Pre_GI: BLASTP Hits

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Query: NC_016944:1621575:1638629 Vibrio cholerae IEC224 chromosome I, complete sequence

Start: 1638629, End: 1639060, Length: 432

Host Lineage: Vibrio cholerae; Vibrio; Vibrionaceae; Vibrionales; Proteobacteria; Bacteria

General Information: It was isolated in November of 1994 at the city of Belém/Pa from a stool sample. This genus is abundant in marine or freshwater environments such as estuaries, brackish ponds, or coastal areas; regions that provide an important reservoir for the organism in between outbreaks of the disease. Vibrio can affect shellfish, finfish, and other marine animals and a number of species are pathogenic for humans. Vibrio cholerae can colonize the mucosal surface of the small intestines of humans where it will cause cholera, a severe and sudden onset diarrheal disease. One famous outbreak was traced to a contaminated well in London in 1854 by John Snow, and epidemics, which can occur with extreme rapidity, are often associated with conditions of poor sanitation. The disease has a high lethality if left untreated, and millions have died over the centuries. There have been seven major pandemics between 1817 and today. Six were attributed to the classical biotype, while the 7th, which started in 1961, is associated with the El Tor biotype.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_020211:2094500:209893420989342099359426Serratia marcescens WW4, complete genometellurite resistance protein TerB3e-1373.9
NC_020181:5217000:522949352294935229918426Enterobacter aerogenes EA1509E, complete genomeFIG00638630: hypothetical protein8e-1372.4
NC_015566:3659318:366330136633013663726426Serratia sp. AS12 chromosome, complete genomehypothetical protein1e-1272
NC_011294:1465500:147996814799681480363396Salmonella enterica subsp. enterica serovar Enteritidis strbacteriophage protein7e-1165.9
NC_002655:2142587:214574321457432146237495Escherichia coli O157:H7 EDL933, complete genomeunknown protein encoded within prophage CP-933R1e-0858.2
NC_002695:1929215:194099019409901941421432Escherichia coli O157:H7 str. Sakai, complete genomehypothetical protein2e-0858.2
NC_016838:85487:101817101817102188372Klebsiella pneumoniae subsp. pneumoniae HS11286 plasmid pKPHS1,TciA4e-0650.4