Pre_GI: BLASTN Hits

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Query: NC_016844:775334 Treponema pallidum subsp. pallidum DAL-1 chromosome, complete

Start: 775334, End: 798592, Length: 23259

Host Lineage: Treponema pallidum; Treponema; Spirochaetaceae; Spirochaetales; Spirochaetes; Bacteria

General Information: This organism is the causative agent of endemic and venereal syphilis. This sexual transmitted disease was first discovered in Europe at the end of the fifteenth century, however, the causative agent was not identified until 1905. At one time syphilis was the third most commonly reported communicable disease in the USA. Syphilis is characterized by multiple clinical stages and long periods of latent, asymptomatic infection. Although effective therapies have been available since the introduction of penicillin, syphilis remains a global health problem.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_021184:2238500*2238500226036721868Desulfotomaculum gibsoniae DSM 7213, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_010741:775000*77500079478519786Treponema pallidum subsp. pallidum SS14, complete genome022620BLASTN svgBLASTP svg
NC_000919:77378477378479386920086Treponema pallidum subsp. pallidum str. Nichols, complete genome022160BLASTN svgBLASTP svg
NC_015714:768500*76850079153823039Treponema paraluiscuniculi Cuniculi A chromosome, complete genome021880BLASTN svgBLASTP svg