Pre_GI: BLASTN Hits

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Query: NC_016860:2323017 Salmonella enterica subsp. enterica serovar Typhimurium str

Start: 2323017, End: 2360871, Length: 37855

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. This strain was isolated in Japan in 2000. It is of definitive phage type 12 (DT12) and resistant against mulitple antimicrobials including fluoroquinolones.




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Host Information, e.g. soil, Thermo, Russia



Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_018691:3525430*3525430358162756198Alcanivorax dieselolei B5 chromosome, complete genome7e-0867.9BLASTN svgBLASTP svg
NC_015554:12154011215401123622120821Alteromonas sp. SN2 chromosome, complete genome4e-0661.9BLASTN svgBLASTP svg
NC_013854:3200912*3200912322443023519Azospirillum sp. B510, complete genome1e-0973.8BLASTN svgBLASTP svg
NC_010170:39442283944228399478350556Bordetella petrii, complete genome8e-1487.7BLASTN svgBLASTP svg
NC_009792:26887472688747271473325987Citrobacter koseri ATCC BAA-895, complete genome3e-0765.9BLASTN svgBLASTP svg
NC_013282:1804909*1804909182709922191Cronobacter turicensis, complete genome2e-1799.6BLASTN svgBLASTP svg
NC_007298:3764048*3764048379032226275Dechloromonas aromatica RCB, complete genome2e-29139BLASTN svgBLASTP svg
NC_010002:4175809*4175809419921123403Delftia acidovorans SPH-1, complete genome5e-1281.8BLASTN svgBLASTP svg
NC_015563:3401867*3401867342947527609Delftia sp. Cs1-4 chromosome, complete genome5e-1281.8BLASTN svgBLASTP svg
NC_014972:1621850*1621850164648324634Desulfobulbus propionicus DSM 2032 chromosome, complete genome3e-1075.8BLASTN svgBLASTP svg
NC_012796:985000*985000100352118522Desulfovibrio magneticus RS-1, complete genome4e-0661.9BLASTN svgBLASTP svg
NC_011769:2294387*2294387231565121265Desulfovibrio vulgaris str. 'Miyazaki F', complete genome2e-0869.9BLASTN svgBLASTP svg
NC_012912:2800884*2800884281980818925Dickeya zeae Ech1591, complete genome3e-41178BLASTN svgBLASTP svg
NC_012779:26648492664849268361918771Edwardsiella ictaluri 93-146, complete genome2e-57232BLASTN svgBLASTP svg
NC_013508:2587913*2587913262259934687Edwardsiella tarda EIB202, complete genome1e-74289BLASTN svgBLASTP svg
NC_009778:95998295998298509925118Enterobacter sakazakii ATCC BAA-894, complete genome3e-22115BLASTN svgBLASTP svg
NC_013961:2370994*2370994240176230769Erwinia amylovora, complete genome4e-31145BLASTN svgBLASTP svg
NC_014306:35249803524980358375158772Erwinia billingiae Eb661, complete genome9e-63250BLASTN svgBLASTP svg
NC_010694:12508411250841127452923689Erwinia tasmaniensis, complete genome2e-54222BLASTN svgBLASTP svg
CU928145:82436782436784378119415Escherichia coli 55989 chromosome, complete genome1e-18103BLASTN svgBLASTP svg
NC_011748:82436782436784378119415Escherichia coli 55989, complete genome1e-18103BLASTN svgBLASTP svg
NC_008563:50119975011997503931827322Escherichia coli APEC O1, complete genome4e-148533BLASTN svgBLASTP svg
NC_008563:29099452909945293044120497Escherichia coli APEC O1, complete genome1e-18103BLASTN svgBLASTP svg
NC_008563:1175035*1175035119859923565Escherichia coli APEC O1, complete genome1e-18103BLASTN svgBLASTP svg
NC_010468:2265423*2265423228519619774Escherichia coli ATCC 8739, complete genome7e-39170BLASTN svgBLASTP svg
NC_004431:14016811401681142114919469Escherichia coli CFT073, complete genome1e-18103BLASTN svgBLASTP svg
NC_004431:30409533040953306393422982Escherichia coli CFT073, complete genome1e-138502BLASTN svgBLASTP svg
NC_004431:13529061352906137651123606Escherichia coli CFT073, complete genome5e-21111BLASTN svgBLASTP svg
NC_004431:30126683012668303118918522Escherichia coli CFT073, complete genome1e-18103BLASTN svgBLASTP svg
NC_009801:17566101756610177871522106Escherichia coli E24377A, complete genome7e-39170BLASTN svgBLASTP svg
NC_009800:16575501657550168574228193Escherichia coli HS, complete genome3e-53218BLASTN svgBLASTP svg
NC_009800:2788164*2788164280740719244Escherichia coli HS, complete genome3e-1075.8BLASTN svgBLASTP svg
CU928160:16688421668842169164522804Escherichia coli IAI1 chromosome, complete genome7e-39170BLASTN svgBLASTP svg
NC_011750:5045927*5045927506827722351Escherichia coli IAI39 chromosome, complete genome0664BLASTN svgBLASTP svg
NC_000913:1625500*1625500165193926440Escherichia coli K12, complete genome7e-39170BLASTN svgBLASTP svg
NC_000913:558920*55892058509926180Escherichia coli K12, complete genome1e-18103BLASTN svgBLASTP svg
CP002516:2305659*2305659232825322595Escherichia coli KO11, complete genome2e-36163BLASTN svgBLASTP svg
AP010958:60471960471962691322195Escherichia coli O103:H2 str. 12009 DNA, complete genome1e-18103BLASTN svgBLASTP svg
NC_010473:62381062381065051726708Escherichia coli str. K-12 substr. DH10B, complete genome1e-18103BLASTN svgBLASTP svg
NC_010473:498252*49825252418825937Escherichia coli str. K-12 substr. DH10B, complete genome1e-18103BLASTN svgBLASTP svg
NC_010473:1712984*1712984174109928116Escherichia coli str. K-12 substr. DH10B, complete genome7e-39170BLASTN svgBLASTP svg
NC_011751:1405381*1405381142709921719Escherichia coli UMN026 chromosome, complete genome1e-18103BLASTN svgBLASTP svg
NC_011751:13774571377457140058923133Escherichia coli UMN026 chromosome, complete genome1e-18103BLASTN svgBLASTP svg
NC_011751:18596061859606188482925224Escherichia coli UMN026 chromosome, complete genome7e-39170BLASTN svgBLASTP svg
NC_011751:643976*64397666569121716Escherichia coli UMN026 chromosome, complete genome1e-18103BLASTN svgBLASTP svg
NC_007946:28947932894793291753922747Escherichia coli UTI89, complete genome1e-18103BLASTN svgBLASTP svg
NC_007946:1239278*1239278125938320106Escherichia coli UTI89, complete genome1e-18103BLASTN svgBLASTP svg
CP002185:17708151770815179359922785Escherichia coli W, complete genome2e-36163BLASTN svgBLASTP svg
AC_000091:16270491627049165562928581Escherichia coli W3110 DNA, complete genome7e-39170BLASTN svgBLASTP svg
AC_000091:55892055892058720428285Escherichia coli W3110 DNA, complete genome1e-18103BLASTN svgBLASTP svg
NC_011740:45203734520373454479624424Escherichia fergusonii ATCC 35469, complete genome4e-148533BLASTN svgBLASTP svg
NC_011740:27699612769961278959919639Escherichia fergusonii ATCC 35469, complete genome1e-18103BLASTN svgBLASTP svg
NC_014973:54449544497854124093Geobacter sp. M18 chromosome, complete genome7e-0867.9BLASTN svgBLASTP svg
NC_015497:12878771287877133880050924Glaciecola agarilytica 4H-3-7+YE-5 chromosome, complete genome4e-0661.9BLASTN svgBLASTP svg
NC_007645:34347953434795345695122157Hahella chejuensis KCTC 2396, complete genome7e-1177.8BLASTN svgBLASTP svg
NC_006512:728281*72828175150523225Idiomarina loihiensis L2TR, complete genome8e-1797.6BLASTN svgBLASTP svg
NC_013166:1841446*1841446185969318248Kangiella koreensis DSM 16069, complete genome3e-0765.9BLASTN svgBLASTP svg
NC_009648:22527572252757228316130405Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genome3e-146527BLASTN svgBLASTP svg
NC_015572:25419682541968256409922132Methylomonas methanica MC09 chromosome, complete genome3e-1075.8BLASTN svgBLASTP svg
NC_020126:2883194*2883194290469121498Myxococcus stipitatus DSM 14675, complete genome4e-0661.9BLASTN svgBLASTP svg
NC_004757:1021355*1021355105233830984Nitrosomonas europaea ATCC 19718, complete genome1e-0663.9BLASTN svgBLASTP svg
NC_008344:49039*4903913459985561Nitrosomonas eutropha C91, complete genome2e-1489.7BLASTN svgBLASTP svg
NC_015222:14925001492500151210019601Nitrosomonas sp. AL212 chromosome, complete genome7e-1177.8BLASTN svgBLASTP svg
NC_015731:13817371381737140468922953Nitrosomonas sp. Is79A3 chromosome, complete genome1e-0663.9BLASTN svgBLASTP svg
NC_014837:1570500*1570500160135230853Pantoea sp. At-9b chromosome, complete genome1e-1283.8BLASTN svgBLASTP svg
NC_014837:31265433126543315305826516Pantoea sp. At-9b chromosome, complete genome1e-61246BLASTN svgBLASTP svg
NC_008686:405159*40515944047735319Paracoccus denitrificans PD1222 chromosome 1, complete sequence1e-0663.9BLASTN svgBLASTP svg
NC_012917:1840172*1840172189159251421Pectobacterium carotovorum subsp. carotovorum PC1, complete genome6e-36161BLASTN svgBLASTP svg
NC_013421:29722692972269300638334115Pectobacterium wasabiae WPP163, complete genome2e-159571BLASTN svgBLASTP svg
NC_012962:18270001827000184987822879Photorhabdus asymbiotica, complete genome3e-0765.9BLASTN svgBLASTP svg
NC_012962:44270004427000445406927070Photorhabdus asymbiotica, complete genome5e-0971.9BLASTN svgBLASTP svg
NC_012962:10681021068102112169753596Photorhabdus asymbiotica, complete genome5e-0971.9BLASTN svgBLASTP svg
NC_012962:34999003499900355871558816Photorhabdus asymbiotica, complete genome1e-0663.9BLASTN svgBLASTP svg
NC_012962:30600633060063308387423812Photorhabdus asymbiotica, complete genome4e-0661.9BLASTN svgBLASTP svg
NC_012962:26395002639500266574326244Photorhabdus asymbiotica, complete genome1e-0663.9BLASTN svgBLASTP svg
NC_012962:25877562587756263945151696Photorhabdus asymbiotica, complete genome4e-0661.9BLASTN svgBLASTP svg
NC_012962:10415181041518106637824861Photorhabdus asymbiotica, complete genome4e-0661.9BLASTN svgBLASTP svg
NC_005126:36304593630459368847858020Photorhabdus luminescens subsp. laumondii TTO1, complete genome1e-1593.7BLASTN svgBLASTP svg
NC_005126:15490661549066157724728182Photorhabdus luminescens subsp. laumondii TTO1, complete genome1e-0663.9BLASTN svgBLASTP svg
NC_005126:43337674333767439509961333Photorhabdus luminescens subsp. laumondii TTO1, complete genome5e-1591.7BLASTN svgBLASTP svg
NC_005126:4824500*4824500485430329804Photorhabdus luminescens subsp. laumondii TTO1, complete genome4e-0661.9BLASTN svgBLASTP svg
NC_005126:14250014250016059218093Photorhabdus luminescens subsp. laumondii TTO1, complete genome5e-1591.7BLASTN svgBLASTP svg
NC_005126:5188976*5188976521454825573Photorhabdus luminescens subsp. laumondii TTO1, complete genome2e-1179.8BLASTN svgBLASTP svg
NC_005126:27569842756984277869021707Photorhabdus luminescens subsp. laumondii TTO1, complete genome4e-0661.9BLASTN svgBLASTP svg
NC_005126:48575004857500488024422745Photorhabdus luminescens subsp. laumondii TTO1, complete genome2e-1179.8BLASTN svgBLASTP svg
NC_005126:42105004210500424678336284Photorhabdus luminescens subsp. laumondii TTO1, complete genome2e-1179.8BLASTN svgBLASTP svg
NC_005126:34853303485330350809922770Photorhabdus luminescens subsp. laumondii TTO1, complete genome2e-1179.8BLASTN svgBLASTP svg
NC_005126:44239644423964444767223709Photorhabdus luminescens subsp. laumondii TTO1, complete genome2e-0869.9BLASTN svgBLASTP svg
NC_005126:38120543812054388079068737Photorhabdus luminescens subsp. laumondii TTO1, complete genome2e-0869.9BLASTN svgBLASTP svg
NC_005126:16138181613818165143837621Photorhabdus luminescens subsp. laumondii TTO1, complete genome7e-1177.8BLASTN svgBLASTP svg
NC_008228:2295841*2295841231867322833Pseudoalteromonas atlantica T6c, complete genome1e-1283.8BLASTN svgBLASTP svg
NC_007492:29940362994036302311329078Pseudomonas fluorescens PfO-1, complete genome4e-0661.9BLASTN svgBLASTP svg
NC_004578:40613724061372409399732626Pseudomonas syringae pv. tomato str. DC3000, complete genome6e-36161BLASTN svgBLASTP svg
NC_015458:19388601938860196301624157Pusillimonas sp. T7-7 chromosome, complete genome3e-1695.6BLASTN svgBLASTP svg
NC_015061:12519051251905128092529021Rahnella sp. Y9602 chromosome, complete genome8e-48200BLASTN svgBLASTP svg
NC_007974:13817613817617323335058Ralstonia metallidurans CH34 chromosome 2, complete sequence1e-0663.9BLASTN svgBLASTP svg
NC_010067:191190*19119023335342164Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, complete01267BLASTN svgBLASTP svg
NC_010067:892729*89272992523832510Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, complete01116BLASTN svgBLASTP svg
NC_010067:2304313*2304313233059926287Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, complete0731BLASTN svgBLASTP svg
NC_010067:660659*66065968851527857Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, complete05027BLASTN svgBLASTP svg
NC_010067:63268363268365799725315Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, complete08681BLASTN svgBLASTP svg
NC_010067:37539713753971377672522755Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, complete04468BLASTN svgBLASTP svg
NC_011149:39303583930358395376323406Salmonella enterica subsp. enterica serovar Agona str. SL483,07539BLASTN svgBLASTP svg
NC_011149:31870223187022321200624985Salmonella enterica subsp. enterica serovar Agona str. SL483,9e-26127BLASTN svgBLASTP svg
NC_011149:22945002294500231681122312Salmonella enterica subsp. enterica serovar Agona str. SL483,026200BLASTN svgBLASTP svg
NC_011149:1236689*1236689125609919411Salmonella enterica subsp. enterica serovar Agona str. SL483,01534BLASTN svgBLASTP svg
NC_006905:13424741342474137811135638Salmonella enterica subsp. enterica serovar Choleraesuis str0852BLASTN svgBLASTP svg
NC_006905:23552902355290237961224323Salmonella enterica subsp. enterica serovar Choleraesuis str026340BLASTN svgBLASTP svg
NC_006905:39427533942753396819425442Salmonella enterica subsp. enterica serovar Choleraesuis str06236BLASTN svgBLASTP svg
NC_011083:23750612375061241289137831Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,039790BLASTN svgBLASTP svg
NC_011083:40200004020000404339423395Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,06623BLASTN svgBLASTP svg
NC_011080:23426722342672236709924428Salmonella enterica subsp. enterica serovar Newport str. SL254,026010BLASTN svgBLASTP svg
NC_011080:39764413976441399977023330Salmonella enterica subsp. enterica serovar Newport str. SL254,06377BLASTN svgBLASTP svg
NC_011080:27224922722492274217119680Salmonella enterica subsp. enterica serovar Newport str. SL254,1e-148535BLASTN svgBLASTP svg
NC_006511:37940173794017381725023234Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC06417BLASTN svgBLASTP svg
NC_006511:3079512*3079512310454825037Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC5e-21111BLASTN svgBLASTP svg
NC_006511:682863*68286370873225870Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC020550BLASTN svgBLASTP svg
NC_010102:683444*68344472210838665Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,046480BLASTN svgBLASTP svg
NC_010102:17797071779707181158331877Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,0751BLASTN svgBLASTP svg
NC_010102:11372471137247116298725741Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,7e-79303BLASTN svgBLASTP svg
NC_010102:39554793955479397940323925Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,07864BLASTN svgBLASTP svg
NC_003198:2453074*2453074247785124778Salmonella enterica subsp. enterica serovar Typhi str. CT18,1e-0663.9BLASTN svgBLASTP svg
NC_003198:3126548*3126548315161725070Salmonella enterica subsp. enterica serovar Typhi str. CT18,2e-23119BLASTN svgBLASTP svg
NC_003198:19082381908238193517826941Salmonella enterica subsp. enterica serovar Typhi str. CT18,5e-49204BLASTN svgBLASTP svg
NC_003198:38241873824187384903924853Salmonella enterica subsp. enterica serovar Typhi str. CT18,06433BLASTN svgBLASTP svg
NC_003198:22978372297837232227924443Salmonella enterica subsp. enterica serovar Typhi str. CT18,026000BLASTN svgBLASTP svg
NC_004631:3112043*3112043313711225070Salmonella enterica subsp. enterica serovar Typhi Ty2, complete2e-23119BLASTN svgBLASTP svg
NC_004631:38096783809678383452924852Salmonella enterica subsp. enterica serovar Typhi Ty2, complete06433BLASTN svgBLASTP svg
NC_004631:685357*68535771085325497Salmonella enterica subsp. enterica serovar Typhi Ty2, complete020620BLASTN svgBLASTP svg
NC_003197:23274742327474236419536722Salmonella typhimurium LT2, complete genome046930BLASTN svgBLASTP svg
NC_003197:40058574005857402918723331Salmonella typhimurium LT2, complete genome06631BLASTN svgBLASTP svg
NC_003197:27207262720726274079420069Salmonella typhimurium LT2, complete genome1e-148535BLASTN svgBLASTP svg
NC_020064:3157656*3157656318828830633Serratia marcescens FGI94, complete genome2e-51212BLASTN svgBLASTP svg
NC_015566:3659318*3659318367796918652Serratia sp. AS12 chromosome, complete genome5e-1591.7BLASTN svgBLASTP svg
NC_015566:3622385*3622385364177919395Serratia sp. AS12 chromosome, complete genome2e-29139BLASTN svgBLASTP svg
NC_009092:1684467*1684467170308618620Shewanella loihica PV-4, complete genome8e-1797.6BLASTN svgBLASTP svg
NC_009092:179226*17922620808728862Shewanella loihica PV-4, complete genome1e-1283.8BLASTN svgBLASTP svg
NC_008577:2910383*2910383292929118909Shewanella sp. ANA-3 chromosome 1, complete sequence8e-1797.6BLASTN svgBLASTP svg
NC_008321:21900002190000221007020071Shewanella sp. MR-4, complete genome7e-45190BLASTN svgBLASTP svg
NC_010658:1933605*1933605196015326549Shigella boydii CDC 3083-94, complete genome0678BLASTN svgBLASTP svg
NC_007613:10380001038000106059922600Shigella boydii Sb227, complete genome8e-1487.7BLASTN svgBLASTP svg
NC_004741:20097692009769203209922331Shigella flexneri 2a str. 2457T, complete genome5e-21111BLASTN svgBLASTP svg
NC_004337:20359452035945205669020746Shigella flexneri 2a str. 301, complete genome5e-21111BLASTN svgBLASTP svg
NC_008258:2045000*2045000206275017751Shigella flexneri 5 str. 8401, complete genome5e-21111BLASTN svgBLASTP svg
NC_007384:2933625*2933625295770924085Shigella sonnei Ss046, complete genome4e-0661.9BLASTN svgBLASTP svg
NC_007712:1182518*1182518121806435547Sodalis glossinidius str. 'morsitans', complete genome3e-0765.9BLASTN svgBLASTP svg
NC_007712:40235164023516406109937584Sodalis glossinidius str. 'morsitans', complete genome8e-1487.7BLASTN svgBLASTP svg
NC_014623:44264164426416444997023555Stigmatella aurantiaca DW4/3-1 chromosome, complete genome1e-0663.9BLASTN svgBLASTP svg
NC_015682:1074263*1074263109616721905Thermodesulfobacterium sp. OPB45 chromosome, complete genome4e-0661.9BLASTN svgBLASTP svg
NC_015682:205900*20590025109945200Thermodesulfobacterium sp. OPB45 chromosome, complete genome1e-0663.9BLASTN svgBLASTP svg
NC_014228:33915003391500342834536846Xenorhabdus nematophila ATCC 19061, complete genome5e-1281.8BLASTN svgBLASTP svg
NC_015224:32917363291736331359921864Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,9e-26127BLASTN svgBLASTP svg
NC_006155:32379903237990326294924960Yersinia pseudotuberculosis IP 32953, complete genome4e-68268BLASTN svgBLASTP svg
NC_010634:31557413155741318046024720Yersinia pseudotuberculosis PB1/+, complete genome6e-73283BLASTN svgBLASTP svg