Pre_GI: BLASTN Hits

Some Help

Query: NC_016912:1732354 Staphylococcus aureus subsp. aureus VC40 chromosome, complete

Start: 1732354, End: 1756118, Length: 23765

Host Lineage: Staphylococcus aureus; Staphylococcus; Staphylococcaceae; Bacillales; Firmicutes; Bacteria

General Information: Staphylcocci are generally found inhabiting the skin and mucous membranes of mammals and birds. Some members of this genus can be found as human commensals and these are generally believed to have the greatest pathogenic potential in opportunistic infections. This organism is a major cause of nosocomial (hospital-acquired) and community-acquired infections. S. aureus continues to be a major cause of mortality and is responsible for a variety of infections including, boils, furuncles, styes, impetigo and other superficial skin infections in humans. Also known to cause more serious infections particularly in the chronically ill or immunocompromised. The ability to cause invasive disease is associated with persistance in the nasal cavity of a host.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_007795:1774725*1774725179848923765Staphylococcus aureus subsp. aureus NCTC 8325, complete genome013690BLASTN svgBLASTP svg
NC_002951:1848684*1848684187248723804Staphylococcus aureus subsp. aureus COL, complete genome013680BLASTN svgBLASTP svg
NC_010079:1871915*1871915189554823634Staphylococcus aureus subsp. aureus USA300_TCH1516, complete013670BLASTN svgBLASTP svg
NC_007793:1871165*1871165189479823634Staphylococcus aureus subsp. aureus USA300, complete genome013670BLASTN svgBLASTP svg
NC_002745:1804000*1804000182484520846Staphylococcus aureus subsp. aureus N315, complete genome013480BLASTN svgBLASTP svg
NC_003923:1841500*1841500186443222933Staphylococcus aureus subsp. aureus MW2, complete genome013370BLASTN svgBLASTP svg
NC_002953:1819411*1819411184209922689Staphylococcus aureus subsp. aureus MSSA476, complete genome013370BLASTN svgBLASTP svg
NC_002758:1880323*1880323190322422902Staphylococcus aureus subsp. aureus Mu50, complete genome012990BLASTN svgBLASTP svg
NC_009782:1881722*1881722190409922378Staphylococcus aureus subsp. aureus Mu3, complete genome012990BLASTN svgBLASTP svg
NC_007622:1751500*1751500177342921930Staphylococcus aureus RF122, complete genome012900BLASTN svgBLASTP svg
NC_002952:1917999*1917999194186723869Staphylococcus aureus subsp. aureus MRSA252, complete genome012000BLASTN svgBLASTP svg
NC_004461:1465397*1465397149093125535Staphylococcus epidermidis ATCC 12228, complete genome01078BLASTN svgBLASTP svg
NC_002976:1361364*1361364138809126728Staphylococcus epidermidis RP62A, complete genome01070BLASTN svgBLASTP svg
NC_007168:1167454*1167454119908831635Staphylococcus haemolyticus JCSC1435, complete genome0844BLASTN svgBLASTP svg
NC_020164:1037979*1037979105773719759Staphylococcus warneri SG1, complete genome0724BLASTN svgBLASTP svg
NC_007168:19237231923723194369919977Staphylococcus haemolyticus JCSC1435, complete genome2e-102381BLASTN svgBLASTP svg
NC_007168:19563819563821417518538Staphylococcus haemolyticus JCSC1435, complete genome2e-102381BLASTN svgBLASTP svg
NC_007168:45400045400047628822289Staphylococcus haemolyticus JCSC1435, complete genome2e-102381BLASTN svgBLASTP svg
NC_020164:2219612*2219612224771828107Staphylococcus warneri SG1, complete genome6e-100373BLASTN svgBLASTP svg
NC_007168:24153612415361243618320823Staphylococcus haemolyticus JCSC1435, complete genome6e-100373BLASTN svgBLASTP svg
NC_004461:73390733909894225553Staphylococcus epidermidis ATCC 12228, complete genome6e-100373BLASTN svgBLASTP svg
NC_020164:23293402329340234976120422Staphylococcus warneri SG1, complete genome7e-81309BLASTN svgBLASTP svg
NC_007622:2239799*2239799227094331145Staphylococcus aureus RF122, complete genome2e-53218BLASTN svgBLASTP svg
NC_018704:896209*89620992081324605Amphibacillus xylanus NBRC 15112, complete genome2e-47198BLASTN svgBLASTP svg
NC_007929:473500*47350049963926140Lactobacillus salivarius subsp. salivarius UCC118, complete genome2e-38168BLASTN svgBLASTP svg
NC_012472:4515909*4515909454171025802Bacillus cereus 03BB102, complete genome4e-36161BLASTN svgBLASTP svg
NC_008600:4509793*4509793453559925807Bacillus thuringiensis str. Al Hakam, complete genome1e-33153BLASTN svgBLASTP svg
NC_011772:4638000*4638000466192523926Bacillus cereus G9842, complete genome2e-32149BLASTN svgBLASTP svg
NC_003923:14361391436139147709940961Staphylococcus aureus subsp. aureus MW2, complete genome2e-31145BLASTN svgBLASTP svg
NC_002953:14646931464693150259937907Staphylococcus aureus subsp. aureus MSSA476, complete genome2e-31145BLASTN svgBLASTP svg
NC_006274:4563455*4563455458739323939Bacillus cereus E33L, complete genome1e-30143BLASTN svgBLASTP svg
NC_004461:24576824576826809922332Staphylococcus epidermidis ATCC 12228, complete genome4e-30141BLASTN svgBLASTP svg
NC_005945:4508304*4508304453209923796Bacillus anthracis str. Sterne, complete genome1e-29139BLASTN svgBLASTP svg
NC_007622:16000*160003563419635Staphylococcus aureus RF122, complete genome2e-28135BLASTN svgBLASTP svg
NC_010184:4532262*4532262455888726626Bacillus weihenstephanensis KBAB4, complete genome4e-27131BLASTN svgBLASTP svg
NC_002952:2256000*2256000227809922100Staphylococcus aureus subsp. aureus MRSA252, complete genome4e-27131BLASTN svgBLASTP svg
NC_010079:14653561465356150892843573Staphylococcus aureus subsp. aureus USA300_TCH1516, complete1e-26129BLASTN svgBLASTP svg
NC_007795:13705001370500141025039751Staphylococcus aureus subsp. aureus NCTC 8325, complete genome1e-26129BLASTN svgBLASTP svg
NC_007793:14514091451409149409942691Staphylococcus aureus subsp. aureus USA300, complete genome1e-26129BLASTN svgBLASTP svg
NC_002951:14744651474465151709942635Staphylococcus aureus subsp. aureus COL, complete genome1e-26129BLASTN svgBLASTP svg
NC_005957:4502733*4502733452941126679Bacillus thuringiensis serovar konkukian str. 97-27, complete9e-25123BLASTN svgBLASTP svg
NC_004193:2342528*2342528236730224775Oceanobacillus iheyensis HTE831, complete genome1e-23119BLASTN svgBLASTP svg
NC_002952:25505002550500257443923940Staphylococcus aureus subsp. aureus MRSA252, complete genome5e-23117BLASTN svgBLASTP svg
NC_003909:4484278*4484278451179927522Bacillus cereus ATCC 10987, complete genome5e-23117BLASTN svgBLASTP svg
NC_009782:15103961510396155316542770Staphylococcus aureus subsp. aureus Mu3, complete genome3e-21111BLASTN svgBLASTP svg
NC_002758:15089961508996155209943104Staphylococcus aureus subsp. aureus Mu50, complete genome3e-21111BLASTN svgBLASTP svg
NC_002745:14325851432585147535342769Staphylococcus aureus subsp. aureus N315, complete genome3e-21111BLASTN svgBLASTP svg
NC_007622:23993472399347242439425048Staphylococcus aureus RF122, complete genome1e-1489.7BLASTN svgBLASTP svg
NC_002951:2153571*2153571217716123591Staphylococcus aureus subsp. aureus COL, complete genome8e-1383.8BLASTN svgBLASTP svg
NC_002953:2157781*2157781218009922319Staphylococcus aureus subsp. aureus MSSA476, complete genome8e-1383.8BLASTN svgBLASTP svg
NC_003923:2178000*2178000220034322344Staphylococcus aureus subsp. aureus MW2, complete genome8e-1383.8BLASTN svgBLASTP svg
NC_007793:2217872*2217872224096323092Staphylococcus aureus subsp. aureus USA300, complete genome8e-1383.8BLASTN svgBLASTP svg
NC_007795:2163706*2163706218609922394Staphylococcus aureus subsp. aureus NCTC 8325, complete genome8e-1383.8BLASTN svgBLASTP svg
NC_010079:2217767*2217767224135723591Staphylococcus aureus subsp. aureus USA300_TCH1516, complete8e-1383.8BLASTN svgBLASTP svg
NC_013893:51122251122253420922988Staphylococcus lugdunensis HKU09-01 chromosome, complete genome8e-1383.8BLASTN svgBLASTP svg
NC_004461:20020002002000202415522156Staphylococcus epidermidis ATCC 12228, complete genome3e-1281.8BLASTN svgBLASTP svg
NC_007622:1558753*1558753157743218680Staphylococcus aureus RF122, complete genome5e-1177.8BLASTN svgBLASTP svg
NC_002745:2152000*2152000217427622277Staphylococcus aureus subsp. aureus N315, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_002758:2227874*2227874225013222259Staphylococcus aureus subsp. aureus Mu50, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_009782:2230000*2230000225234622347Staphylococcus aureus subsp. aureus Mu3, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_007622:2117188*2117188213617218985Staphylococcus aureus RF122, complete genome7e-1073.8BLASTN svgBLASTP svg
NC_009922:2766397*2766397278959923203Alkaliphilus oremlandii OhILAs, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_008525:664500*66450068827523776Pediococcus pentosaceus ATCC 25745, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_005362:550823*55082357585325031Lactobacillus johnsonii NCC 533, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_006814:1618588*1618588164662328036Lactobacillus acidophilus NCFM, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_008530:469802*46980249214622345Lactobacillus gasseri ATCC 33323, complete genome3e-0661.9BLASTN svgBLASTP svg