Pre_GI: BLASTP Hits

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Query: NC_016846:24500:45949 Klebsiella pneumoniae subsp. pneumoniae HS11286 plasmid pKPHS2,

Start: 45949, End: 46674, Length: 726

Host Lineage: Klebsiella pneumoniae; Klebsiella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This organism is the most medically important organism within the genus Klebsiella. It is an environmental organism found in water, soil, and on the surface of plants. Several strains have been isolated from plant tissues and are nitrogen-fixing endophytes that may be a source of nitrogen for the plant. Other strains can become opportunistic pathogens which infect humans, and typically causes hospital-acquired infections in immunocompromised patients. Major sites of infection include the lungs, where it causes a type of pneumonia, and urinary tract infections. Klebsiella can also enter the bloodstream (bacterimia) and cause sepsis. The pathogen can also infect animals and cause inflammation of the uterus in horses as well as more generalized infections in other mammals. This organism expresses numerous pathogenicity factors, including multiple adhesins, capsular polysaccharide, siderophores, and lipopolysaccharide for the evasion of host defenses. The multiple antibiotic resistance genes carried on the chromosome inhibit efforts to clear the organism from infected patients via antibiotic use.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_007607:87000:101371101371102117747Shigella dysenteriae Sd197 plasmid pSD1_197, complete sequenceF pilin acetylation protein6e-56217
NC_007414:56508:903109031091056747Escherichia coli O157:H7 EDL933 plasmid pO157, complete sequenceF pilin acetylase7e-56217
NC_004851:191709:204097204097204843747Shigella flexneri 2a str. 301 plasmid pCP301, complete sequenceF pilin acetylation protein1e-55216
NC_017319:192482:203974203974204726753Shigella flexneri 2002017 plasmid pSFxv_1, complete sequenceF pilin acetylation protein2e-55216
NC_010660:175200:188255188255189001747Shigella boydii CDC 3083-94 plasmid pBS512_211, complete sequencetype IV secretion-like conjugative transfer system pilin acetylase TraX2e-55216
NC_007608:97092:108224108224108970747Shigella boydii Sb227 plasmid pSB4_227, complete sequenceF pilin acetylation protein2e-55216
NC_009378:106193:111435111435112172738Yersinia pestis Pestoides F plasmid MT, complete sequenceconjugative transfer fimbrial acetylation protein4e-52204
NC_007385:157516:175899175899176646748Shigella sonnei Ss046 plasmid pSS_046, complete sequence2e-35149
NC_013716:4306695:433824643382464338584339Citrobacter rodentium ICC168, complete genome6e-30130
NC_013285:1:152471524715981735Cronobacter turicensis plasmid pCTU3, complete sequencehypothetical protein8e-21100
NC_009787:17344:324793247933237759Escherichia coli E24377A plasmid pETEC_35, complete sequencetype-F conjugative transfer system pilin acetylase TraX4e-1478.6
NC_015949:71474:904529045291156705Caldicellulosiruptor lactoaceticus 6A chromosome, complete genomeTraX family protein7e-0857.8
NC_017271:2449504:246654124665412467191651Xanthomonas campestris pv. raphani 756C chromosome, completeTrbP protein2e-0653.1