Some Help

Query: NC_016944:1547176:1566728 Vibrio cholerae IEC224 chromosome I, complete sequence

Start: 1566728, End: 1567915, Length: 1188

Host Lineage: Vibrio cholerae; Vibrio; Vibrionaceae; Vibrionales; Proteobacteria; Bacteria

General Information: It was isolated in November of 1994 at the city of Belém/Pa from a stool sample. This genus is abundant in marine or freshwater environments such as estuaries, brackish ponds, or coastal areas; regions that provide an important reservoir for the organism in between outbreaks of the disease. Vibrio can affect shellfish, finfish, and other marine animals and a number of species are pathogenic for humans. Vibrio cholerae can colonize the mucosal surface of the small intestines of humans where it will cause cholera, a severe and sudden onset diarrheal disease. One famous outbreak was traced to a contaminated well in London in 1854 by John Snow, and epidemics, which can occur with extreme rapidity, are often associated with conditions of poor sanitation. The disease has a high lethality if left untreated, and millions have died over the centuries. There have been seven major pandemics between 1817 and today. Six were attributed to the classical biotype, while the 7th, which started in 1961, is associated with the El Tor biotype.

Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia

SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012667:839318:8549658549658561521188Vibrio cholerae MJ-1236 chromosome 2, complete genomehypothetical protein0676
NC_016445:1027143:1043977104397710452601284Vibrio cholerae O1 str. 2010EL-1786 chromosome 1, completehypothetical protein0673
NC_002505:1550108:1569699156969915709821284Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, completehypothetical protein0673
NC_009456:557962:5634835634835647661284Vibrio cholerae O395 chromosome 1, complete sequencehypothetical protein5e-180630
NC_012583:683887:699176699176699919744Vibrio cholerae O395 chromosome chromosome II, complete sequenceorfU7e-107387