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Query: NC_016944:1547176:1564367 Vibrio cholerae IEC224 chromosome I, complete sequence

Start: 1564367, End: 1565143, Length: 777

Host Lineage: Vibrio cholerae; Vibrio; Vibrionaceae; Vibrionales; Proteobacteria; Bacteria

General Information: It was isolated in November of 1994 at the city of Belém/Pa from a stool sample. This genus is abundant in marine or freshwater environments such as estuaries, brackish ponds, or coastal areas; regions that provide an important reservoir for the organism in between outbreaks of the disease. Vibrio can affect shellfish, finfish, and other marine animals and a number of species are pathogenic for humans. Vibrio cholerae can colonize the mucosal surface of the small intestines of humans where it will cause cholera, a severe and sudden onset diarrheal disease. One famous outbreak was traced to a contaminated well in London in 1854 by John Snow, and epidemics, which can occur with extreme rapidity, are often associated with conditions of poor sanitation. The disease has a high lethality if left untreated, and millions have died over the centuries. There have been seven major pandemics between 1817 and today. Six were attributed to the classical biotype, while the 7th, which started in 1961, is associated with the El Tor biotype.

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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016445:1027143:104160910416091042466858Vibrio cholerae O1 str. 2010EL-1786 chromosome 1, completecholera enterotoxin, A subunit2e-144511
NC_012667:839318:852604852604853380777Vibrio cholerae MJ-1236 chromosome 2, complete genomeenterotoxin A subunit (NAD(+)--diphthamide ADP- ribosyltransferase)7e-144509
NC_012583:683887:696794696794697570777Vibrio cholerae O395 chromosome chromosome II, complete sequencecholera enterotoxin, A subunit7e-144509
NC_009456:557962:566372566372567148777Vibrio cholerae O395 chromosome 1, complete sequencecholera enterotoxin, A subunit7e-144509
NC_002505:1550108:156733815673381568114777Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, completecholera enterotoxin, A subunit7e-144509
NC_007952:1416000:1416720141672014182491530Burkholderia xenovorans LB400 chromosome 2, complete sequencehypothetical protein4e-0755.1