Some Help

Query: NC_016944:1547176:1565242 Vibrio cholerae IEC224 chromosome I, complete sequence

Start: 1565242, End: 1566441, Length: 1200

Host Lineage: Vibrio cholerae; Vibrio; Vibrionaceae; Vibrionales; Proteobacteria; Bacteria

General Information: It was isolated in November of 1994 at the city of Belém/Pa from a stool sample. This genus is abundant in marine or freshwater environments such as estuaries, brackish ponds, or coastal areas; regions that provide an important reservoir for the organism in between outbreaks of the disease. Vibrio can affect shellfish, finfish, and other marine animals and a number of species are pathogenic for humans. Vibrio cholerae can colonize the mucosal surface of the small intestines of humans where it will cause cholera, a severe and sudden onset diarrheal disease. One famous outbreak was traced to a contaminated well in London in 1854 by John Snow, and epidemics, which can occur with extreme rapidity, are often associated with conditions of poor sanitation. The disease has a high lethality if left untreated, and millions have died over the centuries. There have been seven major pandemics between 1817 and today. Six were attributed to the classical biotype, while the 7th, which started in 1961, is associated with the El Tor biotype.

Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia

SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016445:1027143:1042491104249110436901200Vibrio cholerae O1 str. 2010EL-1786 chromosome 1, completezona occludens toxin0831
NC_012667:839318:8534798534798546781200Vibrio cholerae MJ-1236 chromosome 2, complete genomezona occludens toxin0831
NC_002505:1550108:1568213156821315694121200Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, completezona occludens toxin0831
NC_012583:683887:6976906976906988891200Vibrio cholerae O395 chromosome chromosome II, complete sequencezona occludens toxin0825
NC_009456:557962:5650535650535662521200Vibrio cholerae O395 chromosome 1, complete sequencezona occludens toxin0825
NC_005773:3220500:3225970322597032272861317Pseudomonas syringae pv. phaseolicola 1448A, complete genomezona occludens toxin, putative3e-37156
NC_011770:4542183:4547817454781745490791263Pseudomonas aeruginosa LESB58, complete genomehypothetical protein of bacteriophage Pf11e-36154
NC_002516:776787:7929977929977942711275Pseudomonas aeruginosa PAO1, complete genomehypothetical protein of bacteriophage Pf14e-34145
NC_008463:4342119:4347730434773043490131284Pseudomonas aeruginosa UCBPP-PA14, complete genomehypothetical protein6e-34145
NC_009656:5505413:5531861553186155331351275Pseudomonas aeruginosa PA7 chromosome, complete genomehypothetical protein6e-34145
NC_015572:2541968:2548099254809925494451347Methylomonas methanica MC09 chromosome, complete genomeZonular occludens toxin8e-34144
NC_009052:2512373:2541106254110625424731368Shewanella baltica OS155, complete genomeZonular occludens toxin8e-23108
NC_013457:140474:1558921558921572771386Vibrio sp. Ex25 chromosome 2, complete genomezona occludens toxin2e-20100
NC_014966:919442:9236479236479250141368Vibrio vulnificus MO6-24/O chromosome II, complete sequencezona occludens toxin7e-1995.1
NC_009783:2306953:2311042231104223123101269Vibrio harveyi ATCC BAA-1116 chromosome I, complete sequencehypothetical protein5e-1169.3
NC_013446:2623528:2637409263740926387191311Comamonas testosteroni CNB-2, complete genomeZonular occludens toxin7e-1065.5
NC_017506:3248724:3251087325108732522501164Marinobacter adhaerens HP15 chromosome, complete genomephage-related membrane protein3e-0963.5
NC_012724:359444:3725843725843737021119Burkholderia glumae BGR1 chromosome 1, complete genomePutative phage-related membrane protein2e-0757
NC_006350:3957454:397103439710343971939906Burkholderia pseudomallei K96243 chromosome 1, complete sequenceputative bacteriophage protein5e-0755.8
NC_017168:3192817:3201622320162232026471026Yersinia pestis A1122 chromosome, complete genomeputative phage-related membrane protein6e-0755.5
NC_009074:3791232:380872138087213809647927Burkholderia pseudomallei 668 chromosome I, complete sequenceZonula occludens toxin1e-0655.1
NC_007946:1632025:1655130165513016561551026Escherichia coli UTI89, complete genomeputative phage-related membrane protein2e-0653.9