Pre_GI: BLASTP Hits

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Query: NC_016909:926000:928524 Rickettsia rickettsii str. Arizona chromosome, complete genome

Start: 928524, End: 928599, Length: 76

Host Lineage: Rickettsia rickettsii; Rickettsia; Rickettsiaceae; Rickettsiales; Proteobacteria; Bacteria

General Information: This genus, like other Rickettsial organisms such as Neorickettsia and Anaplasma, are obligate intracellular pathogens and is composed of two groups, the spotted fever group, and the typhus group. The latter is composed of two organisms, Rickettsia prowazekii and Rickettsia typhi. The bacteria are transmitted via an insect, usually a tick, to a host organism, in this case humans, where they target endothelial cells and sometimes macrophages. They attach via an adhesin, rickettsial outer membrane protein A, and are internalized where they persist as cytoplasmically free organisms. This organism was first identified by Dr. Howard Rickets as the causative agent of Rocky Mountain Spotted Fever, which was originally named for its geographic distribution at the time, it is now known to be widespread throughout the North American continent. This bacterium is an obligate intracellular pathogen that infects primarily the vascular endothelium, and occasionally smooth muscle tissue. This bacterium is an obligate intracellular pathogen that infects primarily the vascular endothelium, and occasionally smooth muscle tissue. It is passed to the human host from a tick bite, and the tick acts as both a natural reservoir and a vector for disease transmission. Once the organism is endocytosed by the host cell, it quickly escapes the phagozome, and replicates intracellularly, causing cell death and tissue damage. The disease is characterized by a spotted rash and has a high mortality rate if left untreated.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017058:497500:51656451656451663976Rickettsia australis str. Cutlack chromosome, complete genometRNA-Val3e-0650.4
NC_012633:928500:93032493032493039976Rickettsia africae ESF-5, complete genometRNA-Val3e-0650.4
NC_009881:896007:89980189980189987676Rickettsia akari str. Hartford, complete genometRNA-Val3e-0650.4
NC_012730:1034115:10376391037639103771476Rickettsia peacockii str. Rustic, complete genometRNA-Val3e-0650.4
NC_016050:938000:93985093985093992576Rickettsia japonica YH, complete genometRNA-Val3e-0650.4
NC_015866:933500:93659393659393666876Rickettsia heilongjiangensis 054 chromosome, complete genometRNA-Val3e-0650.4
NC_009882:915500:91747091747091754576Rickettsia rickettsii str. 'Sheila Smith', complete genometRNA-Val3e-0650.4
NC_007109:300991:31959231959231966776Rickettsia felis URRWXCal2, complete genometRNA-Val3e-0650.4
NC_009900:1011000:10115871011587101166276Rickettsia massiliae MTU5, complete genometRNA-Val3e-0650.4
NC_010263:925500:92825092825092832576Rickettsia rickettsii str. Iowa, complete genometRNA-Val3e-0650.4
NC_016908:926446:92841592841592849076Rickettsia rickettsii str. Colombia chromosome, complete genometRNA-Val3e-0650.4
NC_016911:926918:92888792888792896276Rickettsia rickettsii str. Hauke chromosome, complete genometRNA-Val3e-0650.4
NC_017044:954318:95598295598295605776Rickettsia parkeri str. Portsmouth chromosome, complete genometRNA-Val3e-0650.4
NC_017043:376441:37824637824637832176Rickettsia montanensis str. OSU 85-930 chromosome, complete genometRNA-Val3e-0650.4
NC_017028:1131896:11327431132743113281876Candidatus Rickettsia amblyommii str. GAT-30V chromosome, completetRNA-Val3e-0650.4
NC_016931:513662:53443153443153450676Rickettsia massiliae str. AZT80 chromosome, complete genometRNA-Val3e-0650.4
NC_016930:943000:94542694542694550176Rickettsia philipii str. 364D chromosome, complete genometRNA-Val3e-0650.4
NC_016915:928000:93007493007493014976Rickettsia rickettsii str. Hlp#2 chromosome, complete genometRNA-Val3e-0650.4
NC_016914:926500:92900592900592908076Rickettsia rickettsii str. Hino chromosome, complete genometRNA-Val3e-0650.4
NC_016913:232500:25199425199425206976Rickettsia rickettsii str. Brazil chromosome, complete genometRNA-Val3e-0650.4
NC_017048:33578:36495364953657076Rickettsia prowazekii str. GvV257 chromosome, complete genometRNA-Val6e-0649.7
NC_017049:801469:80438680438680446176Rickettsia prowazekii str. Chernikova chromosome, complete genometRNA-Val6e-0649.7
NC_017050:804417:80626480626480633976Rickettsia prowazekii str. Katsinyian chromosome, complete genometRNA-Val6e-0649.7
NC_017051:801488:80440580440580448076Rickettsia prowazekii str. Dachau chromosome, complete genometRNA-Val6e-0649.7
NC_017056:804416:80626380626380633876Rickettsia prowazekii str. BuV67-CWPP chromosome, complete genometRNA-Val6e-0649.7
NC_017057:804799:80664680664680672176Rickettsia prowazekii str. RpGvF24 chromosome, complete genometRNA-Val6e-0649.7
NC_017062:812133:81517381517381524876Rickettsia typhi str. B9991CWPP chromosome, complete genometRNA-Val6e-0649.7
NC_017066:811565:81460581460581468076Rickettsia typhi str. TH1527 chromosome, complete genometRNA-Val6e-0649.7
NC_006142:811469:81450981450981458476Rickettsia typhi str. Wilmington, complete genometRNA-Val6e-0649.7