Pre_GI: BLASTP Hits

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Query: NC_016945:666000:678225 Vibrio cholerae IEC224 chromosome II, complete sequence

Start: 678225, End: 678623, Length: 399

Host Lineage: Vibrio cholerae; Vibrio; Vibrionaceae; Vibrionales; Proteobacteria; Bacteria

General Information: It was isolated in November of 1994 at the city of Belém/Pa from a stool sample. This genus is abundant in marine or freshwater environments such as estuaries, brackish ponds, or coastal areas; regions that provide an important reservoir for the organism in between outbreaks of the disease. Vibrio can affect shellfish, finfish, and other marine animals and a number of species are pathogenic for humans. Vibrio cholerae can colonize the mucosal surface of the small intestines of humans where it will cause cholera, a severe and sudden onset diarrheal disease. One famous outbreak was traced to a contaminated well in London in 1854 by John Snow, and epidemics, which can occur with extreme rapidity, are often associated with conditions of poor sanitation. The disease has a high lethality if left untreated, and millions have died over the centuries. There have been seven major pandemics between 1817 and today. Six were attributed to the classical biotype, while the 7th, which started in 1961, is associated with the El Tor biotype.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_005140:960261:975994975994976362369Vibrio vulnificus YJ016 chromosome II, complete sequencehypothetical protein3e-30130
NC_010634:3155741:316264731626473163060414Yersinia pseudotuberculosis PB1/+, complete genomehypothetical protein7e-0855.8
NC_006155:3237990:324489632448963245309414Yersinia pseudotuberculosis IP 32953, complete genomehypothetical protein5e-0753.1
NC_009708:1497898:150985615098561510269414Yersinia pseudotuberculosis IP 31758 chromosome, complete genomeOB-fold nucleic acid binding domain-containing protein6e-0753.1
NC_008800:1300500:132331813233181323731414Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,hypothetical protein1e-0651.6