Pre_GI: BLASTN Hits

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Query: NC_016860:959609 Salmonella enterica subsp. enterica serovar Typhimurium str

Start: 959609, End: 983998, Length: 24390

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. This strain was isolated in Japan in 2000. It is of definitive phage type 12 (DT12) and resistant against mulitple antimicrobials including fluoroquinolones.




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Host Information, e.g. soil, Thermo, Russia



Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_003197:92000092000094439424395Salmonella typhimurium LT2, complete genome047860BLASTN svgBLASTP svg
NC_011080:92432692432694696322638Salmonella enterica subsp. enterica serovar Newport str. SL254,043160BLASTN svgBLASTP svg
NC_011083:96726096726098909921840Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,041720BLASTN svgBLASTP svg
NC_010102:21785942178594220346224869Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,025250BLASTN svgBLASTP svg
NC_006905:94641894641897214125724Salmonella enterica subsp. enterica serovar Choleraesuis str023460BLASTN svgBLASTP svg
NC_010067:24881412488141251937331233Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, complete03782BLASTN svgBLASTP svg
NC_013508:2356865*2356865238859931735Edwardsiella tarda EIB202, complete genome2e-149537BLASTN svgBLASTP svg
NC_020064:1611820*1611820163518523366Serratia marcescens FGI94, complete genome4e-141509BLASTN svgBLASTP svg
NC_012917:1923059*1923059194769524637Pectobacterium carotovorum subsp. carotovorum PC1, complete genome5e-131476BLASTN svgBLASTP svg
NC_012779:2424967*2424967244959924633Edwardsiella ictaluri 93-146, complete genome1e-107398BLASTN svgBLASTP svg
NC_015424:3112637*3112637318003367397Aeromonas veronii B565 chromosome, complete genome2e-69272BLASTN svgBLASTP svg
NC_012917:17405421740542176692926388Pectobacterium carotovorum subsp. carotovorum PC1, complete genome3e-43184BLASTN svgBLASTP svg
NC_009832:16642381664238169623231995Serratia proteamaculans 568, complete genome1e-42182BLASTN svgBLASTP svg
NC_020211:1655826*1655826167870522880Serratia marcescens WW4, complete genome2e-31145BLASTN svgBLASTP svg
NC_015572:1974000*1974000199616522166Methylomonas methanica MC09 chromosome, complete genome3e-1281.8BLASTN svgBLASTP svg
NC_014958:843456*84345686943725982Deinococcus maricopensis DSM 21211 chromosome, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_008702:1094663*1094663111848823826Azoarcus sp. BH72, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_004347:4211241*4211241423643925199Shewanella oneidensis MR-1, complete genome8e-1073.8BLASTN svgBLASTP svg
NC_015061:27708562770856279559924744Rahnella sp. Y9602 chromosome, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_009052:4437649*4437649446134423696Shewanella baltica OS155, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_004741:310382*31038233778027399Shigella flexneri 2a str. 2457T, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_004337:309833*30983333864628814Shigella flexneri 2a str. 301, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_020064:79422*7942212524145820Serratia marcescens FGI94, complete genome3e-0661.9BLASTN svgBLASTP svg