Pre_GI: BLASTP Hits

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Query: NC_016844:547069:548824 Treponema pallidum subsp. pallidum DAL-1 chromosome, complete

Start: 548824, End: 549555, Length: 732

Host Lineage: Treponema pallidum; Treponema; Spirochaetaceae; Spirochaetales; Spirochaetes; Bacteria

General Information: This organism is the causative agent of endemic and venereal syphilis. This sexual transmitted disease was first discovered in Europe at the end of the fifteenth century, however, the causative agent was not identified until 1905. At one time syphilis was the third most commonly reported communicable disease in the USA. Syphilis is characterized by multiple clinical stages and long periods of latent, asymptomatic infection. Although effective therapies have been available since the introduction of penicillin, syphilis remains a global health problem.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017268:546376:548131548131548862732Treponema pallidum subsp. pallidum str. Chicago chromosome,transcription factor1e-125448
NC_016848:547115:548870548870549601732Treponema pallidum subsp. pertenue str. CDC2 chromosome, completeCarD family transcriptional regulator1e-125448
NC_016843:547149:548904548904549635732Treponema pallidum subsp. pertenue str. Gauthier chromosome,CarD family transcriptional regulator1e-125448
NC_016842:546661:548416548416549147732Treponema pallidum subsp. pertenue str. SamoaD chromosome, completeCarD family transcriptional regulator1e-125448
NC_021508:546592:548452548452549078627Treponema pallidum subsp. pallidum SS14, complete genomeCarD family transcriptional regulator2e-112404
NC_000919:545141:547001547001547627627Treponema pallidum subsp. pallidum str. Nichols, complete genometranscription factor (carD)2e-112404
NC_010741:546573:548433548433549059627Treponema pallidum subsp. pallidum SS14, complete genometranscription factor2e-112404
NC_015714:542679:544625544625545164540Treponema paraluiscuniculi Cuniculi A chromosome, complete genomeCarD family transcriptional regulator3e-92337
NC_016633:1353458:135681513568151357318504Sphaerochaeta pleomorpha str. Grapes chromosome, complete genomeCarD-like transcriptional regulator6e-39160
NC_017243:3093393:311049131104913111066576Brachyspira intermedia PWS/A chromosome, complete genomeCarD family transcriptional regulator2e-1789.7
NC_011899:86800:109298109298109828531Halothermothrix orenii H 168, complete genometranscriptional regulator, CarD family6e-1787.8
NC_019903:421000:433111433111433587477Desulfitobacterium dichloroeliminans LMG P-21439 chromosome,CarD-like transcriptional regulator2e-1685.9
NC_017200:4520482:452229045222904522769480Bacillus thuringiensis serovar finitimus YBT-020 chromosome,transcriptional regulator, CarD family protein3e-1272.4
NC_003909:4484278:448786944878694488363495Bacillus cereus ATCC 10987, complete genometranscriptional regulator, CarD family3e-1272
NC_011658:4492356:449415044941504494644495Bacillus cereus AH187 chromosome, complete genomeCarD family transcriptional regulator3e-1272
NC_016771:4445815:444793344479334448427495Bacillus cereus NC7401, complete genomeCarD family transcriptional regulator3e-1272
NC_009725:496443:522288522288522749462Bacillus amyloliquefaciens FZB42, complete genomeYdeB3e-1272
NC_019842:484933:516277516277516753477Bacillus amyloliquefaciens subsp. plantarum AS43.3 chromosome,hypothetical protein4e-1271.6
NC_004722:4645678:464926446492644649758495Bacillus cereus ATCC 14579, complete genomeCarD-like transcriptional regulator7e-1271.2
NC_014171:4560061:456364145636414564135495Bacillus thuringiensis BMB171 chromosome, complete genomeCarD family transcriptional regulator6e-1271.2
NC_007503:2098980:210009121000912100573483Carboxydothermus hydrogenoformans Z-2901, complete genometranscriptional regulator, CarD family6e-1271.2
NC_020410:495184:513712513712514173462Bacillus amyloliquefaciens subsp. plantarum UCMB5036 completeputative transcriptional regulator6e-1271.2
NC_014335:4442500:444362444436244444103480Bacillus cereus biovar anthracis str. CI chromosome, completeCarD-like transcriptional regulator1e-1170.1
NC_000964:521975:559695559695560156462Bacillus subtilis subsp. subtilis str. 168, complete genomehypothetical protein2e-1169.7
NC_005957:4502733:450485045048504505344495Bacillus thuringiensis serovar konkukian str. 97-27, completetranscriptional regulator, CarD family2e-1169.7
NC_012472:4515909:451770345177034518197495Bacillus cereus 03BB102, complete genometranscriptional regulator, CarD family2e-1169.7
NC_008600:4509793:451158745115874512081495Bacillus thuringiensis str. Al Hakam, complete genometranscriptional regulator, CarD family2e-1169.7
NC_011773:4569600:457315845731584573652495Bacillus cereus AH820 chromosome, complete genomeCarD family transcriptional regulator2e-1169.7
NC_016779:4475425:447721944772194477713495Bacillus cereus F837/76 chromosome, complete genomeTranscriptional regulator CarD-like protein2e-1169.7
NC_010184:4532262:453440445344044534883480Bacillus weihenstephanensis KBAB4, complete genometranscriptional regulator, CarD family2e-1169.7
NC_006274:4563455:456524945652494565743495Bacillus cereus E33L, complete genometranscriptional regulator, CarD family2e-1169.7
NC_011969:4432454:443245444324544432948495Bacillus cereus Q1 chromosome, complete genomeCarD family transcriptional regulator2e-1169.7
NC_017195:517344:535215535215535691477Bacillus subtilis subsp. subtilis str. RO-NN-1 chromosome, completetranscriptional regulator, CarD family3e-1169.3
NC_011772:4638000:463925546392554639749495Bacillus cereus G9842, complete genometranscriptional regulator, CarD family2e-1169.3
UCMB5137:1:162491624916725477Bacillus atrophaeus UCMB-5137putative transcriptional regulator2e-1169.3
NC_017208:4692478:469426846942684694762495Bacillus thuringiensis serovar chinensis CT-43 chromosome, completeCarD family transcriptional regulator2e-1169.3
NC_019896:3491000:349933934993393499815477Bacillus subtilis subsp. subtilis str. BSP1 chromosome, completehypothetical protein3e-1168.9
NC_014976:2735423:274887427488742749350477Bacillus subtilis BSn5 chromosome, complete genomeputative transcriptional regulator3e-1168.9
CP002207:1:244972449724958462Bacillus atrophaeus 1942, complete genomeputative transcriptional regulator4e-1168.6
NC_014639:1:244972449724958462Bacillus atrophaeus 1942 chromosome, complete genometranscriptional regulator4e-1168.6
NC_003997:4507939:450974745097474510193447Bacillus anthracis str. Ames, complete genometranscriptional regulator, CarD family4e-1168.6
NC_007530:4507742:450987445098744510320447Bacillus anthracis str. 'Ames Ancestor', complete genometranscriptional regulator, card family4e-1168.6
NC_020244:516993:538627538627539103477Bacillus subtilis XF-1, complete genomehypothetical protein4e-1168.6
NC_011725:4671432:467354846735484674042495Bacillus cereus B4264 chromosome, complete genomeCarD family transcriptional regulator3e-1168.6
NC_012659:4507966:450975945097594510220462Bacillus anthracis str. A0248, complete genome4e-1168.2
NC_012581:4509491:451128445112844511745462Bacillus anthracis str. CDC 684 chromosome, complete genomeCarD family transcriptional regulator4e-1168.2
NC_005945:4508304:451042145104214510882462Bacillus anthracis str. Sterne, complete genometranscriptional regulator, CarD family4e-1168.2
NC_014378:131810:151506151506152015510Acetohalobium arabaticum DSM 5501 chromosome, complete genometranscriptional regulator, CarD family1e-1066.6
NC_016779:3418538:342188334218833422359477Bacillus cereus F837/76 chromosome, complete genomeTranscriptional regulator CarD-like protein6e-1064.7
NC_014479:509919:527632527632528108477Bacillus subtilis subsp. spizizenii str. W23 chromosome, completeputative transcriptional regulator1e-0963.5
NC_006582:883922:902498902498902959462Bacillus clausii KSM-K16, complete genometranscriptional regulator, CarD family8e-0857.4
NC_016629:2971860:297685329768532977437585Desulfovibrio africanus str. Walvis Bay chromosome, completeCarD family transcriptional regulator9e-0857.4
NC_008783:119758:137770137770138348579Bartonella bacilliformis KC583, complete genometranscriptional regulator, CarD family8e-0650.8