Pre_GI: BLASTN Hits

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Query: NC_016843:1 Treponema pallidum subsp. pertenue str. Gauthier chromosome,

Start: 1, End: 32936, Length: 32936

Host Lineage: Treponema pallidum; Treponema; Spirochaetaceae; Spirochaetales; Spirochaetes; Bacteria

General Information: This strain was isolated in Brazzaville, the Republic of Congo in 1960. Treponema pallidum subsp. pertenue causes chronic and disfiguring illness called yaws. The disease starts as a skin infection causing persistent ulcers and progresses to form tumor-like masses. This disease tends to infect children and is common in rural areas in Africa, Southeast Asia and equatorial South America.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_014933:2240000*2240000226386823869Bacteroides helcogenes P 36-108 chromosome, complete genome2e-0869.9BLASTN svgBLASTP svg
NC_020134:20500020500022458619587Clostridium stercorarium subsp. stercorarium DSM 8532, complete4e-0971.9BLASTN svgBLASTP svg
NC_008536:3988520*3988520401059022071Solibacter usitatus Ellin6076, complete genome4e-0661.9BLASTN svgBLASTP svg
NC_013730:3208571*3208571324592137351Spirosoma linguale DSM 74, complete genome4e-0661.9BLASTN svgBLASTP svg
NC_013921:36000*360005820522206Thermoanaerobacter italicus Ab9 chromosome, complete genome3e-1075.8BLASTN svgBLASTP svg
NC_014209:81643*8164312009938457Thermoanaerobacter mathranii subsp. mathranii str. A3 chromosome,1e-1283.8BLASTN svgBLASTP svg
NC_014538:33718*337185528221565Thermoanaerobacter sp. X513 chromosome, complete genome2e-1489.7BLASTN svgBLASTP svg
NC_003869:45560*455606745221893Thermoanaerobacter tengcongensis MB4, complete genome7e-1797.6BLASTN svgBLASTP svg
NC_019970:35985359857648740503Thermoanaerobacterium thermosaccharolyticum M0795, complete genome2e-0869.9BLASTN svgBLASTP svg
NC_015555:49842*498429077940938Thermoanaerobacterium xylanolyticum LX-11 chromosome, complete2e-0869.9BLASTN svgBLASTP svg
NC_019897:3025871*3025871304870622836Thermobacillus composti KWC4 chromosome, complete genome1e-0663.9BLASTN svgBLASTP svg
NC_011296:102650*10265012914226493Thermodesulfovibrio yellowstonii DSM 11347, complete genome2e-0869.9BLASTN svgBLASTP svg
NC_004113:1234048*1234048126028626239Thermosynechococcus elongatus BP-1, complete genome4e-0661.9BLASTN svgBLASTP svg
NC_010741:12542*125423292520384Treponema pallidum subsp. pallidum SS14, complete genome039620BLASTN svgBLASTP svg
NC_000919:12545*125453292820384Treponema pallidum subsp. pallidum str. Nichols, complete genome039600BLASTN svgBLASTP svg
NC_015714:1*11836418364Treponema paraluiscuniculi Cuniculi A chromosome, complete genome015510BLASTN svgBLASTP svg
NC_008150:84472784472789009945373Yersinia pestis Antiqua, complete genome1e-0663.9BLASTN svgBLASTP svg
NC_003143:16300001630000167609946100Yersinia pestis CO92, complete genome1e-0663.9BLASTN svgBLASTP svg
NC_008149:28023922802392285367651285Yersinia pestis Nepal516, complete genome1e-0663.9BLASTN svgBLASTP svg
NC_006155:17560001756000179467638677Yersinia pseudotuberculosis IP 32953, complete genome1e-0663.9BLASTN svgBLASTP svg
NC_010634:17555481755548179542439877Yersinia pseudotuberculosis PB1/+, complete genome1e-0663.9BLASTN svgBLASTP svg