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Query: NC_016944:975725:980550 Vibrio cholerae IEC224 chromosome I, complete sequence

Start: 980550, End: 981959, Length: 1410

Host Lineage: Vibrio cholerae; Vibrio; Vibrionaceae; Vibrionales; Proteobacteria; Bacteria

General Information: It was isolated in November of 1994 at the city of Belém/Pa from a stool sample. This genus is abundant in marine or freshwater environments such as estuaries, brackish ponds, or coastal areas; regions that provide an important reservoir for the organism in between outbreaks of the disease. Vibrio can affect shellfish, finfish, and other marine animals and a number of species are pathogenic for humans. Vibrio cholerae can colonize the mucosal surface of the small intestines of humans where it will cause cholera, a severe and sudden onset diarrheal disease. One famous outbreak was traced to a contaminated well in London in 1854 by John Snow, and epidemics, which can occur with extreme rapidity, are often associated with conditions of poor sanitation. The disease has a high lethality if left untreated, and millions have died over the centuries. There have been seven major pandemics between 1817 and today. Six were attributed to the classical biotype, while the 7th, which started in 1961, is associated with the El Tor biotype.

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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016445:452100:4605224605224619311410Vibrio cholerae O1 str. 2010EL-1786 chromosome 1, completehypothetical protein0769
NC_012578:936000:9409449409449423531410Vibrio cholerae M66-2 chromosome I, complete sequenceputative polysaccharide export protein0769
NC_002505:980595:9835299835299849381410Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, completepolysaccharide export protein, putative0769
NC_009457:471337:4745944745944756761083Vibrio cholerae O395 chromosome 2, complete sequencepolysaccharide export protein2e-180632
NC_017270:885179:890764890764891366603Vibrio cholerae LMA3984-4 chromosome chromosome I, completepolysaccharide export protein, putative2e-85316
NC_009457:471337:474271474271474579309Vibrio cholerae O395 chromosome 2, complete sequencepolysaccharide export protein7e-28125
NC_014206:3468500:3480810348081034822671458Geobacillus sp. C56-T3 chromosome, complete genomepolysaccharide biosynthesis protein4e-1789.7
NC_007498:1774859:1787505178750517889321428Pelobacter carbinolicus DSM 2380, complete genomepolysaccharide biosynthesis protein5e-1376.3
NC_018870:271323:2768252768252782611437Thermacetogenium phaeum DSM 12270 chromosome, complete genomepolysaccharide biosynthesis protein1e-0965.1
NC_011770:2046490:2059510205951020609341425Pseudomonas aeruginosa LESB58, complete genomehypothetical protein3e-0860.1
NC_006177:2883476:2897656289765628991401485Symbiobacterium thermophilum IAM 14863, complete genomepolysaccharide biosynthesis protein6e-0756.2
NC_010581:2999002:3020464302046430219061443Beijerinckia indica subsp. indica ATCC 9039, complete genomepolysaccharide biosynthesis protein5e-0653.1
NC_020209:997385:101063210106321011525894Pseudomonas poae RE*1-1-14, complete genomehypothetical protein8e-0652