Pre_GI: BLASTN Hits

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Query: NC_016845:3448881 Klebsiella pneumoniae subsp. pneumoniae HS11286 chromosome,

Start: 3448881, End: 3490599, Length: 41719

Host Lineage: Klebsiella pneumoniae; Klebsiella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This organism is the most medically important organism within the genus Klebsiella. It is an environmental organism found in water, soil, and on the surface of plants. Several strains have been isolated from plant tissues and are nitrogen-fixing endophytes that may be a source of nitrogen for the plant. Other strains can become opportunistic pathogens which infect humans, and typically causes hospital-acquired infections in immunocompromised patients. Major sites of infection include the lungs, where it causes a type of pneumonia, and urinary tract infections. Klebsiella can also enter the bloodstream (bacterimia) and cause sepsis. The pathogen can also infect animals and cause inflammation of the uterus in horses as well as more generalized infections in other mammals. This organism expresses numerous pathogenicity factors, including multiple adhesins, capsular polysaccharide, siderophores, and lipopolysaccharide for the evasion of host defenses. The multiple antibiotic resistance genes carried on the chromosome inhibit efforts to clear the organism from infected patients via antibiotic use.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_004088:2640440*2640440268328342844Yersinia pestis KIM, complete genome036090BLASTN svgBLASTP svg
NC_010634:1916000*1916000195790341904Yersinia pseudotuberculosis PB1/+, complete genome035870BLASTN svgBLASTP svg
NC_008150:1420825*1420825146012739303Yersinia pestis Antiqua, complete genome035440BLASTN svgBLASTP svg
NC_005810:1794490*1794490183441839929Yersinia pestis biovar Microtus str. 91001, complete genome035430BLASTN svgBLASTP svg
NC_010159:21645002164500220861544116Yersinia pestis Angola, complete genome035360BLASTN svgBLASTP svg
NC_006155:1916426*1916426195791941494Yersinia pseudotuberculosis IP 32953, complete genome035070BLASTN svgBLASTP svg
NC_003143:2137945*2137945217709939155Yersinia pestis CO92, complete genome035050BLASTN svgBLASTP svg
NC_011751:2281653*2281653230787726225Escherichia coli UMN026 chromosome, complete genome029910BLASTN svgBLASTP svg
NC_008253:1938975*1938975200160362629Escherichia coli 536, complete genome029600BLASTN svgBLASTP svg
NC_007946:2074098*2074098210032326226Escherichia coli UTI89, complete genome029500BLASTN svgBLASTP svg
NC_004431:2185750*2185750224915063401Escherichia coli CFT073, complete genome029500BLASTN svgBLASTP svg
CU928145:2237099*2237099226332326225Escherichia coli 55989 chromosome, complete genome029500BLASTN svgBLASTP svg
NC_011748:2237099*2237099226332326225Escherichia coli 55989, complete genome029500BLASTN svgBLASTP svg
NC_008563:20948552094855212109926245Escherichia coli APEC O1, complete genome029150BLASTN svgBLASTP svg
CP002797:20253302025330205156426235Escherichia coli NA114, complete genome026510BLASTN svgBLASTP svg
NC_011750:1134721*1134721116006625346Escherichia coli IAI39 chromosome, complete genome025200BLASTN svgBLASTP svg
NC_020181:473170*47317050009926930Enterobacter aerogenes EA1509E, complete genome018830BLASTN svgBLASTP svg
NC_009792:85922885922888559926372Citrobacter koseri ATCC BAA-895, complete genome017730BLASTN svgBLASTP svg
NC_011751:23270142327014235440227389Escherichia coli UMN026 chromosome, complete genome017060BLASTN svgBLASTP svg
NC_013592:2968500*2968500300769039191Dickeya dadantii Ech586, complete genome01100BLASTN svgBLASTP svg
NC_014500:3097362*3097362318793090569Dickeya dadantii 3937 chromosome, complete genome0751BLASTN svgBLASTP svg
NC_014500:31752833175283321401838736Dickeya dadantii 3937 chromosome, complete genome0735BLASTN svgBLASTP svg
NC_004547:18375001837500185898821489Erwinia carotovora subsp. atroseptica SCRI1043, complete genome4e-127464BLASTN svgBLASTP svg
NC_013421:70100570100575174450740Pectobacterium wasabiae WPP163, complete genome4e-59238BLASTN svgBLASTP svg
NC_014500:1066911*1066911109884731937Dickeya dadantii 3937 chromosome, complete genome2e-51212BLASTN svgBLASTP svg
NC_013592:956829*95682998781830990Dickeya dadantii Ech586, complete genome2e-51212BLASTN svgBLASTP svg
NC_012880:3529017*3529017356582436808Dickeya dadantii Ech703, complete genome2e-45192BLASTN svgBLASTP svg
NC_012912:4012112*4012112403907126960Dickeya zeae Ech1591, complete genome2e-45192BLASTN svgBLASTP svg
NC_012880:37486653748665378917040506Dickeya dadantii Ech703, complete genome8e-45190BLASTN svgBLASTP svg
NC_012917:569856*56985658778417929Pectobacterium carotovorum subsp. carotovorum PC1, complete genome3e-38168BLASTN svgBLASTP svg
NC_012880:3982383*3982383401264230260Dickeya dadantii Ech703, complete genome7e-36161BLASTN svgBLASTP svg
NC_012912:1701231*1701231174963148401Dickeya zeae Ech1591, complete genome4e-28135BLASTN svgBLASTP svg
NC_012917:985617985617100580620190Pectobacterium carotovorum subsp. carotovorum PC1, complete genome1e-21113BLASTN svgBLASTP svg
NC_004547:1873390*1873390193737663987Erwinia carotovora subsp. atroseptica SCRI1043, complete genome2e-20109BLASTN svgBLASTP svg
NC_008786:27296352729635277134341709Verminephrobacter eiseniae EF01-2, complete genome9e-20107BLASTN svgBLASTP svg
NC_013421:18190361819036185909940064Pectobacterium wasabiae WPP163, complete genome2e-1799.6BLASTN svgBLASTP svg