Pre_GI: BLASTP Hits

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Query: NC_016906:3980122:3990842 Gordonia polyisoprenivorans VH2 chromosome, complete genome

Start: 3990842, End: 3993232, Length: 2391

Host Lineage: Gordonia polyisoprenivorans; Gordonia; Gordoniaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Gordonia polyisoprenivorans strain VH2 was isolated from soil of a rubber tree plantation in Vietnam due to its effective degradation of poly(cis-1,4-isoprene) rubber.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_013223:1848689:1869714186971418720562343Desulfohalobium retbaense DSM 5692, complete genomeCRISPR-associated helicase Cas33e-91337
NC_014820:117408:1205221205221232332712Cenarchaeum symbiosum A, complete genomehelicase1e-69265
NC_013502:102430:373728382802Rhodothermus marinus DSM 4252 plasmid pRMAR01, complete sequenceCRISPR-associated helicase Cas3, Anaes-subtype5e-30133
NC_014831:1140356:1146456114645611495213066Thermaerobacter marianensis DSM 12885 chromosome, complete genomeCRISPR-associated helicase Cas3, Anaes-subtype4e-28127
NC_013854:3126385:3146161314616131492473087Azospirillum sp. B510, complete genomehypothetical protein1e-26122
NC_015416:2838020:2843201284320128456032403Methanosaeta concilii GP-6 chromosome, complete genomeCRISPR-associated helicase Cas31e-23112
NC_011296:1039749:1058944105894410605751632Thermodesulfovibrio yellowstonii DSM 11347, complete genomeCRISPR-associated helicase Cas36e-23110
NC_014215:421683:4467564467564493712616Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1,CRISPR-associated HD domain protein3e-22107
NC_017214:191791:2008002008002038923093Bifidobacterium animalis subsp. lactis BB-12 chromosome, completeATP-dependent helicase1e-20102
NC_017215:1499179:1508188150818815112803093Bifidobacterium animalis subsp. lactis CNCM I-2494 chromosome,ATP-dependent helicase1e-20102
NC_012814:1494331:1503340150334015063933054Bifidobacterium animalis subsp. lactis Bl-04, complete genomeCRISPR-associated helicase Cas3 family protein1e-20102
NC_012815:1494263:1503272150327215063253054Bifidobacterium animalis subsp. lactis DSM 10140, complete genomeCRISPR-associated helicase Cas3 family protein1e-20102
NC_017216:1494190:1503199150319915062523054Bifidobacterium animalis subsp. lactis BLC1, complete genomeCRISPR-associated helicase Cas3 family protein1e-20102
NC_017217:1499832:1508841150884115118943054Bifidobacterium animalis subsp. lactis V9 chromosome, completeCRISPR-associated helicase Cas3 family protein1e-20102
NC_011835:625472:6344816344816375043024Bifidobacterium animalis subsp. lactis AD011 chromosome, completeCRISPR-associated HD domain-containing protein1e-20102
NC_002939:47406:6557065570683352766Geobacter sulfurreducens PCA, complete genomeCRISPR-associated HD domain protein2e-20101
NC_015865:685882:6936206936206959262307Thermococcus sp. 4557 chromosome, complete genomeCRISPR-associated helicase Cas3-like protein5e-1997.1
NC_019978:922978:9399719399719423132343Halobacteroides halobius DSM 5150, complete genomeCRISPR-associated helicase Cas36e-1893.6
NC_000961:135493:1538931538931559652073Pyrococcus horikoshii OT3, complete genomehypothetical protein2e-1792
NC_019942:1370872:1377646137764613798472202Aciduliprofundum sp. MAR08-339, complete genomeDEAD/DEAH box helicase2e-1792
NC_014643:2354507:2362731236273123654992769Rothia dentocariosa ATCC 17931 chromosome, complete genomeCRISPR-associated helicase cas34e-1790.5
NC_012632:884811:9003919003919020371647Sulfolobus islandicus M.16.27 chromosome, complete genomeCRISPR-associated helicase Cas35e-1790.5
NC_012588:800942:8150738150738167191647Sulfolobus islandicus M.14.25 chromosome, complete genomeCRISPR-associated helicase Cas35e-1790.5
NC_000917:1666836:1685466168546616871061641Archaeoglobus fulgidus DSM 4304, complete genomehypothetical protein1e-1689
NC_015573:2975000:2983739298373929862492511Desulfotomaculum kuznetsovii DSM 6115 chromosome, complete genomeCRISPR-associated helicase Cas32e-1584.7
NC_013849:1595924:1614550161455016161781629Ferroglobus placidus DSM 10642 chromosome, complete genomeCRISPR-associated helicase Cas33e-1584.3
NC_015680:1275252:1275252127525212773302079Pyrococcus yayanosii CH1 chromosome, complete genomeCRISPR-associated helicase Cas3 domain-containing protein4e-1584.3
NC_015518:1569936:1579373157937315808301458Acidianus hospitalis W1 chromosome, complete genomeCRISPR-associated helicase Cas34e-1584
NC_000917:40111:6883068830711092280Archaeoglobus fulgidus DSM 4304, complete genomeATP-dependent RNA helicase, putative4e-1584
NC_015680:841783:8522428522428538221581Pyrococcus yayanosii CH1 chromosome, complete genomeCRISPR-associated helicase Cas33e-1481.3
NC_015435:1010973:1034037103403710355331497Metallosphaera cuprina Ar-4 chromosome, complete genomeCRISPR-associated helicase Cas3 family protein9e-1479.7
NC_012589:633500:6413616413616428661506Sulfolobus islandicus L.S.2.15, complete genomeCRISPR-associated helicase Cas38e-1376.6
NC_013769:800000:8077438077438092661524Sulfolobus islandicus L.D.8.5 chromosome, complete genomeCRISPR-associated helicase Cas38e-1376.3
NC_002754:1811500:1817612181761218191591548Sulfolobus solfataricus P2, complete genomeATP-dependent RNA helicase homolog1e-1275.5
NC_000918:246792:2467922467922489812190Aquifex aeolicus VF5, complete genomehypothetical protein1e-1275.5
NC_012623:1874348:1881727188172718832321506Sulfolobus islandicus Y.N.15.51 chromosome, complete genomeCRISPR-associated helicase Cas32e-1275.1
NC_012438:776260:7906217906217929092289Sulfurihydrogenibium azorense Az-Fu1 chromosome, complete genomeCRISPR-associated helicase Cas32e-1274.7
NC_012622:681472:7119947119947134991506Sulfolobus islandicus Y.G.57.14 chromosome, complete genomeCRISPR-associated helicase Cas32e-1274.7
NC_012726:850451:8684538684538699581506Sulfolobus islandicus M.16.4 chromosome, complete genomeCRISPR-associated helicase Cas33e-1274.3
NC_012440:1249941:1259969125996912622182250Persephonella marina EX-H1, complete genomecrispr-associated helicase Cas34e-1273.9
NC_012588:857500:8650148650148665191506Sulfolobus islandicus M.14.25 chromosome, complete genomeCRISPR-associated helicase Cas36e-1273.6
NC_020411:583503:5965795965795988702292Hydrogenobaculum sp. HO, complete genomeCRISPR-associated helicase Cas35e-1273.6
NC_015587:583530:5966065966065988972292Hydrogenobaculum sp. SHO chromosome, complete genomeCRISPR-associated helicase Cas35e-1273.6
NC_015557:583475:5965515965515988422292Hydrogenobaculum sp. 3684 chromosome, complete genomeCRISPR-associated helicase Cas35e-1273.6
NC_012632:943104:9537599537599552641506Sulfolobus islandicus M.16.27 chromosome, complete genomeCRISPR-associated helicase Cas37e-1273.2
NC_014160:748743:7624207624207642341815Thermosphaera aggregans DSM 11486 chromosome, complete genomeCRISPR-associated helicase Cas39e-1272.8
NC_011899:1603500:1626098162609816285662469Halothermothrix orenii H 168, complete genomeCRISPR-associated helicase Cas31e-1172.4
NC_002754:1269463:1292310129231012938571548Sulfolobus solfataricus P2, complete genomeATP-dependent RNA helicase homolog1e-1172.4
NC_000854:770000:7787457787457804571713Aeropyrum pernix K1, complete genomeCRISPR-associated helicase Cas32e-1172
NC_017275:342000:3508063508063523111506Sulfolobus islandicus HVE10/4 chromosome, complete genomeCRISPR-associated helicase Cas32e-1171.6
NC_017276:735678:7456097456097471141506Sulfolobus islandicus REY15A chromosome, complete genomeCRISPR-associated helicase Cas37e-1170.1
NC_017954:934616:9445079445079463391833Thermogladius cellulolyticus 1633 chromosome, complete genomehelicase8e-1169.7
NC_014915:332784:3446143446143469442331Geobacillus sp. Y412MC52 chromosome, complete genomeCRISPR-associated HD domain protein1e-1069.3
NC_014206:1467000:1474954147495414771312178Geobacillus sp. C56-T3 chromosome, complete genomeCRISPR-associated helicase Cas31e-1068.9
NC_015680:841783:8449328449328471092178Pyrococcus yayanosii CH1 chromosome, complete genomeCRISPR-associated helicase Cas32e-1068.9
NC_011978:699500:7103537103537115461194Thermotoga neapolitana DSM 4359, complete genomeCRISPR-associated helicase, Cas3 family2e-1068.2
NC_015975:1056731:1070620107062010729322313Lactobacillus ruminis ATCC 27782 chromosome, complete genomeCRISPR-associated helicase Cas35e-1067.4
NC_009486:1103915:1112028111202811143192292Thermotoga petrophila RKU-1 chromosome, complete genomeCRISPR-associated helicase Cas35e-1067
NC_010803:483713:4952324952324974842253Chlorobium limicola DSM 245, complete genomeCRISPR-associated helicase Cas31e-0965.9
NC_013894:1:1428214282159881707Thermocrinis albus DSM 14484 chromosome, complete genomeCRISPR-associated helicase Cas34e-0964.3
NC_013510:1023348:1039357103935710424403084Thermomonospora curvata DSM 43183, complete genomemetal dependent phosphohydrolase4e-0964.3
NC_012108:616088:6267306267306289912262Desulfobacterium autotrophicum HRM2, complete genomeputative CRISPR-associated helicase Cas3 (ATP-dependent DNA helicase)5e-0963.9
NC_020126:10091703:1010406510104065101063772313Myxococcus stipitatus DSM 14675, complete genomeATP-dependent RNA helicase5e-0963.9
NC_013216:921377:9279929279929302262235Desulfotomaculum acetoxidans DSM 771, complete genomeCRISPR-associated helicase Cas34e-0963.9
NC_008148:258292:2745562745562770212466Rubrobacter xylanophilus DSM 9941, complete genomeCRISPR-associated helicase Cas3, core7e-0963.2
NC_021184:823000:8283508283508306982349Desulfotomaculum gibsoniae DSM 7213, complete genomeCRISPR-associated helicase Cas3/CRISPR-associated endonuclease Cas3-HD1e-0862.4
NC_017161:1117741:1126688112668811289942307Hydrogenobacter thermophilus TK-6 chromosome, complete genomeCRISPR-associated helicase Cas31e-0862.4
NC_013799:1117750:1126830112683011291362307Hydrogenobacter thermophilus TK-6, complete genomeCRISPR-associated helicase1e-0862.4
NC_015966:1316901:1323321132332113254982178Rhodothermus marinus SG0.5JP17-172 chromosome, complete genomemetal dependent phosphohydrolase2e-0862
NC_019897:3251639:3287049328704932894392391Thermobacillus composti KWC4 chromosome, complete genomeCRISPR-associated helicase Cas32e-0861.6
NC_010995:2798000:2807956280795628104092454Cellvibrio japonicus Ueda107, complete genomeCRISPR-associated helicase Cas3 domain protein4e-0860.8
NC_005823:1105524:1130506113050611327582253Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130ATP-dependent RNA helicase4e-0860.5
NC_004342:3164500:3167477316747731697352259Leptospira interrogans serovar Lai str. 56601 chromosome I,ATP-dependent RNA helicase5e-0860.5
NC_016630:28410:3300133001355892589Filifactor alocis ATCC 35896 chromosome, complete genomeATP-dependent RNA helicase2e-0758.9
NC_014209:2204515:2217893221789322202472355Thermoanaerobacter mathranii subsp. mathranii str. A3 chromosome,CRISPR-associated helicase Cas31e-0758.9
NC_017278:258921:2589212589212611582238Thermus sp. CCB_US3_UF1 chromosome, complete genomehypothetical protein1e-0758.9
NC_016051:460624:4687704687704713762607Thermococcus sp. AM4 chromosome, complete genomeCRISPR-associated helicase Cas32e-0758.2
NC_015589:3053504:3063199306319930655742376Desulfotomaculum ruminis DSM 2154 chromosome, complete genomeCRISPR-associated HD domain-containing protein4e-0757.4
NC_011060:1746000:1754304175430417565232220Pelodictyon phaeoclathratiforme BU-1, complete genomeCRISPR-associated helicase Cas35e-0757
NC_014961:969500:9790069790069807781773Desulfurococcus mucosus DSM 2162 chromosome, complete genomeCRISPR-associated helicase Cas35e-0757
NC_012560:1677798:1699773169977317024782706Azotobacter vinelandii DJ, complete genomeCRISPR-associated helicase Cas3, core5e-0757
NC_015676:1663700:1675169167516916779222754Methanosalsum zhilinae DSM 4017 chromosome, complete genomeCRISPR-associated helicase Cas35e-0757
NC_021150:1677811:1699786169978617024912706Azotobacter vinelandii CA6, complete genomeCRISPR-associated helicase Cas3, core5e-0757
NC_015660:3467579:3467579346757934700622484Geobacillus thermoglucosidasius C56-YS93 chromosome, completeCRISPR-associated HD domain-containing protein8e-0756.6
NC_015416:2723189:2751286275128627537542469Methanosaeta concilii GP-6 chromosome, complete genomecrispr-associated helicase Cas31e-0655.8
NC_014727:798191:8099868099868127512766Lactobacillus delbrueckii subsp. bulgaricus ND02 chromosome,crispr-associated helicase cas31e-0655.8
NC_008529:735233:7468327468327495972766Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365, completeCRISPR-associated helicase1e-0655.8
NC_008054:745704:7546887546887574532766Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842, completeCRISPR-associated helicase Cas31e-0655.8
NC_000916:983500:1001172100117210036642493Methanothermobacter thermautotrophicus str. Delta H, completehypothetical protein2e-0655.5
NC_010424:1356000:1362881136288113652682388Candidatus Desulforudis audaxviator MP104C, complete genomeCRISPR-associated helicase Cas32e-0655.1
NC_015436:1287873:1293817129381712964352619Spirochaeta coccoides DSM 17374 chromosome, complete genomeCRISPR-associated helicase Cas32e-0654.7
NC_013526:567500:5765085765085790842577Thermobaculum terrenum ATCC BAA-798 chromosome 2, complete genomeCRISPR-associated helicase Cas34e-0654.3
NC_009921:1668306:1682199168219916846342436Frankia sp. EAN1pec, complete genomeCRISPR-associated helicase Cas34e-0654.3
NC_008278:514600:5190645190645218652802Frankia alni ACN14a, complete genomehypothetical protein; putative DEAD/DEAH box helicase domain4e-0654.3
NC_006361:4574536:4590706459070645934502745Nocardia farcinica IFM 10152, complete genomehypothetical protein4e-0653.9
NC_019673:2051363:2085060208506020872942235Saccharothrix espanaensis DSM 44229 complete genomeCRISPR-associated helicase Cas3 family protein protein4e-0653.9
NC_008526:343445:3475193475193502872769Lactobacillus casei ATCC 334, complete genomeCRISPR-associated helicase5e-0653.9
NC_007333:1743890:1835906183590618387402835Thermobifida fusca YX, complete genomecRISPR-associated helicase Cas3, core9e-0653.1