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Query: NC_016944:1547176:1561499 Vibrio cholerae IEC224 chromosome I, complete sequence

Start: 1561499, End: 1561873, Length: 375

Host Lineage: Vibrio cholerae; Vibrio; Vibrionaceae; Vibrionales; Proteobacteria; Bacteria

General Information: It was isolated in November of 1994 at the city of Belém/Pa from a stool sample. This genus is abundant in marine or freshwater environments such as estuaries, brackish ponds, or coastal areas; regions that provide an important reservoir for the organism in between outbreaks of the disease. Vibrio can affect shellfish, finfish, and other marine animals and a number of species are pathogenic for humans. Vibrio cholerae can colonize the mucosal surface of the small intestines of humans where it will cause cholera, a severe and sudden onset diarrheal disease. One famous outbreak was traced to a contaminated well in London in 1854 by John Snow, and epidemics, which can occur with extreme rapidity, are often associated with conditions of poor sanitation. The disease has a high lethality if left untreated, and millions have died over the centuries. There have been seven major pandemics between 1817 and today. Six were attributed to the classical biotype, while the 7th, which started in 1961, is associated with the El Tor biotype.

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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_002505:1550108:156447015644701564844375Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, completeRstB1 protein1e-68257
NC_016944:1547176:156840615684061568786381Vibrio cholerae IEC224 chromosome I, complete sequenceRstB2 protein4e-67252
NC_009456:557962:562708562708563088381Vibrio cholerae O395 chromosome 1, complete sequenceRstB2 protein4e-67252
NC_012583:683887:700854700854701231378Vibrio cholerae O395 chromosome chromosome II, complete sequenceRstB2 protein1e-66251
NC_002505:1550108:157137715713771571760384Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, completeRstB2 protein8e-66248
NC_012667:839318:856643856643857023381Vibrio cholerae MJ-1236 chromosome 2, complete genomeRstB phage-related integrase2e-65246
NC_016445:1027143:104838610483861048736351Vibrio cholerae O1 str. 2010EL-1786 chromosome 1, completeRstB1 protein1e-63241
NC_016445:1027143:104565510456551046011357Vibrio cholerae O1 str. 2010EL-1786 chromosome 1, completeRstB phage-related integrase3e-62236
NC_009052:2512373:253043425304342530817384Shewanella baltica OS155, complete genomehypothetical protein9e-0648.9