Pre_GI: BLASTP Hits

Some Help

Query: NC_017154:1225500:1229802 Yersinia pestis D106004 chromosome, complete genome

Start: 1229802, End: 1230689, Length: 888

Host Lineage: Yersinia pestis; Yersinia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Specific virulence factors are encoded within pathogenicity islands (PAIs) that are required for the invasive phenotype associated with Yersinia infections. One key virulence plasmid contained by the three human-specific pathogens is pCD1/pYv, which encodes a type III secretion system for the delivery of virulence proteins that contribute to internalization into the host cell. It is the causative agent of plague (bubonic and pulmonary) a devastating disease which has killed millions worldwide. The organism can be transmitted from rats to humans through the bite of an infected flea or from human-to-human through the air during widespread infection. Yersinia pestis is an extremely pathogenic organism that requires very few numbers in order to cause disease, and is often lethal if left untreated. The organism is enteroinvasive, and can survive and propagate in macrophages prior to spreading systemically throughout the host. Yersinia pestis also contains a PAI on the chromosome that is similar to the SPI-2 PAI from Salmonella that allows intracellular survival in the organism.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011205:2180598:221599322159932216529537Salmonella enterica subsp. enterica serovar Dublin str. CT_020218533e-1169.3
NC_016810:2871689:292300529230052923880876Salmonella enterica subsp. enterica serovar Typhimurium strDNA-binding bacteriophage protein3e-88325
NC_017046:2896651:292174629217462922621876Salmonella enterica subsp. enterica serovar Typhimurium str. 798DNA-binding bacteriophage protein8e-88323
NC_014029:1283500:128770912877091288596888Yersinia pestis Z176003 chromosome, complete genomeDNA-binding prophage protein6e-165580
NC_016860:2917910:292400529240052924880876Salmonella enterica subsp. enterica serovar Typhimurium strDNA-binding prophage protein3e-88325
NC_017160:1507500:152092215209221521809888Yersinia pestis D182038 chromosome, complete genomeDNA-binding prophage protein6e-165580
NC_016845:4498097:450973145097314510624894Klebsiella pneumoniae subsp. pneumoniae HS11286 chromosome,DNA-binding prophage protein6e-78290
NC_008149:3251196:326447532644753265362888Yersinia pestis Nepal516, complete genomeDNA-binding prophage protein6e-165580
NC_014029:331919:3861313861313871591029Yersinia pestis Z176003 chromosome, complete genomeDNA-binding prophage protein1e-67256
NC_011149:1987291:201844220184422019314873Salmonella enterica subsp. enterica serovar Agona str. SL483,DNA-binding prophage protein4e-93341
NC_011083:2847318:287494528749452875820876Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,DNA-binding prophage protein3e-88325
NC_012962:3864000:387468938746893875579891Photorhabdus asymbiotica, complete genomeDNA-binding prophage protein2e-76285
NC_011149:309556:314876314876315145270Salmonella enterica subsp. enterica serovar Agona str. SL483,DNA-binding prophage protein1e-1067
NC_011274:2044000:207995120799512080649699Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91DNA-binding protein5e-31135
NC_011294:2053991:208881820888182089516699Salmonella enterica subsp. enterica serovar Enteritidis strDNA-binding protein9e-31134
NC_004088:3382148:339541733954173396313897Yersinia pestis KIM, complete genomehypothetical protein4e-165580
NC_012912:4194821:419839941983994199280882Dickeya zeae Ech1591, complete genomehypothetical protein2e-115415
NC_003198:4513900:453839045383904539172783Salmonella enterica subsp. enterica serovar Typhi str. CT18,hypothetical protein1e-80300
NC_009832:426993:438505438505439392888Serratia proteamaculans 568, complete genomehypothetical protein3e-72271
NC_015567:346500:366954366954367841888Serratia sp. AS9 chromosome, complete genomehypothetical protein6e-71267
NC_009832:4564752:458247045824704583357888Serratia proteamaculans 568, complete genomehypothetical protein2e-68259
NC_012125:4536383:454625745462574547177921Salmonella enterica subsp. enterica serovar Paratyphi C strainhypothetical protein1e-58226
NC_010067:4418000:443536744353674436062696Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein6e-56217
NC_010067:3204682:320912132091213209705585Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein1e-23110
NC_010468:1816359:184232618423261843210885Escherichia coli ATCC 8739, complete genomehypothetical protein2e-86319
NC_013421:701005:726654726654727541888Pectobacterium wasabiae WPP163, complete genomehypothetical protein9e-72270
NC_009832:4482500:450178445017844502683900Serratia proteamaculans 568, complete genomehypothetical protein9e-69260
NC_008390:987052:999170999170999670501Burkholderia cepacia AMMD chromosome 1, complete sequencehypothetical protein3e-24112
NC_010102:997417:100171510017151002263549Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein6e-1581.6
NC_010102:997417:100228210022821002413132Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein3e-0859.7
NC_010102:4557037:456536345653634566253891Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein1e-79296
NC_004547:639726:649514649514650404891Erwinia carotovora subsp. atroseptica SCRI1043, complete genomehypothetical protein5e-72271
NC_003198:4453457:446328544632854464205921Salmonella enterica subsp. enterica serovar Typhi str. CT18,hypothetical protein1e-58226
NC_010067:3204682:320879332087933209152360Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein2e-36152
NC_011745:3443371:346552334655233466230708Escherichia coli ED1a chromosome, complete genomehypothetical protein1e-28127
NC_011745:3443371:346525134652513465523273Escherichia coli ED1a chromosome, complete genomehypothetical protein3e-1892.8
NC_009648:4497749:450509445050944505948855Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genomehypothetical protein2e-80298
NC_015566:345084:366768366768367655888Serratia sp. AS12 chromosome, complete genomehypothetical protein6e-71267
NC_010554:2789722:280388628038862804794909Proteus mirabilis HI4320, complete genomehypothetical protein5e-68258
NC_016832:4425330:443515844351584436078921Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,hypothetical protein1e-58226
NC_012779:346998:363213363213363767555Edwardsiella ictaluri 93-146, complete genomehypothetical protein2e-41169
NC_014539:888562:9018529018529029491098Burkholderia sp. CCGE1003 chromosome 1, complete sequencehypothetical protein3e-1995.9
NC_007520:903799:905931905931906827897Thiomicrospira crunogena XCL-2, complete genomehypothetical protein5e-0652
NC_012214:537000:548805548805549689885Erwinia pyrifoliae Ep1/96, complete genomeintegrase4e-77288
NC_013892:1457500:145757914575791458496918Xenorhabdus bovienii SS-2004 chromosome, complete genomeintegrase2e-58225
NC_014304:77715:826108261083503894Erwinia billingiae Eb661 plasmid pEB102, complete sequenceintegrase2e-70266
NC_013592:4295449:430119543011954302076882Dickeya dadantii Ech586, complete genomeintegrase domain protein SAM domain protein6e-116417
NC_007644:362000:365955365955366911957Moorella thermoacetica ATCC 39073, complete genomePhage integrase1e-0757.8
NC_013716:2139952:217095321709532171840888Citrobacter rodentium ICC168, complete genomeputative DNA binding protein2e-88325
NC_010159:1417993:142266414226641423551888Yersinia pestis Angola, complete genomeputative DNA-binding prophage protein6e-165580
NC_005810:1130251:114352111435211144417897Yersinia pestis biovar Microtus str. 91001, complete genomeputative DNA-binding prophage protein4e-165580
NC_008150:650899:655248655248656135888Yersinia pestis Antiqua, complete genomeputative DNA-binding prophage protein6e-165580
NC_014500:443874:458532458532459413882Dickeya dadantii 3937 chromosome, complete genomeputative DNA-binding prophage protein2e-115415
NC_014228:3282500:331576033157603316413654Xenorhabdus nematophila ATCC 19061, complete genomePutative DNA-binding prophage protein3e-74278
NC_017265:1136000:113984211398421140738897Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,putative DNA-binding prophage protein4e-165580
NC_017168:4155143:416052841605284161415888Yersinia pestis A1122 chromosome, complete genomeputative DNA-binding prophage protein6e-165580
NC_012214:3303955:330950333095033310387885Erwinia pyrifoliae Ep1/96, complete genomeputative DNA-binding prophage protein5e-76284
NC_014228:3282500:328352232835223283683162Xenorhabdus nematophila ATCC 19061, complete genomePutative DNA-binding prophage protein2e-0859.7
NC_003143:1233128:123851212385121239408897Yersinia pestis CO92, complete genomeputative DNA-binding prophage protein4e-165580
NC_009381:2939782:295306029530602953947888Yersinia pestis Pestoides F chromosome, complete genomeputative DNA-binding prophage protein6e-165580
NC_012880:4117376:412064241206424121523882Dickeya dadantii Ech703, complete genomeputative DNA-binding prophage protein3e-116418
NC_014121:489500:505868505868506752885Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completeputative DNA-binding prophage protein4e-72271
NC_016831:947281:953938953938954636699Salmonella enterica subsp. enterica serovar Gallinarum/pullorumPutative DNA-binding protein5e-31135
NC_003197:2894344:290043929004392901314876Salmonella typhimurium LT2, complete genomeputative integrase3e-88325
NC_016863:2844883:286891728689172869792876Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1putative integrase3e-88325
NC_014228:3442159:346680934668093467723915Xenorhabdus nematophila ATCC 19061, complete genomeputative integrase6e-59227
NC_016856:2896630:292066429206642921539876Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Sputative integrase3e-88325
NC_016857:2871689:292300529230052923880876Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74putative integrase3e-88325