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Query: NC_016944:975725:993677 Vibrio cholerae IEC224 chromosome I, complete sequence

Start: 993677, End: 994993, Length: 1317

Host Lineage: Vibrio cholerae; Vibrio; Vibrionaceae; Vibrionales; Proteobacteria; Bacteria

General Information: It was isolated in November of 1994 at the city of Belém/Pa from a stool sample. This genus is abundant in marine or freshwater environments such as estuaries, brackish ponds, or coastal areas; regions that provide an important reservoir for the organism in between outbreaks of the disease. Vibrio can affect shellfish, finfish, and other marine animals and a number of species are pathogenic for humans. Vibrio cholerae can colonize the mucosal surface of the small intestines of humans where it will cause cholera, a severe and sudden onset diarrheal disease. One famous outbreak was traced to a contaminated well in London in 1854 by John Snow, and epidemics, which can occur with extreme rapidity, are often associated with conditions of poor sanitation. The disease has a high lethality if left untreated, and millions have died over the centuries. There have been seven major pandemics between 1817 and today. Six were attributed to the classical biotype, while the 7th, which started in 1961, is associated with the El Tor biotype.

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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012582:997268:1018813101881310201291317Vibrio cholerae O395 chromosome chromosome I, complete sequencehypothetical protein0784
NC_012578:936000:9540719540719553871317Vibrio cholerae M66-2 chromosome I, complete sequencehypothetical protein0784
NC_009457:471337:4873944873944887101317Vibrio cholerae O395 chromosome 2, complete sequencehypothetical protein0784
NC_002505:980595:9966569966569979721317Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, completehypothetical protein0784
NC_017270:885179:9003039003039016191317Vibrio cholerae LMA3984-4 chromosome chromosome I, completeRbmD, Lipid A core antigen ligase0752
NC_015633:2327500:2329947232994723312631317Vibrio anguillarum 775 chromosome chromosome I, complete sequencehypothetical protein8e-157553
NC_018678:1745944:1745944174594417473531410Alteromonas macleodii str. 'English Channel 673' chromosome,O-antigen polymerase3e-69263
NC_011138:2668479:2686826268682626882381413Alteromonas macleodii 'Deep ecotype', complete genomeO-antigen polymerase7e-66251
NC_017328:3625000:3644096364409636453701275Shigella flexneri 2002017 chromosome, complete genomehypothetical protein2e-1170.5
NC_008258:3550500:3569806356980635710801275Shigella flexneri 5 str. 8401, complete genomehypothetical protein2e-1170.5
NC_011768:1718869:1767696176769617690751380Desulfatibacillum alkenivorans AK-01, complete genomeO-antigen polymerase1e-1068.2
NC_017082:5844708:5857731585773158591161386Bradyrhizobium sp. S23321, complete genomehypothetical protein8e-1065.5
NC_014377:480158:4865244865244894812958Thermosediminibacter oceani DSM 16646 chromosome, complete genomeO-antigen polymerase7e-0858.9
NC_015690:632565:6405746405746430632490Paenibacillus mucilaginosus KNP414 chromosome, complete genomeO-antigen polymerase1e-0758.2
NC_004741:4160500:4163583416358341646081026Shigella flexneri 2a str. 2457T, complete genomehypothetical protein6e-0755.8
NC_014355:3398033:3421519342151934235161998Candidatus Nitrospira defluvii, complete genomehypothetical protein1e-0654.7
NC_005296:3783348:3801814380181438032471434Rhodopseudomonas palustris CGA009, complete genomeO-antigen polymerase4e-0653.1
NC_011004:4045277:4063752406375240651851434Rhodopseudomonas palustris TIE-1, complete genomeO-antigen polymerase5e-0652.8
NC_008782:3167440:3205648320564832066731026Acidovorax sp. JS42, complete genomeputative binding-protein-dependent transport system protein6e-0652.4
NC_019940:2931500:2951211295121129527251515Thioflavicoccus mobilis 8321 chromosome, complete genomeLipid A core--O-antigen ligase-like protein8e-0652