168300116830011698111512Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74major sodium/proline symporter2e-0654.3
NC_012973:49208:5035350353518431491Helicobacter pylori B38 chromosome, complete genomeSymporter, SSS family (Proline Permease); membrane protein2e-0654.3
NC_016148:1877711:1908140190814019098581719Thermovirga lienii DSM 17291 chromosome, complete genomeNa+/solute symporter2e-0654.3
NC_011094:1166271:1170655117065511721631509Salmonella enterica subsp. enterica serovar Schwarzengrund strsodium/proline symporter2e-0654.3
NC_011205:1186097:1190480119048011919881509Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853sodium/proline symporter2e-0654.3
NC_011274:1094379:1098763109876311002711509Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91sodium/proline symporter2e-0654.3
NC_017046:1164176:1168560116856011700681509Salmonella enterica subsp. enterica serovar Typhimurium str. 798sodium/proline symporter (proline permease)2e-0654.3
NC_016863:1165232:1169616116961611711241509Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1major sodium/proline symporter2e-0654.3
NC_016860:1205282:1209666120966612111741509Salmonella enterica subsp. enterica serovar Typhimurium strsodium/proline symporter2e-0654.3
NC_016856:1165941:1170325117032511718331509Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Smajor sodium/proline symporter2e-0654.3
NC_016810:1163919:1168303116830311698111509Salmonella enterica subsp. enterica serovar Typhimurium strsodium/proline symporter (proline permease)2e-0654.3
NC_011294:1085447:1089849108984910913571509Salmonella enterica subsp. enterica serovar Enteritidis strsodium/proline symporter2e-0654.3
NC_016832:1838220:1854084185408418555741491Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,Sodium/proline symporter3e-0653.5
NC_010102:1979742:1994562199456219960521491Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein4e-0653.5
NC_015320:1342105:1360580136058013619561377Archaeoglobus veneficus SNP6 chromosome, complete genomeNa+/solute symporter4e-0653.5
NC_020211:3151458:3169357316935731708411485Serratia marcescens WW4, complete genomeproline:sodium symporter6e-0652.8
NC_016513:1126263:1126263112626311277831521Aggregatibacter actinomycetemcomitans ANH9381 chromosome, completesodium/proline symporter7e-0652.4