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Query: NC_016944:975725:997732 Vibrio cholerae IEC224 chromosome I, complete sequence

Start: 997732, End: 998928, Length: 1197

Host Lineage: Vibrio cholerae; Vibrio; Vibrionaceae; Vibrionales; Proteobacteria; Bacteria

General Information: It was isolated in November of 1994 at the city of Belém/Pa from a stool sample. This genus is abundant in marine or freshwater environments such as estuaries, brackish ponds, or coastal areas; regions that provide an important reservoir for the organism in between outbreaks of the disease. Vibrio can affect shellfish, finfish, and other marine animals and a number of species are pathogenic for humans. Vibrio cholerae can colonize the mucosal surface of the small intestines of humans where it will cause cholera, a severe and sudden onset diarrheal disease. One famous outbreak was traced to a contaminated well in London in 1854 by John Snow, and epidemics, which can occur with extreme rapidity, are often associated with conditions of poor sanitation. The disease has a high lethality if left untreated, and millions have died over the centuries. There have been seven major pandemics between 1817 and today. Six were attributed to the classical biotype, while the 7th, which started in 1961, is associated with the El Tor biotype.

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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009457:471337:4914494914494926451197Vibrio cholerae O395 chromosome 2, complete sequencehypothetical protein0781
NC_017270:885179:9036819036819048771197Vibrio cholerae LMA3984-4 chromosome chromosome I, completeCapsular polysaccharide synthesis enzyme CpsB0773
NC_005140:444353:4625374625374638891353Vibrio vulnificus YJ016 chromosome II, complete sequencehypothetical protein2e-33143
NC_004460:1718088:1737236173723617384561221Vibrio vulnificus CMCP6 chromosome II, complete sequencehypothetical protein3e-33142
NC_012108:2874831:2915389291538929167021314Desulfobacterium autotrophicum HRM2, complete genomehypothetical protein9e-1478.6
NC_012912:4012112:4036389403638940376751287Dickeya zeae Ech1591, complete genomeputative capsular polysaccharide biosynthesis protein2e-1273.9
NC_014500:564864:5691635691635704491287Dickeya dadantii 3937 chromosome, complete genomecapsular polysaccharide synthesis protein CpsB6e-1272.4