Pre_GI: BLASTP Hits

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Query: NC_016843:547149:563745 Treponema pallidum subsp. pertenue str. Gauthier chromosome,

Start: 563745, End: 565016, Length: 1272

Host Lineage: Treponema pallidum; Treponema; Spirochaetaceae; Spirochaetales; Spirochaetes; Bacteria

General Information: This strain was isolated in Brazzaville, the Republic of Congo in 1960. Treponema pallidum subsp. pertenue causes chronic and disfiguring illness called yaws. The disease starts as a skin infection causing persistent ulcers and progresses to form tumor-like masses. This disease tends to infect children and is common in rural areas in Africa, Southeast Asia and equatorial South America.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016848:547115:5637115637115649821272Treponema pallidum subsp. pertenue str. CDC2 chromosome, completeDNA-directed DNA polymerase III gamma and tau subunits0874
NC_016842:546661:5632575632575645281272Treponema pallidum subsp. pertenue str. SamoaD chromosome, completeDNA-directed DNA polymerase III gamma and tau subunits0874
NC_021508:546592:5631885631885644591272Treponema pallidum subsp. pallidum SS14, complete genomeDNA-directed DNA polymerase III gamma and tau subunits0872
NC_017268:546376:5629725629725642431272Treponema pallidum subsp. pallidum str. Chicago chromosome,DNA polymerase III domain-containing protein0872
NC_016844:547069:5636655636655649361272Treponema pallidum subsp. pallidum DAL-1 chromosome, completeDNA-directed DNA polymerase III gamma and tau subunits0872
NC_010741:546573:5631685631685644391272Treponema pallidum subsp. pallidum SS14, complete genomepossible DNA polymerase III, gamma and tau subunits0872
NC_000919:545141:5617365617365630071272Treponema pallidum subsp. pallidum str. Nichols, complete genomeDNA polymerase III, gamma and tau subunits, putative0872
NC_015714:542679:5592815592815605521272Treponema paraluiscuniculi Cuniculi A chromosome, complete genomeDNA-directed DNA polymerase III subunits gamma and tau0868
NC_014933:270000:2855972855972874321836Bacteroides helcogenes P 36-108 chromosome, complete genomeDNA polymerase III, tau subunit3e-1377
NC_015496:3256372:3256372325637232582761905Krokinobacter diaphorus 4H-3-7-5 chromosome, complete genomeDNA polymerase III, subunits gamma and tau6e-1272.4
NC_013123:78786:9316193161942041044Candidatus Sulcia muelleri SMDSEM, complete genomeN terminal region of DNA polymerase III, gamma subunit9e-1272
NC_014499:87528:9889898898999411044Candidatus Sulcia muelleri CARI chromosome, complete genomeDNA polymerase III subunit gamma2e-1170.9
NC_010381:35408:455394553946411873Lysinibacillus sphaericus C3-41 plasmid pBsph, complete sequenceDNA polymerase III subunit delta'3e-1170.1
NC_010830:384812:3865683865683884571890Candidatus Amoebophilus asiaticus 5a2, complete genomehypothetical protein2e-1067.4
NC_017243:3141500:3143225314322531448021578Brachyspira intermedia PWS/A chromosome, complete genomeDNA polymerase III subunits gamma and tau3e-1066.6
NC_013316:1:2023020230218671638Clostridium difficile R20291, complete genomeDNA polymerase III subunit gamma/tau3e-1066.6
NC_012225:2198987:2213988221398822155711584Brachyspira hyodysenteriae WA1, complete genomeDNA polymerase III, gamma and tau subunits3e-1066.6
NC_009089:1:2047020470221071638Clostridium difficile 630, complete genomeDNA polymerase III subunit gamma/tau3e-1066.6
NC_018604:2579000:2579067257906725806321566Brachyspira pilosicoli WesB complete genomeDNA polymerase III subunits gamma and tau1e-0965.1
NC_014330:1113145:1113854111385411154191566Brachyspira pilosicoli 95/1000 chromosome, complete genomeDNA polymerase III subunits gamma and tau1e-0965.1
NC_019908:2068631:2101961210196121035261566Brachyspira pilosicoli P43/6/78 chromosome, complete genomeDNA polymerase III subunits gamma and tau1e-0965.1
NC_010418:138325:1383251383251397401416Clostridium botulinum A3 str. Loch Maree plasmid pCLK, completeDNA polymerase III, subunits gamma and tau3e-0963.5
NC_012654:92487:9575695756971741419Clostridium botulinum Ba4 str. 657 plasmid pCLJ, complete sequenceDNA polymerase III, subunits gamma and tau3e-0963.5
NC_010379:6880:8417841798351419Clostridium botulinum B1 str. Okra plasmid pCLD, complete sequenceDNA polymerase III, subunits gamma and tau4e-0963.2
NC_010381:35408:4359843598455081911Lysinibacillus sphaericus C3-41 plasmid pBsph, complete sequenceDNA polymerase III subunit gamma/tau7e-0962.4
NC_002952:494500:5105575105575122541698Staphylococcus aureus subsp. aureus MRSA252, complete genomeDNA polymerase III, tau subunit7e-0962.4
NC_013450:448054:4637154637154654121698Staphylococcus aureus subsp. aureus ED98, complete genomeDNA polymerase III, gamma and tau subunits7e-0962.4
NC_017337:498688:5143495143495160461698Staphylococcus aureus subsp. aureus ED133 chromosome, completeDNA polymerase III subunits gamma and tau7e-0962.4
NC_017338:470993:4860024860024876991698Staphylococcus aureus subsp. aureus JKD6159 chromosome, completeDNA-directed DNA polymerase III subunit gamma and tau7e-0962.4
NC_002745:487500:5025945025945042911698Staphylococcus aureus subsp. aureus N315, complete genomeDNA polymerase III gamma and tau subunits7e-0962.4
NC_002758:511247:5269085269085286051698Staphylococcus aureus subsp. aureus Mu50, complete genomeDNA polymerase III gamma and tau subunits7e-0962.4
NC_009487:522193:5378545378545395511698Staphylococcus aureus subsp. aureus JH9 chromosome, completeDNA polymerase III subunits gamma and tau7e-0962.4
NC_009632:522264:5379255379255396221698Staphylococcus aureus subsp. aureus JH1 chromosome, completeDNA polymerase III subunits gamma and tau7e-0962.4
NC_012121:113912:1184171184171201681752Staphylococcus carnosus subsp. carnosus TM300, complete genomeDNA polymerase III gamma and tau subunits9e-0962
NC_003923:473743:4879734879734896701698Staphylococcus aureus subsp. aureus MW2, complete genomeDNA polymerase III gamma and tau subunits1e-0861.2
NC_017079:2243451:2246343224634322480161674Caldilinea aerophila DSM 14535 = NBRC 104270, complete genomeDNA polymerase III subunit gamma and tau2e-0860.8
NC_021182:93000:9652896528981561629Clostridium pasteurianum BC1, complete genomeDNA polymerase III, subunit gamma/tau3e-0860.5
NC_013949:1163456:1181764118176411835211758Helicobacter mustelae 12198 chromosome, complete genomeDNA polymerase III subunit gamma3e-0860.5
NC_017208:1:2539825398270861689Bacillus thuringiensis serovar chinensis CT-43 chromosome, completeDNA polymerase III subunits gamma and tau2e-0860.5
NC_019978:39000:4065540655423311677Halobacteroides halobius DSM 5150, complete genomeDNA polymerase III, subunit gamma/tau2e-0860.5
NC_014171:1:2570125701273081608Bacillus thuringiensis BMB171 chromosome, complete genomeDNA polymerase III subunits gamma and tau2e-0860.5
NC_014314:576465:6644416644416654601020Dehalogenimonas lykanthroporepellens BL-DC-9 chromosome, completeDNA-directed DNA polymerase subunit delta'3e-0860.1
NC_009699:33452:3345233452350771626Clostridium botulinum F str. Langeland chromosome, complete genomeDNA polymerase III subunits gamma and tau3e-0860.1
NC_017297:33519:3351933519351441626Clostridium botulinum F str. 230613 chromosome, complete genomeDNA polymerase III subunits gamma/tau3e-0860.1
NC_009495:38000:3809538095397201626Clostridium botulinum A str. ATCC 3502 chromosome, complete genomeDNA polymerase III subunits gamma and tau3e-0860.1
NC_009697:38000:3811038110397351626Clostridium botulinum A str. ATCC 19397 chromosome, completeDNA polymerase III subunits gamma and tau3e-0860.1
NC_009698:38000:3811038110397351626Clostridium botulinum A str. Hall chromosome, complete genomeDNA polymerase III subunits gamma and tau3e-0860.1
NC_008346:36176:3617636176376751500Syntrophomonas wolfei subsp. wolfei str. Goettingen, completeDNA-directed DNA polymerase3e-0860.1
NC_014219:25845:3195931959337611803Bacillus selenitireducens MLS10 chromosome, complete genomeDNA polymerase III, subunits gamma and tau5e-0859.3
NC_018748:1400068:1406261140626114073611101Emticicia oligotrophica DSM 17448 chromosome, complete genomeDNA polymerase III gamma/tau subunits-like protein5e-0859.3
NC_014387:281157:2842162842162858171602Butyrivibrio proteoclasticus B316 chromosome 1, complete genomeDNA polymerase III gamma and tau subunits DnaX19e-0858.5
NC_014355:243543:2472142472142490911878Candidatus Nitrospira defluvii, complete genomeDNA polymerase III subunit gamma/tau1e-0758.2
NC_007776:1340741:1366407136640713687462340Synechococcus sp. JA-2-3B'a(2-13), complete genomeDNA polymerase III, subunits gamma and tau2e-0757.8
NC_017075:2733898:2750746275074627517651020Rubrivivax gelatinosus IL144, complete genomeDNA polymerase III delta' subunit HolB2e-0757.4
NC_014721:508000:5149125149125165161605Caldicellulosiruptor kristjanssonii 177R1B chromosome, completeDNA polymerase iii, subunits gamma and tau2e-0757
NC_015949:1957185:1972051197205119736611611Caldicellulosiruptor lactoaceticus 6A chromosome, complete genomeDNA polymerase III subunits gamma and tau2e-0757
NC_015737:981712:9965819965819981611581Clostridium sp. SY8519, complete genomehypothetical protein2e-0757
NC_014376:189319:1893191893191909141596Clostridium saccharolyticum WM1 chromosome, complete genomeDNA polymerase III, subunits gamma and tau2e-0757
NC_010321:2207364:220972322097232210697975Thermoanaerobacter pseudethanolicus ATCC 33223 chromosome, completeDNA polymerase III subunit delta'4e-0756.6
NC_016893:218376:2227162227162238071092Wigglesworthia glossinidia endosymbiont of Glossina morsitansDNA polymerase III subunits gamma and tau3e-0756.6
NC_013520:1860286:1866713186671318694002688Veillonella parvula DSM 2008, complete genomeDNA polymerase III, subunits gamma and tau4e-0756.2
NC_011025:134292:1514611514611534041944Mycoplasma arthritidis 158L3-1, complete genomeDNA polymerase III subunits gamma and tau4e-0756.2
NC_015555:49842:898208982090779960Thermoanaerobacterium xylanolyticum LX-11 chromosome, completeDNA polymerase III, delta prime subunit5e-0755.8
NC_015555:49842:5411154111557031593Thermoanaerobacterium xylanolyticum LX-11 chromosome, completeDNA polymerase III, subunits gamma and tau7e-0755.5
NC_006055:769418:7876507876507895451896Mesoplasma florum L1, complete genomeDNA polymerase III gamma and tau subunits7e-0755.5
NC_012988:2455807:2456221245622124581011881Methylobacterium extorquens DM4, complete genomeDNA polymerase III, tau and subunit gammas8e-0755.5
NC_008536:3988520:4008884400888440105901707Solibacter usitatus Ellin6076, complete genomeDNA polymerase III, subunits gamma and tau1e-0655.1
NC_013939:148706:1487061487061502861581Deferribacter desulfuricans SSM1, complete genomeDNA polymerase III gamma/tau subunits1e-0655.1
NC_006177:12383:1624916249179611713Symbiobacterium thermophilum IAM 14863, complete genomeDNA polymerase III gamma and tau subunits1e-0655.1
NC_011567:1:2557225572272511680Anoxybacillus flavithermus WK1, complete genomeDNA polymerase III tau subunit9e-0755.1
NC_010172:2082000:2082448208244820843341887Methylobacterium extorquens PA1, complete genomeDNA polymerase III, subunits gamma and tau9e-0755.1
NC_014654:391201:3963813963813981891809Halanaerobium sp. 'sapolanicus' chromosome, complete genomeDNA polymerase III, subunits gamma and tau1e-0654.7
NC_010424:14657:3914239142404851344Candidatus Desulforudis audaxviator MP104C, complete genomeDNA polymerase III, subunits gamma and tau2e-0654.3
NC_009437:1481064:1487849148784914894561608Caldicellulosiruptor saccharolyticus DSM 8903, complete genomeDNA polymerase III, subunits gamma and tau2e-0654.3
NC_006177:3457637:347597534759753476973999Symbiobacterium thermophilum IAM 14863, complete genomeDNA polymerase III delta' subunit2e-0654.3
NC_014752:1363562:1372436137243613745682133Neisseria lactamica ST-640, complete genomeDNA polymerase III tau and gamma chains2e-0653.9
NC_013119:942079:9612999612999623811083Brucella microti CCM 4915 chromosome 1, complete sequenceDNA polymerase III subunit delta'3e-0653.5
NC_012441:956609:9758299758299769111083Brucella melitensis ATCC 23457 chromosome I, complete sequenceDNA polymerase III subunit delta'3e-0653.5
NC_010169:957565:9767859767859778671083Brucella suis ATCC 23445 chromosome I, complete sequenceDNA polymerase III, delta' subunit3e-0653.5
NC_003317:1030220:1030220103022010313021083Brucella melitensis 16M chromosome I, complete sequenceDNA polymerase III subunit delta3e-0653.5
NC_015857:963570:9827899827899838711083Brucella pinnipedialis B2/94 chromosome chromosome 1, completeDNA polymerase III subunit delta'3e-0653.5
NC_010103:936250:9554719554719565531083Brucella canis ATCC 23365 chromosome I, complete sequenceDNA polymerase III, delta' subunit3e-0653.5
NC_004310:937800:9570219570219581031083Brucella suis 1330 chromosome I, complete sequenceDNA polymerase III subunit delta3e-0653.5
NC_016778:96792:9679296792978741083Brucella canis HSK A52141 chromosome 1, complete sequenceDNA polymerase III subunit delta'3e-0653.5
NC_016797:937753:9569749569749580561083Brucella suis VBI22 chromosome I, complete sequenceDNA polymerase III subunit delta'3e-0653.5
NC_017244:956554:9757859757859768671083Brucella melitensis M28 chromosome chromosome 1, complete sequenceDNA polymerase III subunit delta'3e-0653.5
NC_007503:2338110:2373573237357323751081536Carboxydothermus hydrogenoformans Z-2901, complete genomeputative DNA polymerase III, gamma/tau subunits3e-0653.5
NC_012039:412837:4470934470934486251533Campylobacter lari RM2100, complete genomeDNA polymerase III, gamma and tau subunits3e-0653.5
NC_015738:873653:8863658863658886412277Eggerthella sp. YY7918, complete genomeDNA polymerase III3e-0653.5
NC_009925:2264858:2287901228790122899672067Acaryochloris marina MBIC11017, complete genomeDNA polymerase III gamma and tau subunits3e-0653.5
NC_017251:937786:9570079570079580891083Brucella suis 1330 chromosome I, complete genomeDNA polymerase III subunit delta'3e-0653.5
NC_017248:953131:9722189722189733001083Brucella melitensis NI chromosome chromosome I, complete sequenceDNA polymerase III subunit delta'3e-0653.5
NC_017246:956868:9760989760989771801083Brucella melitensis M5-90 chromosome chromosome I, completeDNA polymerase III subunit delta'3e-0653.5
NC_017167:129988:1318871318871336441758Alicyclobacillus acidocaldarius subsp. acidocaldarius Tc-4-1DNA polymerase III subunits gamma and tau4e-0653.1
NC_014171:1:369183691837901984Bacillus thuringiensis BMB171 chromosome, complete genomeDNA polymerase III subunit delta'4e-0653.1
NC_007618:955000:9731419731419742231083Brucella melitensis biovar Abortus 2308 chromosome I, completeReplication factor C conserved domain3e-0653.1
NC_010742:955104:9743209743209754021083Brucella abortus S19 chromosome 1, complete sequenceReplication factor C conserved domain protein3e-0653.1
NC_006932:956805:9760219760219771031083Brucella abortus biovar 1 str. 9-941 chromosome I, completeDNA polymerase III subunit delta3e-0653.1
NC_016795:1441024:1441024144102414421061083Brucella abortus A13334 chromosome 1, complete sequenceDNA polymerase III subunit delta3e-0653.1
NC_013921:36000:4033940339418861548Thermoanaerobacter italicus Ab9 chromosome, complete genomeDNA polymerase III, subunits gamma and tau9e-0652
NC_014831:65408:6685766857693342478Thermaerobacter marianensis DSM 12885 chromosome, complete genomeDNA polymerase III, subunits gamma and tau1e-0551.6