Pre_GI: BLASTN Hits

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Query: NC_016913:917500 Rickettsia rickettsii str. Brazil chromosome, complete genome

Start: 917500, End: 937873, Length: 20374

Host Lineage: Rickettsia rickettsii; Rickettsia; Rickettsiaceae; Rickettsiales; Proteobacteria; Bacteria

General Information: This genus, like other Rickettsial organisms such as Neorickettsia and Anaplasma, are obligate intracellular pathogens and is composed of two groups, the spotted fever group, and the typhus group. The latter is composed of two organisms, Rickettsia prowazekii and Rickettsia typhi. The bacteria are transmitted via an insect, usually a tick, to a host organism, in this case humans, where they target endothelial cells and sometimes macrophages. They attach via an adhesin, rickettsial outer membrane protein A, and are internalized where they persist as cytoplasmically free organisms. This organism was first identified by Dr. Howard Rickets as the causative agent of Rocky Mountain Spotted Fever, which was originally named for its geographic distribution at the time, it is now known to be widespread throughout the North American continent. This bacterium is an obligate intracellular pathogen that infects primarily the vascular endothelium, and occasionally smooth muscle tissue. This bacterium is an obligate intracellular pathogen that infects primarily the vascular endothelium, and occasionally smooth muscle tissue. It is passed to the human host from a tick bite, and the tick acts as both a natural reservoir and a vector for disease transmission. Once the organism is endocytosed by the host cell, it quickly escapes the phagozome, and replicates intracellularly, causing cell death and tissue damage. The disease is characterized by a spotted rash and has a high mortality rate if left untreated.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_010611:31976*319765159919624Acinetobacter baumannii ACICU, complete genome7e-1383.8BLASTN svgBLASTP svg
NC_003909:4064904*4064904408337118468Bacillus cereus ATCC 10987, complete genome2e-0661.9BLASTN svgBLASTP svg
NC_012225:236490*23649025991523426Brachyspira hyodysenteriae WA1, complete genome2e-0971.9BLASTN svgBLASTP svg
NC_015662:110950*11095013012219173Buchnera aphidicola (Cinara tujafilina) chromosome, complete1e-1179.8BLASTN svgBLASTP svg
NC_002528:148274*14827417635828085Buchnera aphidicola str. APS (Acyrthosiphon pisum), complete6e-0763.9BLASTN svgBLASTP svg
NC_018507:339000*33900036299924000Candidatus Portiera aleyrodidarum BT-B chromosome, complete genome6e-0763.9BLASTN svgBLASTP svg
NC_018677:329829*32982935599926171Candidatus Portiera aleyrodidarum BT-B-HRs chromosome, complete6e-0763.9BLASTN svgBLASTP svg
NC_012108:442493*44249346990827416Desulfobacterium autotrophicum HRM2, complete genome2e-0661.9BLASTN svgBLASTP svg
NC_011999:1320159*1320159133954619388Macrococcus caseolyticus JCSC5402, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_010628:67544567544570106925625Nostoc punctiforme PCC 73102, complete genome2e-0661.9BLASTN svgBLASTP svg
NC_006370:768745*76874579247423730Photobacterium profundum SS9 chromosome 1, complete sequence2e-0661.9BLASTN svgBLASTP svg
NC_012633:1145500*1145500116442718928Rickettsia africae ESF-5, complete genome3e-1281.8BLASTN svgBLASTP svg
NC_012633:98000*9800012009922100Rickettsia africae ESF-5, complete genome2e-0661.9BLASTN svgBLASTP svg
NC_012633:928500*92850094893620437Rickettsia africae ESF-5, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_012633:169444*16944418849519052Rickettsia africae ESF-5, complete genome2e-0661.9BLASTN svgBLASTP svg
NC_012633:276500*27650029409917600Rickettsia africae ESF-5, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_012633:12000*120003409922100Rickettsia africae ESF-5, complete genome6e-1073.8BLASTN svgBLASTP svg
NC_009881:562000*56200058446322464Rickettsia akari str. Hartford, complete genome7e-1383.8BLASTN svgBLASTP svg
NC_009881:23650023650025585219353Rickettsia akari str. Hartford, complete genome05309BLASTN svgBLASTP svg
NC_009881:92929*9292911990326975Rickettsia akari str. Hartford, complete genome2e-0661.9BLASTN svgBLASTP svg
NC_009881:166500*16650019436227863Rickettsia akari str. Hartford, complete genome7e-1693.7BLASTN svgBLASTP svg
NC_009881:283500*28350030114817649Rickettsia akari str. Hartford, complete genome3e-1591.7BLASTN svgBLASTP svg
NC_009883:34306734306736795424888Rickettsia bellii OSU 85-389, complete genome01665BLASTN svgBLASTP svg
NC_009883:1262000*1262000128409922100Rickettsia bellii OSU 85-389, complete genome9e-0660BLASTN svgBLASTP svg
NC_009883:1492425*1492425152313430710Rickettsia bellii OSU 85-389, complete genome6e-0763.9BLASTN svgBLASTP svg
NC_007940:266000*26600028816822169Rickettsia bellii RML369-C, complete genome9e-0660BLASTN svgBLASTP svg
NC_007940:1485006*1485006151623031225Rickettsia bellii RML369-C, complete genome6e-0763.9BLASTN svgBLASTP svg
NC_007940:11780001178000120112223123Rickettsia bellii RML369-C, complete genome01657BLASTN svgBLASTP svg
NC_009879:141000*14100016835327354Rickettsia canadensis str. McKiel, complete genome2e-0971.9BLASTN svgBLASTP svg
NC_009879:20041920041921859918181Rickettsia canadensis str. McKiel, complete genome02674BLASTN svgBLASTP svg
NC_009879:260000*26000028209922100Rickettsia canadensis str. McKiel, complete genome6e-1073.8BLASTN svgBLASTP svg
NC_003103:164972*16497218767122700Rickettsia conorii str. Malish 7, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_003103:266013*26601328459918587Rickettsia conorii str. Malish 7, complete genome7e-19103BLASTN svgBLASTP svg
NC_003103:12114*121143207519962Rickettsia conorii str. Malish 7, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_003103:919000*91900093693317934Rickettsia conorii str. Malish 7, complete genome2e-0661.9BLASTN svgBLASTP svg
NC_003103:563961*56396158206318103Rickettsia conorii str. Malish 7, complete genome2e-0661.9BLASTN svgBLASTP svg
NC_003103:22595622595624833922384Rickettsia conorii str. Malish 7, complete genome016510BLASTN svgBLASTP svg
NC_003103:70000*700009245822459Rickettsia conorii str. Malish 7, complete genome2e-25125BLASTN svgBLASTP svg
NC_003103:11338061133806115644922644Rickettsia conorii str. Malish 7, complete genome1e-1489.7BLASTN svgBLASTP svg
NC_007109:80833180833182664718317Rickettsia felis URRWXCal2, complete genome2e-0971.9BLASTN svgBLASTP svg
NC_007109:11052511105251112857523325Rickettsia felis URRWXCal2, complete genome2e-1695.6BLASTN svgBLASTP svg
NC_007109:89400089400091609922100Rickettsia felis URRWXCal2, complete genome2e-1385.7BLASTN svgBLASTP svg
NC_007109:13350371335037135749822462Rickettsia felis URRWXCal2, complete genome3e-27131BLASTN svgBLASTP svg
NC_007109:1206421*1206421123611629696Rickettsia felis URRWXCal2, complete genome1e-23119BLASTN svgBLASTP svg
NC_015866:933500*93350096409930600Rickettsia heilongjiangensis 054 chromosome, complete genome4e-1487.7BLASTN svgBLASTP svg
NC_015866:767790*76779079562627837Rickettsia heilongjiangensis 054 chromosome, complete genome4e-1487.7BLASTN svgBLASTP svg
NC_015866:274550*27455029923324684Rickettsia heilongjiangensis 054 chromosome, complete genome3e-18101BLASTN svgBLASTP svg
NC_015866:173951*17395119294118991Rickettsia heilongjiangensis 054 chromosome, complete genome2e-0661.9BLASTN svgBLASTP svg
NC_015866:14071*140713274218672Rickettsia heilongjiangensis 054 chromosome, complete genome7e-1693.7BLASTN svgBLASTP svg
NC_015866:23344823344825473021283Rickettsia heilongjiangensis 054 chromosome, complete genome019870BLASTN svgBLASTP svg
NC_015866:1144958*1144958116861223655Rickettsia heilongjiangensis 054 chromosome, complete genome7e-1383.8BLASTN svgBLASTP svg
NC_016050:938000*93800095659918600Rickettsia japonica YH, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_016050:771752*77175279719725446Rickettsia japonica YH, complete genome7e-1383.8BLASTN svgBLASTP svg
NC_016050:15224152243358318360Rickettsia japonica YH, complete genome6e-1073.8BLASTN svgBLASTP svg
NC_016050:73993*739939772123729Rickettsia japonica YH, complete genome2e-25125BLASTN svgBLASTP svg
NC_016050:1149000*1149000117209923100Rickettsia japonica YH, complete genome7e-1383.8BLASTN svgBLASTP svg
NC_016050:182218*18221820254820331Rickettsia japonica YH, complete genome6e-0763.9BLASTN svgBLASTP svg
NC_016050:23600023600025587419875Rickettsia japonica YH, complete genome014720BLASTN svgBLASTP svg
NC_009900:23198323198325409922117Rickettsia massiliae MTU5, complete genome012380BLASTN svgBLASTP svg
NC_009900:1011000*1011000103509924100Rickettsia massiliae MTU5, complete genome3e-1281.8BLASTN svgBLASTP svg
NC_009900:73804*738049640022597Rickettsia massiliae MTU5, complete genome2e-1385.7BLASTN svgBLASTP svg
NC_009900:180970*18097020133120362Rickettsia massiliae MTU5, complete genome4e-1177.8BLASTN svgBLASTP svg
NC_009900:12200821220082123809918018Rickettsia massiliae MTU5, complete genome7e-1693.7BLASTN svgBLASTP svg
NC_012730:411526*41152643309921574Rickettsia peacockii str. Rustic, complete genome5e-23117BLASTN svgBLASTP svg
NC_012730:131445*13144515343621992Rickettsia peacockii str. Rustic, complete genome2e-22115BLASTN svgBLASTP svg
NC_012730:293634*29363431769424061Rickettsia peacockii str. Rustic, complete genome4e-1487.7BLASTN svgBLASTP svg
NC_012730:1034115*1034115106009925985Rickettsia peacockii str. Rustic, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_012730:652092*65209267059918508Rickettsia peacockii str. Rustic, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_012730:33250033250035137618877Rickettsia peacockii str. Rustic, complete genome016370BLASTN svgBLASTP svg
NC_000963:20554620554622772522180Rickettsia prowazekii str. Madrid E, complete genome02418BLASTN svgBLASTP svg
NC_009882:915500*91550094186526366Rickettsia rickettsii str. 'Sheila Smith', complete genome2e-0661.9BLASTN svgBLASTP svg
NC_009882:13826*138263610122276Rickettsia rickettsii str. 'Sheila Smith', complete genome4e-0867.9BLASTN svgBLASTP svg
NC_009882:278384*27838429623817855Rickettsia rickettsii str. 'Sheila Smith', complete genome9e-0660BLASTN svgBLASTP svg
NC_009882:563830*56383058653522706Rickettsia rickettsii str. 'Sheila Smith', complete genome2e-0661.9BLASTN svgBLASTP svg
NC_009882:100000*10000012209922100Rickettsia rickettsii str. 'Sheila Smith', complete genome2e-0661.9BLASTN svgBLASTP svg
NC_009882:11237091123709114614722439Rickettsia rickettsii str. 'Sheila Smith', complete genome4e-1487.7BLASTN svgBLASTP svg
NC_009882:23240023240025009917700Rickettsia rickettsii str. 'Sheila Smith', complete genome023260BLASTN svgBLASTP svg
NC_009882:167350*16735019001522666Rickettsia rickettsii str. 'Sheila Smith', complete genome4e-0867.9BLASTN svgBLASTP svg
NC_010263:11359321135932115460218671Rickettsia rickettsii str. Iowa, complete genome4e-1487.7BLASTN svgBLASTP svg
NC_010263:771901*77190179080218902Rickettsia rickettsii str. Iowa, complete genome2e-1695.6BLASTN svgBLASTP svg
NC_010263:23248223248225109918618Rickettsia rickettsii str. Iowa, complete genome023240BLASTN svgBLASTP svg
NC_010263:925500*92550094361318114Rickettsia rickettsii str. Iowa, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_010263:167450*16745019010822659Rickettsia rickettsii str. Iowa, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_010263:563814*56381458651822705Rickettsia rickettsii str. Iowa, complete genome2e-0661.9BLASTN svgBLASTP svg
NC_010263:13826*138263609922274Rickettsia rickettsii str. Iowa, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_010263:278463*27846329631117849Rickettsia rickettsii str. Iowa, complete genome9e-0660BLASTN svgBLASTP svg
NC_010263:100000*10000012209922100Rickettsia rickettsii str. Iowa, complete genome2e-0661.9BLASTN svgBLASTP svg
NC_013517:82510082510084990924810Sebaldella termitidis ATCC 33386, complete genome9e-0660BLASTN svgBLASTP svg
NC_007622:1558753*1558753157743218680Staphylococcus aureus RF122, complete genome9e-0660BLASTN svgBLASTP svg
NC_015760:123929*12392914613122203Streptococcus salivarius CCHSS3, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_012925:27570427570429851422811Streptococcus suis P1/7, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_006449:121462*12146214259721136Streptococcus thermophilus CNRZ1066, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_006448:121435*12143514257121137Streptococcus thermophilus LMG 18311, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_008319:1167213*1167213119083423622Synechococcus sp. CC9311, complete genome6e-0763.9BLASTN svgBLASTP svg
NC_006833:637964*63796465659918636Wolbachia endosymbiont strain TRS of Brugia malayi, complete9e-0660BLASTN svgBLASTP svg