Pre_GI: BLASTN Hits

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Query: NC_016845:411844 Klebsiella pneumoniae subsp. pneumoniae HS11286 chromosome,

Start: 411844, End: 439332, Length: 27489

Host Lineage: Klebsiella pneumoniae; Klebsiella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This organism is the most medically important organism within the genus Klebsiella. It is an environmental organism found in water, soil, and on the surface of plants. Several strains have been isolated from plant tissues and are nitrogen-fixing endophytes that may be a source of nitrogen for the plant. Other strains can become opportunistic pathogens which infect humans, and typically causes hospital-acquired infections in immunocompromised patients. Major sites of infection include the lungs, where it causes a type of pneumonia, and urinary tract infections. Klebsiella can also enter the bloodstream (bacterimia) and cause sepsis. The pathogen can also infect animals and cause inflammation of the uterus in horses as well as more generalized infections in other mammals. This organism expresses numerous pathogenicity factors, including multiple adhesins, capsular polysaccharide, siderophores, and lipopolysaccharide for the evasion of host defenses. The multiple antibiotic resistance genes carried on the chromosome inhibit efforts to clear the organism from infected patients via antibiotic use.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_009648:4958500*4958500498569827199Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genome024850BLASTN svgBLASTP svg
NC_013850:49933074993307502215628850Klebsiella variicola At-22 chromosome, complete genome011060BLASTN svgBLASTP svg
NC_020181:3518396*3518396354042322028Enterobacter aerogenes EA1509E, complete genome03340BLASTN svgBLASTP svg
NC_015663:19348631934863195458219720Enterobacter aerogenes KCTC 2190 chromosome, complete genome03098BLASTN svgBLASTP svg
NC_013956:45500045500047503720038Pantoea ananatis LMG 20103 chromosome, complete genome01776BLASTN svgBLASTP svg
NC_013508:34361734361737314529529Edwardsiella tarda EIB202, complete genome01683BLASTN svgBLASTP svg
NC_007712:532500*53250055659924100Sodalis glossinidius str. 'morsitans', complete genome01227BLASTN svgBLASTP svg
NC_006905:4486433*4486433450919922767Salmonella enterica subsp. enterica serovar Choleraesuis str0854BLASTN svgBLASTP svg
NC_003197:45518804551880457449822619Salmonella typhimurium LT2, complete genome0831BLASTN svgBLASTP svg
NC_011080:45430004543000457179028791Salmonella enterica subsp. enterica serovar Newport str. SL254,0821BLASTN svgBLASTP svg
NC_004431:4955658*4955658497950623849Escherichia coli CFT073, complete genome0821BLASTN svgBLASTP svg
NC_013961:3269368*3269368330269433327Erwinia amylovora, complete genome0789BLASTN svgBLASTP svg
NC_013592:577831*57783159805520225Dickeya dadantii Ech586, complete genome7e-177628BLASTN svgBLASTP svg
NC_008700:36923333692333371504922717Shewanella amazonensis SB2B, complete genome1e-159571BLASTN svgBLASTP svg
NC_004547:442927*44292748635443428Erwinia carotovora subsp. atroseptica SCRI1043, complete genome1e-147531BLASTN svgBLASTP svg
NC_004547:667988*66798869597327986Erwinia carotovora subsp. atroseptica SCRI1043, complete genome7e-143515BLASTN svgBLASTP svg
NC_009092:52151952151954593124413Shewanella loihica PV-4, complete genome2e-137498BLASTN svgBLASTP svg
AP010958:5090696*5090696512565934964Escherichia coli O103:H2 str. 12009 DNA, complete genome2e-130474BLASTN svgBLASTP svg
NC_010506:51950005195000521688621887Shewanella woodyi ATCC 51908, complete genome3e-62248BLASTN svgBLASTP svg
NC_008322:641197*64119766698525789Shewanella sp. MR-7, complete genome6e-54220BLASTN svgBLASTP svg
NC_004347:71809171809175739939309Shewanella oneidensis MR-1, complete genome9e-50206BLASTN svgBLASTP svg
NC_005085:43353334335333437106535733Chromobacterium violaceum ATCC 12472, complete genome1e-45192BLASTN svgBLASTP svg
NC_016002:3704006*3704006373059326588Pseudogulbenkiania sp. NH8B, complete genome2e-41178BLASTN svgBLASTP svg
NC_005126:4824500*4824500485430329804Photorhabdus luminescens subsp. laumondii TTO1, complete genome5e-36161BLASTN svgBLASTP svg
NC_013209:19253411925341195459929259Acetobacter pasteurianus IFO 3283-01, complete genome1e-30143BLASTN svgBLASTP svg
NC_010688:60501860501862846423447Xanthomonas campestris pv. campestris, complete genome2e-29139BLASTN svgBLASTP svg
NC_007086:62689162689165055223662Xanthomonas campestris pv. campestris str. 8004, complete genome2e-29139BLASTN svgBLASTP svg
NC_003902:62482862482864848923662Xanthomonas campestris pv. campestris str. ATCC 33913, complete2e-29139BLASTN svgBLASTP svg
NC_012691:2614603*26146032727599112997Tolumonas auensis DSM 9187, complete genome4e-27131BLASTN svgBLASTP svg
NC_006526:19767791976779202212445346Zymomonas mobilis subsp. mobilis ZM4, complete genome3e-25125BLASTN svgBLASTP svg
NC_015856:43425004342500437154729048Collimonas fungivorans Ter331 chromosome, complete genome1e-24123BLASTN svgBLASTP svg
NC_015850:2259769*2259769228620926441Acidithiobacillus caldus SM-1 chromosome, complete genome1e-21113BLASTN svgBLASTP svg
NC_015859:16315731631573165925327681Corynebacterium variabile DSM 44702 chromosome, complete genome2e-19105BLASTN svgBLASTP svg
NC_005061:65861*658618718421324Candidatus Blochmannia floridanus, complete genome4e-18101BLASTN svgBLASTP svg
NC_014323:50510415051041507664325603Herbaspirillum seropedicae SmR1 chromosome, complete genome2e-1695.6BLASTN svgBLASTP svg
NC_013173:3890370*3890370390934018971Desulfomicrobium baculatum DSM 4028, complete genome2e-1695.6BLASTN svgBLASTP svg
NC_015222:2475792*2475792249670020909Nitrosomonas sp. AL212 chromosome, complete genome9e-1693.7BLASTN svgBLASTP svg
NC_008752:10259801025980106353637557Acidovorax avenae subsp. citrulli AAC00-1, complete genome9e-1693.7BLASTN svgBLASTP svg
NC_012522:46922604692260471230420045Rhodococcus opacus B4, complete genome4e-1591.7BLASTN svgBLASTP svg
NC_019973:60287956028795605165122857Mesorhizobium australicum WSM2073, complete genome6e-1487.7BLASTN svgBLASTP svg
NC_015675:66518996651899667736225464Mesorhizobium opportunistum WSM2075 chromosome, complete genome6e-1487.7BLASTN svgBLASTP svg
NC_015388:2143329*2143329217016326835Desulfobacca acetoxidans DSM 11109 chromosome, complete genome2e-1385.7BLASTN svgBLASTP svg
NC_012968:43553243553246033724806Methylotenera mobilis JLW8, complete genome2e-1385.7BLASTN svgBLASTP svg
NC_009140:121107*12110714459223486Salmonella enterica enterica sv Newport str. SL254, complete2e-1385.7BLASTN svgBLASTP svg
NC_010338:4481356*4481356450312821773Caulobacter sp. K31, complete genome9e-1383.8BLASTN svgBLASTP svg
NC_007951:20458302045830206373317904Burkholderia xenovorans LB400 chromosome 1, complete sequence2e-1075.8BLASTN svgBLASTP svg
NC_013406:59544725954472597839723926Paenibacillus sp. Y412MC10 chromosome, complete genome8e-1073.8BLASTN svgBLASTP svg
NC_014932:1232346*1232346130968277337Bartonella clarridgeiae 73, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_014734:1428282*1428282145110222821Paludibacter propionicigenes WB4 chromosome, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_009140:60806*608068772626921Salmonella enterica enterica sv Newport str. SL254, complete1e-0869.9BLASTN svgBLASTP svg
NC_007643:185135*18513520908123947Rhodospirillum rubrum ATCC 11170, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_004463:21581162158116223609977984Bradyrhizobium japonicum USDA 110, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_002935:20596722059672207754417873Corynebacterium diphtheriae NCTC 13129, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_008268:46695304669530469509925570Rhodococcus sp. RHA1, complete genome5e-0867.9BLASTN svgBLASTP svg
NC_014216:2538500*2538500256387025371Desulfurivibrio alkaliphilus AHT2 chromosome, complete genome5e-0867.9BLASTN svgBLASTP svg
NC_010554:2789722*2789722282150731786Proteus mirabilis HI4320, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_009142:5647737*5647737567459926863Saccharopolyspora erythraea NRRL 2338, complete genome8e-0763.9BLASTN svgBLASTP svg
NC_015376:20100092010009204069430686Burkholderia gladioli BSR3 chromosome chromosome 2, complete3e-0661.9BLASTN svgBLASTP svg
NC_014623:58859035885903590954323641Stigmatella aurantiaca DW4/3-1 chromosome, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_011830:15044971504497153619331697Desulfitobacterium hafniense DCB-2, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_002935:1237585*1237585131159974015Corynebacterium diphtheriae NCTC 13129, complete genome3e-0661.9BLASTN svgBLASTP svg