Pre_GI: BLASTP Hits

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Query: NC_017044:702483:722084 Rickettsia parkeri str. Portsmouth chromosome, complete genome

Start: 722084, End: 723778, Length: 1695

Host Lineage: Rickettsia parkeri; Rickettsia; Rickettsiaceae; Rickettsiales; Proteobacteria; Bacteria

General Information: Animal pathogen in Mammalia (intracellular obligate). Rickettsiae are obligate intracellular Gram-negative bacteria mostly found in arthropods, some of which cause mild to severe diseases in humans. Rickettsia parkeri, a member of the spotted fever group Rickettsia (SFGR), was first isolated from the Gulf Coast tick, Amblyomma maculatum, in 1937. In 2004, the first confirmed human infection with R. parkeri was reported in a 40-year-old man from the Tidewater area of coastal Virginia. The agent was isolated in cell culture from an eschar biopsy specimen and designated the Portsmouth strain; recently, the first recognized case of tick bite-associated human infection was described.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_010793:1811401:1863476186347618652301755Orientia tsutsugamushi str. Ikeda, complete genomeputative conjugative transfer protein TraD0761
NC_010793:416849:4208424208424225961755Orientia tsutsugamushi str. Ikeda, complete genomeputative conjugative transfer protein TraD0761
NC_010793:1158279:1169124116912411708781755Orientia tsutsugamushi str. Ikeda, complete genomeputative conjugative transfer protein TraD0761
NC_010793:1508974:1513498151349815152521755Orientia tsutsugamushi str. Ikeda, complete genomeputative conjugative transfer protein TraD0761
NC_009488:89844:1125211125211142781758Orientia tsutsugamushi str. Boryong, complete genomeconjugative transfer protein0756
NC_010793:1468849:1468849146884914703841536Orientia tsutsugamushi str. Ikeda, complete genomeputative conjugative transfer protein TraD0643
NC_010793:1628500:1641810164181016428201011Orientia tsutsugamushi str. Ikeda, complete genomeputative conjugative transfer protein TraD2e-127456
NC_009488:1465781:1479205147920514803501146Orientia tsutsugamushi str. Boryong, complete genomeconjugative transfer protein1e-115417
NC_009488:1249492:125489812548981255854957Orientia tsutsugamushi str. Boryong, complete genomeconjugative transfer protein8e-116417
NC_009488:803873:809270809270810226957Orientia tsutsugamushi str. Boryong, complete genomeconjugative transfer protein8e-116417
NC_009488:854500:857766857766858722957Orientia tsutsugamushi str. Boryong, complete genomeconjugative transfer protein7e-116417
NC_009488:1673756:1685432168543216865771146Orientia tsutsugamushi str. Boryong, complete genomeconjugative transfer protein3e-113409
NC_009488:1391975:1405801140580114069461146Orientia tsutsugamushi str. Boryong, complete genomeconjugative transfer protein3e-113409
NC_017028:1030000:104422810442281045058831Candidatus Rickettsia amblyommii str. GAT-30V chromosome, completeputative conjugative transfer protein TraD8e-112404
NC_017044:702483:719163719163719666504Rickettsia parkeri str. Portsmouth chromosome, complete genomeputative conjugative transfer protein TraD8e-74278
NC_009488:1430693:143360714336071434488882Orientia tsutsugamushi str. Boryong, complete genomeconjugative transfer protein4e-69262
NC_009998:62000:7347873478756042127Shewanella baltica OS195 plasmid pS19501, complete sequencetype IV conjugative transfer system coupling protein TraD4e-68259
NC_016846:24500:5201252012542912280Klebsiella pneumoniae subsp. pneumoniae HS11286 plasmid pKPHS2,conjugal transfer protein TraD3e-67256
NC_010606:25090:2655826558287172160Acinetobacter baumannii ACICU plasmid pACICU2, complete sequenceType IV secretory pathway, VirD4 component4e-67256
NC_010660:175200:1802001802001822452046Shigella boydii CDC 3083-94 plasmid pBS512_211, complete sequence2e-63243
NC_007385:157516:1664251664251686262202Shigella sonnei Ss046 plasmid pSS_046, complete sequenceTraD protein2e-63243
NC_007607:87000:9356593565950791515Shigella dysenteriae Sd197 plasmid pSD1_197, complete sequencehypothetical protein9e-62238
NC_004460:708416:7124647124647145572094Vibrio vulnificus CMCP6 chromosome II, complete sequenceType IV secretory pathway, VirD4 component3e-60233
NC_008322:1186000:1186944118694411889171974Shewanella sp. MR-7, complete genomehypothetical protein6e-58225
NC_009787:17344:4718471869492232Escherichia coli E24377A plasmid pETEC_35, complete sequencetype IV conjugative transfer system coupling protein TraD4e-57223
NC_007722:851129:8667998667998691382340Erythrobacter litoralis HTCC2594, complete genomeTraD2e-47191
NC_010793:1287877:130094913009491301482534Orientia tsutsugamushi str. Ikeda, complete genomeputative conjugative transfer protein TraD3e-47190
NC_009879:556000:566600566600566956357Rickettsia canadensis str. McKiel, complete genomePutative conjugative transfer protein TraD9e-44178
NC_009007:57804:7373273732760142283Rhodobacter sphaeroides 2.4.1 plasmid A, partial sequenceTraG3e-42173
NC_007722:2954876:2956825295682529590802256Erythrobacter litoralis HTCC2594, complete genomeTraD1e-41171
NC_007722:168937:1869601869601892992340Erythrobacter litoralis HTCC2594, complete genomeTraD2e-40167
NC_014819:25765:4626046260488752616Asticcacaulis excentricus CB 48 plasmid pASTEX02, completehypothetical protein5e-39162
NC_011296:281930:2970702970702987821713Thermodesulfovibrio yellowstonii DSM 11347, complete genomeputative conjugative transfer protein TraD3e-36153
NC_011891:1225000:1245654124565412471831530Anaeromyxobacter dehalogenans 2CP-1, complete genometype IV secretion system protein VirD43e-35150
NC_015458:327009:3591473591473608261680Pusillimonas sp. T7-7 chromosome, complete genomeTrwB2e-33144
NC_017028:1030000:104246010424601042792333Candidatus Rickettsia amblyommii str. GAT-30V chromosome, completeconjugative transfer protein TraD1e-32141
NC_010170:3908500:3929234392923439308801647Bordetella petrii, complete genometype IV secretion system protein VirD45e-32139
NC_010793:1628500:164122816412281641572345Orientia tsutsugamushi str. Ikeda, complete genomeputative conjugative transfer protein TraD8e-30132
NC_012483:3672768:3674604367460436766042001Acidobacterium capsulatum ATCC 51196, complete genomehypothetical protein1e-27125
NC_009484:2660048:2677156267715626790061851Acidiphilium cryptum JF-5 chromosome, complete genomeType IV secretory pathway VirD4 components-like protein1e-27125
NC_012483:3731542:3752837375283737548311995Acidobacterium capsulatum ATCC 51196, complete genomehypothetical protein2e-27124
NC_011916:467106:4915124915124933291818Caulobacter crescentus NA1000 chromosome, complete genomeconjugation protein, ATP binding domain trwB4e-27123
NC_016631:3917253:3934403393440339363731971Granulicella mallensis MP5ACTX8 chromosome, complete genomeType IV secretion system, TraD, DNA-binding domain protein5e-27123
NC_016626:1751159:1754229175422917558721644Burkholderia sp. YI23 plasmid byi_1p, complete sequenceputative TraB protein, type IV secretion system7e-27122
NC_010793:30488:435634356343829267Orientia tsutsugamushi str. Ikeda, complete genomeputative conjugative transfer protein TraD6e-1686.3
NC_007404:1776147:1776147177614717785012355Thiobacillus denitrificans ATCC 25259, complete genomeputative type IV secretory pathway VirD4 components4e-1583.6
NC_009879:556000:566393566393566539147Rickettsia canadensis str. McKiel, complete genomePutative conjugative transfer protein TraD5e-1273.2
NC_020453:3950838:3988683398868339904941812Agromonas oligotrophica S58 DNA, complete genomeputative type IV secretory pathway VirD4 components1e-1172
NC_009488:57889:710467104671246201Orientia tsutsugamushi str. Boryong, complete genome2e-1171.2
NC_009488:1952640:196481019648101965070261Orientia tsutsugamushi str. Boryong, complete genomeconjugative transfer protein3e-1170.9
NC_011729:2732163:2747512274751227492211710Cyanothece sp. PCC 7424 chromosome, complete genometransfer complex protein TrsK-like protein9e-1168.9
NC_010793:1628500:164157416415741641747174Orientia tsutsugamushi str. Ikeda, complete genomeputative conjugative transfer protein TraD6e-1066.2
NC_013722:3081459:3101807310180731035011695Xanthomonas albilineans, complete genomeputative type iv secretory pathway, conjugal transfer protein1e-0862
NC_013722:2810721:2835935283593528376291695Xanthomonas albilineans, complete genomeputative type iv secretory pathway, conjugal transfer protein2e-0861.2
NC_014502:113839:1141601141601160821923Cyanothece sp. PCC 7822 plasmid Cy782203, complete sequenceTRAG family protein5e-0860.1
NC_011737:102615:1062651062651081811917Cyanothece sp. PCC 7424 plasmid pP742402, complete sequencetransfer complex protein TrsK-like protein2e-0757.8
NC_008781:2655071:2665222266522226672071986Polaromonas naphthalenivorans CJ2, complete genomeTRAG family protein2e-0655.1
NC_009931:117904:1293991293991311741776Acaryochloris marina MBIC11017 plasmid pREB6, complete sequencehypothetical protein2e-0654.3
NC_015259:673662:6761806761806777571578Polymorphum gilvum SL003B-26A1 chromosome, complete genomePlasmid transfer factor, traG4e-0653.5
NC_015259:485015:5308405308405323061467Polymorphum gilvum SL003B-26A1 chromosome, complete genomePlasmid transfer factor, traG6e-0652.8