Pre_GI: BLASTP Hits

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Query: NC_017066:312000:329247 Rickettsia typhi str. TH1527 chromosome, complete genome

Start: 329247, End: 329780, Length: 534

Host Lineage: Rickettsia typhi; Rickettsia; Rickettsiaceae; Rickettsiales; Proteobacteria; Bacteria

General Information: This genus, like other Rickettsial organisms such as Neorickettsia and Anaplasma, is composed of obligate intracellular pathogens. The latter is composed of two organisms, Rickettsia prowazekii and Rickettsia typhi. The bacteria are transmitted via an insect, usually a tick, to a host organism, in this case humans, where they target endothelial cells and sometimes macrophages. They attach via an adhesin, rickettsial outer membrane protein A, and are internalized where they persist as cytoplasmically free organisms. Transovarial transmission (from mother to offspring) occurs in the invertebrate host. This organism causes murine typhus and is an obligate intracellular pathogen that infects both the flea vector and hosts such as human, rat, and mouse. R. prowazekii, and genomic comparisons demonstrate colinearity and similarity to the genome of that organism except for two independent inversions near the origin and terminus. In the flea vector, the bacterium penetrates the gut epithelial barrier and is found in the feces which become infective.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_006142:312000:329233329233329766534Rickettsia typhi str. Wilmington, complete genomeComplex III (mitochondrial electron transport).4e-92336
NC_016915:346000:362881362881363414534Rickettsia rickettsii str. Hlp#2 chromosome, complete genomeubiquinol-cytochrome c reductase iron-sulfur subunit2e-84311
NC_009720:3281000:328321132832113283738528Xanthobacter autotrophicus Py2, complete genomeubiquinol-cytochrome c reductase, iron-sulfur subunit9e-58222
NC_007797:411630:413710413710414279570Anaplasma phagocytophilum HZ, complete genomeubiquinol-cytochrome c reductase, iron-sulfur subunit1e-44179
NC_005295:845000:856280856280856843564Ehrlichia ruminantium str. Welgevonden, complete genomeubiquinol-cytochrome c reductase iron-sulphur subunit2e-44178
NC_006831:821000:832037832037832600564Ehrlichia ruminantium str. Gardel, complete genomeUbiquinol-cytochrome C reductase iron-sulfur subunit2e-44178
NC_006832:825000:836157836157836720564Ehrlichia ruminantium str. Welgevonden, complete genomeUbiquinol-cytochrome C reductase iron-sulfur subunit2e-44178
NC_008347:174000:197614197614198141528Maricaulis maris MCS10, complete genomeubiquinol-cytochrome c reductase, iron-sulfur subunit3e-44177
NC_015580:141379:145089145089145622534Novosphingobium sp. PP1Y, complete genomeubiquinol-cytochrome c reductase iron-sulfur subunit1e-42172
NC_014006:2999500:303853330385333039114582Sphingobium japonicum UT26S chromosome 1, complete genomeubiquinol-cytochrome c reductase iron-sulfur subunit5e-40163
NC_002678:763808:793208793208793738531Mesorhizobium loti MAFF303099, complete genomeubiquinol-cytochrome c reductase iron-sulfur subunit3e-35147
NC_006677:579975:601843601843602475633Gluconobacter oxydans 621H, complete genomeUbiquinol-cytochrome C reductase iron-sulfur subunit1e-28125
NC_014307:533975:538214538214538822609Ralstonia solanacearum CFBP2957 chromosome, complete genomecytochrome bc1 complex ubiquinol:ferricytochrome C oxidoreductase rieske iron-sulfur subunit1e-26119
NC_010682:3313944:335476833547683355376609Ralstonia pickettii 12J chromosome 1, complete sequenceubiquinol-cytochrome c reductase, iron-sulfur subunit3e-26117
NC_012856:3000839:301621330162133016821609Ralstonia pickettii 12D chromosome 1, complete genomeubiquinol-cytochrome c reductase, iron-sulfur subunit5e-26117
NC_015731:3274739:329785432978543298462609Nitrosomonas sp. Is79A3 chromosome, complete genomeubiquinol-cytochrome c reductase, iron-sulfur subunit5e-26117
NC_015381:429940:433678433678434298621Burkholderia gladioli BSR3 chromosome 1, complete sequenceUbiquinol-cytochrome c reductase7e-25113
NC_012724:359444:362733362733363353621Burkholderia glumae BGR1 chromosome 1, complete genomeUbiquinol-cytochrome c reductase6e-24110
NC_007645:6013242:602264860226486023229582Hahella chejuensis KCTC 2396, complete genomeubiquinol-cytochrome c reductase, iron-sulfur subunit1e-23109
NC_011992:773905:780665780665781264600Acidovorax ebreus TPSY, complete genomeubiquinol-cytochrome c reductase, iron-sulfur subunit5e-23107
NC_010508:451184:454948454948455568621Burkholderia cenocepacia MC0-3 chromosome 1, complete sequenceubiquinol-cytochrome c reductase, iron-sulfur subunit2e-22105
NC_008542:483761:486947486947487567621Burkholderia cenocepacia HI2424 chromosome 1, complete sequenceubiquinol-cytochrome c reductase, iron-sulfur subunit2e-22105
NC_008060:2913671:293907829390782939698621Burkholderia cenocepacia AU 1054 chromosome 1, complete sequenceUbiquinol-cytochrome c reductase, iron-sulfur subunit2e-22105
NC_015563:1240978:125701212570121257608597Delftia sp. Cs1-4 chromosome, complete genomeubiquinol-cytochrome c reductase, iron-sulfur subunit4e-22104
NC_010002:6104500:610806361080636108659597Delftia acidovorans SPH-1, complete genomeubiquinol-cytochrome c reductase, iron-sulfur subunit4e-22104
NC_009434:1156834:117260111726011173194594Pseudomonas stutzeri A1501, complete genomeubiquinol--cytochrome c reductase, iron-sulfur subunit3e-22104
NC_009074:3559211:357752735775273578147621Burkholderia pseudomallei 668 chromosome I, complete sequenceubiquinol-cytochrome c reductase, iron-sulfur subunit2e-22104
NC_006350:3710641:372841537284153729038624Burkholderia pseudomallei K96243 chromosome 1, complete sequenceubiquinol-cytochrome c reductase iron-sulfur subunit2e-22104
NC_015740:1017000:103342710334271034020594Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, completeubiquinol--cytochrome c reductase, iron-sulfur subunit4e-22103
NC_016002:3704006:370400637040063704590585Pseudogulbenkiania sp. NH8B, complete genomeubiquinol-cytochrome c reductase, iron-sulfur subunit2e-21101
NC_014323:4619344:464583546458354646443609Herbaspirillum seropedicae SmR1 chromosome, complete genometransmembrane ubiquinol-cytochrome C reductase2e-2098.2
NC_011206:2685499:269410526941052694725621Acidithiobacillus ferrooxidans ATCC 53993, complete genomeubiquinol-cytochrome c reductase, iron-sulfur subunit2e-1994.7
NC_011761:2785660:279426627942662794886621Acidithiobacillus ferrooxidans ATCC 23270 chromosome, completeubiquinol--cytochrome c reductase, iron-sulfur subunit2e-1994.7
NC_015942:3185193:319536631953663195986621Acidithiobacillus ferrivorans SS3 chromosome, complete genomeubiquinol-cytochrome c reductase, iron-sulfur subunit2e-1892
NC_012560:1260031:127038012703801270784405Azotobacter vinelandii DJ, complete genomeubiquinol-cytochrome c reductase, iron-sulfur subunit5e-1684
NC_021150:1258780:127039212703921270796405Azotobacter vinelandii CA6, complete genomeubiquinol-cytochrome c reductase, iron-sulfur subunit5e-1684
NC_011126:1430608:144941014494101449961552Hydrogenobaculum sp. Y04AAS1, complete genomeubiquinol-cytochrome c reductase, iron-sulfur subunit1e-1272.8
NC_015557:1412917:142987414298741430425552Hydrogenobaculum sp. 3684 chromosome, complete genomeubiquinol-cytochrome c reductase, iron-sulfur subunit2e-1272
NC_015587:1414304:142974214297421430293552Hydrogenobaculum sp. SHO chromosome, complete genomeubiquinol-cytochrome c reductase, iron-sulfur subunit2e-1272
NC_014935:1834569:183581218358121836354543Nitratifractor saLSUginis DSM 16511 chromosome, complete genomeubiquinol-cytochrome c reductase, iron-sulfur subunit9e-1269.7
NC_009482:619467:637070637070637606537Synechococcus sp. RCC307 chromosome, complete genomecytochrome b6-f complex iron-sulfur subunit7e-0960.1