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Query: NC_016908:278457:296455 Rickettsia rickettsii str. Colombia chromosome, complete genome

Start: 296455, End: 297825, Length: 1371

Host Lineage: Rickettsia rickettsii; Rickettsia; Rickettsiaceae; Rickettsiales; Proteobacteria; Bacteria

General Information: This genus, like other Rickettsial organisms such as Neorickettsia and Anaplasma, are obligate intracellular pathogens and is composed of two groups, the spotted fever group, and the typhus group. The latter is composed of two organisms, Rickettsia prowazekii and Rickettsia typhi. The bacteria are transmitted via an insect, usually a tick, to a host organism, in this case humans, where they target endothelial cells and sometimes macrophages. They attach via an adhesin, rickettsial outer membrane protein A, and are internalized where they persist as cytoplasmically free organisms. This organism was first identified by Dr. Howard Rickets as the causative agent of Rocky Mountain Spotted Fever, which was originally named for its geographic distribution at the time, it is now known to be widespread throughout the North American continent. This bacterium is an obligate intracellular pathogen that infects primarily the vascular endothelium, and occasionally smooth muscle tissue. This bacterium is an obligate intracellular pathogen that infects primarily the vascular endothelium, and occasionally smooth muscle tissue. It is passed to the human host from a tick bite, and the tick acts as both a natural reservoir and a vector for disease transmission. Once the organism is endocytosed by the host cell, it quickly escapes the phagozome, and replicates intracellularly, causing cell death and tissue damage. The disease is characterized by a spotted rash and has a high mortality rate if left untreated.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016913:859931:8712728712728726421371Rickettsia rickettsii str. Brazil chromosome, complete genomecyanide-insensitive cytochrome bd-type quinol oxidase subunit I0866
NC_016915:278000:2960992960992974691371Rickettsia rickettsii str. Hlp#2 chromosome, complete genomecyanide-insensitive cytochrome bd-type quinol oxidase subunit I0865
NC_016930:293245:2936692936692950391371Rickettsia philipii str. 364D chromosome, complete genomecyanide-insensitive cytochrome bd-type quinol oxidase subunit I0863
NC_017065:274165:2973442973442987141371Rickettsia slovaca str. D-CWPP chromosome, complete genomeCytochrome d ubiquinol oxidase subunit I0862
NC_016639:274157:2973362973362987061371Rickettsia slovaca 13-B chromosome, complete genomeCytochrome d ubiquinol oxidase subunit I0862
NC_015866:274550:2978632978632992331371Rickettsia heilongjiangensis 054 chromosome, complete genomecyanide-insensitive cytochrome bd-type quinol oxidase subunit I0858
NC_017043:990395:1013515101351510148851371Rickettsia montanensis str. OSU 85-930 chromosome, complete genomecytochrome d ubiquinol oxidase subunit I0855
NC_009879:260000:2789272789272802911365Rickettsia canadensis str. McKiel, complete genomecytochrome d ubiquinol oxidase subunit I0807
NC_009881:283500:2986792986793000341356Rickettsia akari str. Hartford, complete genomeCytochrome d ubiquinol oxidase subunit I0802
NC_017066:262839:2652192652192665621344Rickettsia typhi str. TH1527 chromosome, complete genomecytochrome d ubiquinol oxidase subunit I0780
NC_006142:262825:2652052652052665481344Rickettsia typhi str. Wilmington, complete genomecytochrome d ubiquinol oxidase subunit I0780
NC_012108:1664341:1664341166434116657471407Desulfobacterium autotrophicum HRM2, complete genomeCydA19e-160563
NC_018697:361339:3613393613393627511413Cycloclasticus sp. P1 chromosome, complete genomeBacterial cytochrome ubiquinol oxidase subunit 1 transmembrane protein3e-154545
NC_003198:378844:4003424003424017451404Salmonella enterica subsp. enterica serovar Typhi str. CT18,probable terminal oxidase subunit I4e-134478
NC_015709:1769806:1793644179364417950741431Zymomonas mobilis subsp. pomaceae ATCC 29192 chromosome, completecytochrome bd ubiquinol oxidase subunit I8e-131467
NC_017060:125480:1599231599231613471425Rahnella aquatilis HX2 plasmid PRA1, complete sequencecytochrome bd ubiquinol oxidase subunit I2e-130466
NC_018691:3525430:3579168357916835806161449Alcanivorax dieselolei B5 chromosome, complete genomeCytochrome bd ubiquinol oxidase, subunit I6e-130464
NC_011283:3379181:3379181337918133805871407Klebsiella pneumoniae 342 chromosome, complete genomecyanide-insensitive terminal oxidase CioA1e-129463
NC_007509:3668:3649436494378941401Burkholderia sp. 383 chromosome 3, complete sequenceCytochrome bd ubiquinol oxidase, subunit I2e-128459
NC_010681:121647:1360631360631374511389Burkholderia phytofirmans PsJN chromosome 1, complete sequencecytochrome bd ubiquinol oxidase subunit I3e-128459
NC_008740:1635137:1647417164741716488561440Marinobacter aquaeolei VT8, complete genomecytochrome bd ubiquinol oxidase, subunit I6e-127454
NC_010725:5491491:5498416549841654998401425Methylobacterium populi BJ001, complete genomecytochrome bd ubiquinol oxidase subunit I7e-127454
NC_012660:2045398:2074241207424120756681428Pseudomonas fluorescens SBW25 chromosome, complete genomeputative cytochrome D oxidase subunit I2e-126453
NC_016027:123853:1454141454141468471434Gluconacetobacter xylinus NBRC 3288, complete genomecytochrome bd ubiquinol oxidase subunit I3e-125448
NC_017506:1832443:1844323184432318457651443Marinobacter adhaerens HP15 chromosome, complete genomecytochrome d ubiquinol oxidase subunit I6e-124444
NC_014121:1848971:1870777187077718721771401Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completecytochrome bd ubiquinol oxidase, subunit I6e-123441
NC_013209:2337204:2337204233720423386371434Acetobacter pasteurianus IFO 3283-01, complete genomecytochrome bd ubiquinol oxidase subunit I5e-123441
NC_017100:2339826:2339826233982623412591434Acetobacter pasteurianus IFO 3283-03, complete genomecytochrome bd ubiquinol oxidase subunit I5e-123441
NC_017108:2337163:2337163233716323385961434Acetobacter pasteurianus IFO 3283-12, complete genomecytochrome bd ubiquinol oxidase subunit I5e-123441
NC_017111:2337181:2337181233718123386141434Acetobacter pasteurianus IFO 3283-32, complete genomecytochrome bd ubiquinol oxidase subunit I5e-123441
NC_017121:2337168:2337168233716823386011434Acetobacter pasteurianus IFO 3283-07, complete genomecytochrome bd ubiquinol oxidase subunit I5e-123441
NC_017125:2339806:2339806233980623412391434Acetobacter pasteurianus IFO 3283-22, complete genomecytochrome bd ubiquinol oxidase subunit I5e-123441
NC_017146:2339848:2339848233984823412811434Acetobacter pasteurianus IFO 3283-26, complete genomecytochrome bd ubiquinol oxidase subunit I5e-123441
NC_017150:2244950:2244950224495022463831434Acetobacter pasteurianus IFO 3283-01-42C, complete genomecytochrome bd ubiquinol oxidase subunit I5e-123441
NC_014118:2369669:2381305238130523826931389Burkholderia sp. CCGE1002 chromosome chromosome 2, completecytochrome bd ubiquinol oxidase subunit I1e-121436
NC_008209:761487:7650867650867664981413Roseobacter denitrificans OCh 114, complete genomecytochrome oxidase subunit II, putative3e-120432
NC_012997:334500:3364543364543378181365Teredinibacter turnerae T7901, complete genomebacterial cytochrome ubiquinol oxidase, subunit 1 family protein2e-111402
NC_009925:6097000:6112335611233561137771443Acaryochloris marina MBIC11017, complete genomecytochrome d ubiquinol oxidase subunit I3e-80299
NC_009483:2489000:2520953252095325222961344Geobacter uraniireducens Rf4 chromosome, complete genomecytochrome bd ubiquinol oxidase subunit I4e-76285
NC_014219:567033:5796015796015809591359Bacillus selenitireducens MLS10 chromosome, complete genomecytochrome bd ubiquinol oxidase subunit I1e-72273
NC_013745:104385:1586061586061600301425Haloterrigena turkmenica DSM 5511 plasmid pHTUR02, completecytochrome bd ubiquinol oxidase subunit I7e-71268
NC_014098:2225174:2248460224846022498601401Bacillus tusciae DSM 2912 chromosome, complete genomecytochrome bd ubiquinol oxidase subunit I4e-69262
NC_015850:1614965:1624794162479416262481455Acidithiobacillus caldus SM-1 chromosome, complete genomecytochrome d ubiquinol oxidase subunit I4e-69262
NC_013520:571647:5874465874465888341389Veillonella parvula DSM 2008, complete genomecytochrome bd ubiquinol oxidase subunit I7e-67254
NC_012483:483425:5185065185065198581353Acidobacterium capsulatum ATCC 51196, complete genomecytochrome d ubiquinol oxidase, subunit I2e-64247
NC_019897:3025871:3031145303114530325751431Thermobacillus composti KWC4 chromosome, complete genomecytochrome bd-type quinol oxidase subunit 14e-64246
NC_015589:2480365:2483218248321824846061389Desulfotomaculum ruminis DSM 2154 chromosome, complete genomecytochrome bd ubiquinol oxidase subunit I4e-63242
NC_019897:905185:9247799247799261941416Thermobacillus composti KWC4 chromosome, complete genomecytochrome bd-type quinol oxidase subunit 13e-62239
NC_002506:822401:8239518239518255431593Vibrio cholerae O1 biovar eltor str. N16961 chromosome II, completecytochrome d ubiquinol oxidase, subunit I9e-59228
NC_009456:383819:3995753995754011671593Vibrio cholerae O395 chromosome 1, complete sequencecytochrome d ubiquinol oxidase, subunit I9e-59228
NC_012580:796387:7979377979377995291593Vibrio cholerae M66-2 chromosome II, complete sequencecytochrome d ubiquinol oxidase, subunit I9e-59228
NC_012583:861225:8627758627758643671593Vibrio cholerae O395 chromosome chromosome II, complete sequencecytochrome d ubiquinol oxidase, subunit I9e-59228
NC_012667:504534:5202895202895218811593Vibrio cholerae MJ-1236 chromosome 2, complete genomecytochrome d ubiquinol oxidase subunit I9e-59228
NC_016446:522936:5244955244955260751581Vibrio cholerae O1 str. 2010EL-1786 chromosome 2, completecytochrome bd-I oxidase subunit I9e-59228
NC_016945:822229:8237888237888253681581Vibrio cholerae IEC224 chromosome II, complete sequencecytochrome bd-I oxidase subunit I9e-59228
NC_008010:321561:3231473231473245591413Deinococcus geothermalis DSM 11300 plasmid 1, complete sequencecytochrome bd ubiquinol oxidase, subunit I8e-59228
NC_014831:866614:8875278875278889511425Thermaerobacter marianensis DSM 12885 chromosome, complete genomecytochrome bd quinol oxidase subunit 1 apoprotein3e-57222
NC_014815:4621552:4621552462155246229221371Micromonospora sp. L5 chromosome, complete genomecytochrome bd ubiquinol oxidase subunit i2e-56220
NC_008577:1455000:1455552145555214571081557Shewanella sp. ANA-3 chromosome 1, complete sequencecytochrome bd ubiquinol oxidase, subunit I6e-56218
NC_009092:1504363:1509487150948715110431557Shewanella loihica PV-4, complete genomecytochrome bd ubiquinol oxidase, subunit I1e-54214
NC_010278:315941:3341783341783357281551Actinobacillus pleuropneumoniae serovar 3 str. JL03 chromosome,cytochrome D ubiquinol oxidase, subunit I2e-53210
NC_010162:3275265:3279669327966932810511383Sorangium cellulosum 'So ce 56', complete genomecytochrome d ubiquinol oxidase, subunit I5e-53209
NC_010939:321492:3389923389923405421551Actinobacillus pleuropneumoniae serovar 7 str. AP76, completecytochrome oxidase subunit 14e-53209
NC_021150:1965264:1975535197553519771481614Azotobacter vinelandii CA6, complete genomeCytochrome bd ubiquinol oxidase, subunit I3e-53209
NC_012560:1965251:1975522197552219771351614Azotobacter vinelandii DJ, complete genomeCytochrome bd ubiquinol oxidase, subunit I3e-53209
NC_009053:313779:3293783293783309281551Actinobacillus pleuropneumoniae L20, complete genomecytochrome oxidase subunit 17e-53208
NC_011999:728353:7580257580257593771353Macrococcus caseolyticus JCSC5402, complete genomecytochrome D ubiquinol oxidase subunit I7e-51201
NC_019940:389979:3899793899793915381560Thioflavicoccus mobilis 8321 chromosome, complete genomecytochrome bd-type quinol oxidase subunit 17e-51201
NC_015656:632960:6576046576046590761473Frankia symbiont of Datisca glomerata chromosome, complete genomecytochrome bd ubiquinol oxidase subunit I8e-51201
NC_007778:1053462:1073005107300510745791575Rhodopseudomonas palustris HaA2, complete genomeCytochrome bd ubiquinol oxidase, subunit I1e-50201
NC_016582:6509792:6533045653304565346461602Streptomyces bingchenggensis BCW-1 chromosome, complete genomeputative cytochrome oxidase subunit I3e-50199
NC_016109:4455158:4477042447704244785831542Kitasatospora setae KM-6054, complete genomeputative cytochrome bd-I oxidase subunit I1e-49197
NC_014935:595685:6083826083826099141533Nitratifractor saLSUginis DSM 16511 chromosome, complete genomecytochrome bd quinol oxidase subunit 1 apoprotein2e-49196
NC_014394:2577949:2577949257794925795501602Gallionella capsiferriformans ES-2 chromosome, complete genomecytochrome bd ubiquinol oxidase subunit I3e-49196
NC_014829:259707:2779602779602793151356Bacillus cellulosilyticus DSM 2522 chromosome, complete genomecytochrome bd ubiquinol oxidase subunit I6e-48192
NC_017986:331610:3549963549963565671572Pseudomonas putida ND6 chromosome, complete genomecytochrome d ubiquinol oxidase subunit 12e-47190
NC_013411:2951559:2965701296570129670471347Geobacillus sp. Y412MC61, complete genomecytochrome bd ubiquinol oxidase subunit I7e-47188
NC_014915:2092678:2105632210563221069781347Geobacillus sp. Y412MC52 chromosome, complete genomecytochrome bd ubiquinol oxidase subunit I7e-47188
NC_014206:1497942:1509365150936515107111347Geobacillus sp. C56-T3 chromosome, complete genomecytochrome bd ubiquinol oxidase subunit I7e-47188
NC_006510:2110430:2123897212389721252431347Geobacillus kaustophilus HTA426, complete genomecytochrome bd-type ubiquinol oxidase subunit I2e-46187
NC_003228:2245181:2259223225922322607761554Bacteroides fragilis NCTC 9343, complete genomeputative cytochrome d ubiquinol oxidase subunit I1e-46187
NC_006347:2190000:2202967220296722045201554Bacteroides fragilis YCH46, complete genomecytochrome D ubiquinol oxidase subunit I1e-46187
NC_016776:2237404:2251659225165922532121554Bacteroides fragilis 638R, complete genomeputative cytochrome d ubiquinol oxidase subunit I1e-46187
NC_006510:591339:6291546291546305001347Geobacillus kaustophilus HTA426, complete genomecytochrome bd-type ubiquinol oxidase subunit I3e-46186
NC_006361:1720031:1737823173782317392171395Nocardia farcinica IFM 10152, complete genomeputative cytochrome d ubiquinol oxidase subunit I1e-45184
NC_012918:2569681:2573874257387425751991326Geobacter sp. M21 chromosome, complete genomecytochrome bd ubiquinol oxidase subunit I4e-44179
NC_004663:1499145:1506320150632015078821563Bacteroides thetaiotaomicron VPI-5482, complete genomecytochrome D ubiquinol oxidase subunit I4e-43176
NC_011146:2304475:2320838232083823221631326Geobacter bemidjiensis Bem, complete genomecytochrome bd ubiquinol oxidase subunit I1e-41171
NC_004369:1268956:1308532130853213100491518Corynebacterium efficiens YS-314, complete genomeputative cytochrome D ubiquinol oxidase subunit I4e-38159
NC_002689:78297:8182781827831941368Thermoplasma volcanium GSS1, complete genomeCytochrome bd-type quinol oxidase, subunit 11e-1895.1
NC_009720:2945655:295156829515682951879312Xanthobacter autotrophicus Py2, complete genomecytochrome bd-type quinol oxidase subunit 1-like protein3e-1583.6
NC_009720:251703:270433270433270744312Xanthobacter autotrophicus Py2, complete genomecytochrome bd-type quinol oxidase subunit 1-like protein3e-1583.6
NC_005877:864118:8840838840838854951413Picrophilus torridus DSM 9790, complete genomecytochrome ubiquinol oxidase subunit I6e-1169.3