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Query: NC_016944:1547176:1566438 Vibrio cholerae IEC224 chromosome I, complete sequence

Start: 1566438, End: 1566722, Length: 285

Host Lineage: Vibrio cholerae; Vibrio; Vibrionaceae; Vibrionales; Proteobacteria; Bacteria

General Information: It was isolated in November of 1994 at the city of Belém/Pa from a stool sample. This genus is abundant in marine or freshwater environments such as estuaries, brackish ponds, or coastal areas; regions that provide an important reservoir for the organism in between outbreaks of the disease. Vibrio can affect shellfish, finfish, and other marine animals and a number of species are pathogenic for humans. Vibrio cholerae can colonize the mucosal surface of the small intestines of humans where it will cause cholera, a severe and sudden onset diarrheal disease. One famous outbreak was traced to a contaminated well in London in 1854 by John Snow, and epidemics, which can occur with extreme rapidity, are often associated with conditions of poor sanitation. The disease has a high lethality if left untreated, and millions have died over the centuries. There have been seven major pandemics between 1817 and today. Six were attributed to the classical biotype, while the 7th, which started in 1961, is associated with the El Tor biotype.

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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016445:1027143:104368710436871043980294Vibrio cholerae O1 str. 2010EL-1786 chromosome 1, completeaccessory cholera enterotoxin3e-47186
NC_002505:1550108:156940915694091569702294Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, completeaccessory cholera enterotoxin3e-47186
NC_012667:839318:854675854675854965291Vibrio cholerae MJ-1236 chromosome 2, complete genomeaccessory cholera enterotoxin3e-47186
NC_009456:557962:564763564763565056294Vibrio cholerae O395 chromosome 1, complete sequenceaccessory enterotoxin1e-45181
NC_012583:683887:698886698886699176291Vibrio cholerae O395 chromosome chromosome II, complete sequenceaccessory cholera enterotoxin1e-45181