Pre_GI: BLASTP Hits

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Query: NC_016944:859492:868302 Vibrio cholerae IEC224 chromosome I, complete sequence

Start: 868302, End: 869663, Length: 1362

Host Lineage: Vibrio cholerae; Vibrio; Vibrionaceae; Vibrionales; Proteobacteria; Bacteria

General Information: It was isolated in November of 1994 at the city of Belém/Pa from a stool sample. This genus is abundant in marine or freshwater environments such as estuaries, brackish ponds, or coastal areas; regions that provide an important reservoir for the organism in between outbreaks of the disease. Vibrio can affect shellfish, finfish, and other marine animals and a number of species are pathogenic for humans. Vibrio cholerae can colonize the mucosal surface of the small intestines of humans where it will cause cholera, a severe and sudden onset diarrheal disease. One famous outbreak was traced to a contaminated well in London in 1854 by John Snow, and epidemics, which can occur with extreme rapidity, are often associated with conditions of poor sanitation. The disease has a high lethality if left untreated, and millions have died over the centuries. There have been seven major pandemics between 1817 and today. Six were attributed to the classical biotype, while the 7th, which started in 1961, is associated with the El Tor biotype.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012582:882931:8934258934258947951371Vibrio cholerae O395 chromosome chromosome I, complete sequencehypothetical protein0902
NC_012578:818241:8287358287358301051371Vibrio cholerae M66-2 chromosome I, complete sequencehypothetical protein0902
NC_009457:351512:3620063620063633761371Vibrio cholerae O395 chromosome 2, complete sequencehypothetical protein0902
NC_002505:860789:8712838712838726531371Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, completehypothetical protein0902
NC_012668:2744393:2791154279115427925211368Vibrio cholerae MJ-1236 chromosome 1, complete sequencehypothetical protein0902
NC_016445:338288:3487823487823501431362Vibrio cholerae O1 str. 2010EL-1786 chromosome 1, completehypothetical protein0902
NC_005139:796546:8022448022448036141371Vibrio vulnificus YJ016 chromosome I, complete sequencehypothetical protein0865
NC_004459:349500:3919093919093932701362Vibrio vulnificus CMCP6 chromosome I, complete sequencehypothetical protein0865
NC_016816:1676460:1706579170657917078951317Pantoea ananatis LMG 5342, complete genomeHipA domain-containing protein5e-118424
NC_009053:1895485:1905515190551519068461332Actinobacillus pleuropneumoniae L20, complete genomehypothetical protein2e-114412
NC_004347:3303957:3305737330573733071041368Shewanella oneidensis MR-1, complete genomehypothetical protein9e-99360
NC_013956:2749685:2751180275118027524961317Pantoea ananatis LMG 20103 chromosome, complete genomehypothetical protein8e-97354
NC_012560:3200961:3213431321343132147411311Azotobacter vinelandii DJ, complete genomehypothetical protein3e-56219
NC_021150:3200959:3213429321342932147391311Azotobacter vinelandii CA6, complete genomehypothetical protein3e-56219
NC_020829:1:3395933959352721314Pseudomonas denitrificans ATCC 13867, complete genomehipa-like c-terminal domain protein8e-48191