Pre_GI: BLASTP Hits

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Query: NC_016914:231324:234204 Rickettsia rickettsii str. Hino chromosome, complete genome

Start: 234204, End: 234392, Length: 189

Host Lineage: Rickettsia rickettsii; Rickettsia; Rickettsiaceae; Rickettsiales; Proteobacteria; Bacteria

General Information: This genus, like other Rickettsial organisms such as Neorickettsia and Anaplasma, are obligate intracellular pathogens and is composed of two groups, the spotted fever group, and the typhus group. The latter is composed of two organisms, Rickettsia prowazekii and Rickettsia typhi. The bacteria are transmitted via an insect, usually a tick, to a host organism, in this case humans, where they target endothelial cells and sometimes macrophages. They attach via an adhesin, rickettsial outer membrane protein A, and are internalized where they persist as cytoplasmically free organisms. This organism was first identified by Dr. Howard Rickets as the causative agent of Rocky Mountain Spotted Fever, which was originally named for its geographic distribution at the time, it is now known to be widespread throughout the North American continent. This bacterium is an obligate intracellular pathogen that infects primarily the vascular endothelium, and occasionally smooth muscle tissue. This bacterium is an obligate intracellular pathogen that infects primarily the vascular endothelium, and occasionally smooth muscle tissue. It is passed to the human host from a tick bite, and the tick acts as both a natural reservoir and a vector for disease transmission. Once the organism is endocytosed by the host cell, it quickly escapes the phagozome, and replicates intracellularly, causing cell death and tissue damage. The disease is characterized by a spotted rash and has a high mortality rate if left untreated.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016909:230000:233977233977234165189Rickettsia rickettsii str. Arizona chromosome, complete genomehypothetical protein1e-28125
NC_010263:232482:234117234117234305189Rickettsia rickettsii str. Iowa, complete genomehypothetical protein1e-28125
NC_003103:225956:230244230244230432189Rickettsia conorii str. Malish 7, complete genomehypothetical protein3e-28123
NC_016913:917500:934812934812934997186Rickettsia rickettsii str. Brazil chromosome, complete genomehypothetical protein3e-28123
NC_016911:232481:234065234065234250186Rickettsia rickettsii str. Hauke chromosome, complete genomehypothetical protein3e-28123
NC_009882:232400:234023234023234208186Rickettsia rickettsii str. 'Sheila Smith', complete genomehypothetical protein3e-28123
NC_016930:228000:232054232054232239186Rickettsia philipii str. 364D chromosome, complete genomehypothetical protein1e-27121
NC_015866:233448:236302236302236487186Rickettsia heilongjiangensis 054 chromosome, complete genomehypothetical protein1e-27121
NC_016050:236000:237247237247237435189Rickettsia japonica YH, complete genomehypothetical protein1e-26118