Some Help

Query: NC_017154:3094000:3095062 Yersinia pestis D106004 chromosome, complete genome

Start: 3095062, End: 3096099, Length: 1038

Host Lineage: Yersinia pestis; Yersinia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Specific virulence factors are encoded within pathogenicity islands (PAIs) that are required for the invasive phenotype associated with Yersinia infections. One key virulence plasmid contained by the three human-specific pathogens is pCD1/pYv, which encodes a type III secretion system for the delivery of virulence proteins that contribute to internalization into the host cell. It is the causative agent of plague (bubonic and pulmonary) a devastating disease which has killed millions worldwide. The organism can be transmitted from rats to humans through the bite of an infected flea or from human-to-human through the air during widespread infection. Yersinia pestis is an extremely pathogenic organism that requires very few numbers in order to cause disease, and is often lethal if left untreated. The organism is enteroinvasive, and can survive and propagate in macrophages prior to spreading systemically throughout the host. Yersinia pestis also contains a PAI on the chromosome that is similar to the SPI-2 PAI from Salmonella that allows intracellular survival in the organism.

Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia

SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014033:1808782:1828716182871618297191004Prevotella ruminicola 23 chromosome, complete genome3e-0653.1
NC_004088:1291754:131012313101231311088966Yersinia pestis KIM, complete genomehypothetical protein5e-171600
NC_003143:2895617:291397229139722914937966Yersinia pestis CO92, complete genomehypothetical protein5e-171600
NC_008150:2785830:279605327960532796907855Yersinia pestis Antiqua, complete genomehypothetical protein2e-147521
NC_015061:3840463:391367439136743914639966Rahnella sp. Y9602 chromosome, complete genomehypothetical protein7e-32138
NC_008800:3279468:328488332848833285848966Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,hypothetical protein3e-161568
NC_016612:5208936:523412452341245235089966Klebsiella oxytoca KCTC 1686 chromosome, complete genomehypothetical protein1e-33144
NC_015224:1440283:145212714521271453092966Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,hypothetical protein2e-161568
NC_016612:5231065:523412452341245235089966Klebsiella oxytoca KCTC 1686 chromosome, complete genomehypothetical protein1e-33144
NC_008149:1221637:124002412400241240878855Yersinia pestis Nepal516, complete genomemembrane protein2e-147521