Pre_GI: BLASTP Hits

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Query: NC_016842:775368:789005 Treponema pallidum subsp. pertenue str. SamoaD chromosome, complete

Start: 789005, End: 790051, Length: 1047

Host Lineage: Treponema pallidum; Treponema; Spirochaetaceae; Spirochaetales; Spirochaetes; Bacteria

General Information: This strain was isolated in Western Samoa in 1953. Treponema pallidum subsp. pertenue causes the chronic and disfiguring illness called yaws. The disease starts as a skin infection causing persistent ulcers and progresses to form tumor-like masses. This disease tends to infect children and is common in rural areas in Africa, Southeast Asia and equatorial South America.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_021508:775264:7889017889017899471047Treponema pallidum subsp. pallidum SS14, complete genomebifunctional chemotaxis protein CheC/flagellar motor switch protein FliY0652
NC_015714:768500:7823037823037833491047Treponema paraluiscuniculi Cuniculi A chromosome, complete genomebifunctional chemotaxis protein CheC/flagellar motor switch protein FliY0650
NC_016844:775334:7893597893597904051047Treponema pallidum subsp. pallidum DAL-1 chromosome, completebifunctional chemotaxis protein CheC/flagellar motor switch protein FliY0651
NC_000919:773784:7874217874217884671047Treponema pallidum subsp. pallidum str. Nichols, complete genomeflagellar motor switch protein (fliY)0652
NC_010741:775000:7888697888697899151047Treponema pallidum subsp. pallidum SS14, complete genomeflagellar motor switch protein0652
NC_016843:775371:7891927891927902381047Treponema pallidum subsp. pertenue str. Gauthier chromosome,bifunctional chemotaxis protein CheC/flagellar motor switch protein FliY0652
NC_016848:775822:7894597894597905051047Treponema pallidum subsp. pertenue str. CDC2 chromosome, completebifunctional chemotaxis protein CheC/flagellar motor switch protein FliY0652
NC_017268:775000:7886717886717897171047Treponema pallidum subsp. pallidum str. Chicago chromosome,flagellar motor switch protein0652
NC_018604:492068:4964124964124974581047Brachyspira pilosicoli WesB complete genomeflagellar motor switch protein FliN2e-42173
NC_018607:2375344:2388581238858123896271047Brachyspira pilosicoli B2904 chromosome, complete genomeflagellar motor switch protein FliN3e-42172
NC_019908:1467000:1480929148092914819751047Brachyspira pilosicoli P43/6/78 chromosome, complete genomeflagellar motor switch protein FliN3e-42172
NC_014330:1784515:1788618178861817896641047Brachyspira pilosicoli 95/1000 chromosome, complete genomeflagellar motor switch protein FliN4e-42172
NC_017243:491681:5083175083175093991083Brachyspira intermedia PWS/A chromosome, complete genomeflagellar motor switch protein6e-40164
NC_012225:1575432:1600390160039016014721083Brachyspira hyodysenteriae WA1, complete genomeflagellar motor switch protein1e-39164
NC_017295:2286911:2305431230543123066181188Clostridium acetobutylicum EA 2018 chromosome, complete genomeflagellar motor switch protein3e-29129
NC_008710:277207:291605291605291949345Borrelia turicatae 91E135, complete genomeflagellar motor switch protein FliN1e-27124
NC_010673:291679:292313292313292657345Borrelia hermsii DAH, complete genomeflagellar motor switch protein FliN2e-27123
NC_009012:574145:5920165920165932361221Clostridium thermocellum ATCC 27405, complete genomeCheC, inhibitor of MCP methylation2e-27123
NC_012563:3090954:3107671310767131088311161Clostridium botulinum A2 str. Kyoto, complete genomeflagellar motor switch protein FliN3e-27122
NC_009495:2876865:2893582289358228947421161Clostridium botulinum A str. ATCC 3502 chromosome, complete genomeflagellar motor switch protein3e-27122
NC_009697:2790277:2806994280699428081541161Clostridium botulinum A str. ATCC 19397 chromosome, completeflagellar motor switch protein3e-27122
NC_009698:2727203:2743920274392027450801161Clostridium botulinum A str. Hall chromosome, complete genomeflagellar motor switch protein3e-27122
NC_010520:2937981:2953084295308429542441161Clostridium botulinum A3 str. Loch Maree, complete genomeflagellar motor switch protein FliN4e-27122
NC_009699:2901497:2917261291726129184211161Clostridium botulinum F str. Langeland chromosome, complete genomeflagellar motor switch protein5e-27122
NC_017297:2905138:2917398291739829185581161Clostridium botulinum F str. 230613 chromosome, complete genomeflagellar motor switch protein FliN5e-27122
NC_012658:2930244:2945156294515629463161161Clostridium botulinum Ba4 str. 657 chromosome, complete genomeflagellar motor switch protein6e-27121
NC_010516:2900057:2912728291272829138881161Clostridium botulinum B1 str. Okra, complete genomeflagellar motor switch protein FliN9e-27121
NC_014652:628435:6479166479166490461131Caldicellulosiruptor hydrothermalis 108 chromosome, completechec, inhibitor of mcp methylation / flin fusion protein1e-26120
NC_006156:271410:288358288358288699342Borrelia garinii PBi chromosome linear, complete sequenceflagellar motor switch protein1e-26120
NC_009633:2725128:2725128272512827263091182Alkaliphilus metalliredigens QYMF chromosome, complete genomeflagellar motor switch protein2e-26120
NC_008277:272741:288467288467288808342Borrelia afzelii PKo, complete genomeflagellar motor switch protein2e-26120
NC_017238:272980:288706288706289047342Borrelia afzelii PKo chromosome, complete genomeflagellar motor switch protein FliN2e-26120
NC_011728:269853:288944288944289285342Borrelia burgdorferi ZS7, complete genomeflagellar switch protein FliY3e-26119
NC_001318:270488:289576289576289917342Borrelia burgdorferi B31, complete genomeflagellar motor switch protein (fliN)3e-26119
NC_015921:272517:288141288141288482342Borrelia bissettii DN127 chromosome, complete genomeflagellar motor switch protein FliN6e-26118
NC_015425:1207314:1211758121175812130111254Clostridium botulinum BKT015925 chromosome, complete genomeflagellar motor switch protein FliN5e-25115
NC_018664:1663324:1671062167106216722071146Clostridium acidurici 9a chromosome, complete genomeflagellar motor switch phosphatase FliY6e-25115
NC_021182:2921000:2936970293697029381181149Clostridium pasteurianum BC1, complete genomeflagellar motor switch protein FliN1e-24114
NC_015391:2099472:2099472209947221005511080Carnobacterium sp. 17-4 chromosome, complete genomeflagellar motor switching and energizing phosphatase1e-24114
NC_019978:625476:6441576441576452901134Halobacteroides halobius DSM 5150, complete genomeflagellar motor switch protein FliN1e-24114
NC_004557:1826977:1838003183800318392531251Clostridium tetani E88, complete genomeflagellar motor switch protein6e-24111
NC_014150:2201251:221656222165622216894333Brachyspira murdochii DSM 12563 chromosome, complete genome8e-24111
NC_016012:561687:5662645662645673401077Candidatus Arthromitus sp. SFB-rat-Yit, complete genomeflagellar motor switch protein1e-23111
NC_010723:801215:8012158012158023661152Clostridium botulinum E3 str. Alaska E43, complete genomeflagellar motor switch protein FliN4e-23108
NC_015913:624859:6266526266526277281077Candidatus Arthromitus sp. SFB-mouse-Japan, complete genomeflagellar motor switch phosphatase FliY6e-23108
NC_008593:1060548:1080379108037910815691191Clostridium novyi NT, complete genomeflagellar switch protein FliY, contains CheC-like domain2e-22107
NC_020291:4944835:4993760499376049949621203Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genomeflagellar motor switch phosphatase FliY2e-22106
NC_012225:1575432:159993915999391600193255Brachyspira hyodysenteriae WA1, complete genomeflagellar motor switch protein5e-22105
NC_014328:1046958:1058621105862110598261206Clostridium ljungdahlii ATCC 49587 chromosome, complete genomeputative flagellar motor switch protein7e-22105
NC_009617:4946000:4955939495593949571351197Clostridium beijerinckii NCIMB 8052 chromosome, complete genomeflagellar motor switch protein1e-21104
NC_014837:2586870:261088226108822611292411Pantoea sp. At-9b chromosome, complete genomeflagellar motor switch protein FliN2e-21103
NC_014562:1844268:187369818736981874105408Pantoea vagans C9-1 chromosome, complete genomeFlagellar motor switch protein fliN5e-21102
NC_007759:1356439:135643913564391356930492Syntrophus aciditrophicus SB, complete genomeflagellar motor switch protein7e-21101
NC_016751:1979201:1993227199322719946031377Marinitoga piezophila KA3 chromosome, complete genomeflagellar motor switch protein FliN1e-20101
NC_009664:533021:539118539118539867750Kineococcus radiotolerans SRS30216, complete genomeflagellar motor switch protein FliN2e-20100
NC_012880:1765920:183055418305541830964411Dickeya dadantii Ech703, complete genomeflagellar motor switch protein FliN3e-2099.4
NC_007519:3527207:354353235435323544059528Desulfovibrio alaskensis G20 chromosome, complete genomesurface presentation of antigens (SPOA) protein3e-2099.8
NC_021184:2238500:2244250224425022456381389Desulfotomaculum gibsoniae DSM 7213, complete genomeflagellar motor switch protein FliN3e-2099.8
NC_007912:2768363:276796327679632768370408Saccharophagus degradans 2-40, complete genomesurface presentation of antigens (SpoA) protein4e-2099
NC_013851:3300278:331189933118993312345447Allochromatium vinosum DSM 180 chromosome, complete genomeflagellar motor switch protein FliN1e-1997.4
NC_014500:3023762:306009530600953060511417Dickeya dadantii 3937 chromosome, complete genomeflagellar motor switch protein fliN3e-1996.3
NC_016893:43234:584315843158850420Wigglesworthia glossinidia endosymbiont of Glossina morsitansflagellar motor switching and energizing component3e-1996.3
NC_009512:1691930:169493816949381695402465Pseudomonas putida F1, complete genomeflagellar motor switch protein FliN1e-1894
NC_017986:4374979:437796943779694378451483Pseudomonas putida ND6 chromosome, complete genomeFliN1e-1894
NC_002947:4931476:494885949488594949344486Pseudomonas putida KT2440, complete genomeflagellar motor switch protein1e-1894.4
NC_014366:1814000:183272818327281833141414Gamma proteobacterium HdN1, complete genomeFlagellar motor switch FliN1e-1894.4
NC_010501:4080937:409817840981784098642465Pseudomonas putida W619, complete genomeflagellar motor switch protein FliN2e-1894
NC_019940:293476:298826298826299197372Thioflavicoccus mobilis 8321 chromosome, complete genomeflagellar motor switch protein FliN2e-1893.6
NC_007492:1735595:173559517355951736053459Pseudomonas fluorescens PfO-1, complete genomeflagellar motor switch protein2e-1893.6
NC_016894:2931213:2937868293786829390011134Acetobacterium woodii DSM 1030 chromosome, complete genomeflagellar motor switch protein FliN3e-1892.8
NC_004129:1848701:185182918518291852290462Pseudomonas fluorescens Pf-5, complete genomeflagellar motor switch protein4e-1892.4
NC_009654:3849774:387831938783193878780462Marinomonas sp. MWYL1, complete genomeflagellar motor switch protein FliN6e-1891.7
NC_013223:685628:705832705832706161330Desulfohalobium retbaense DSM 5692, complete genomeflagellar motor switch protein FliN4e-1789
NC_004344:26828:572215722157628408Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis,hypothetical protein9e-1787.8
NC_008599:1489868:149197814919781492808831Campylobacter fetus subsp. fetus 82-40, complete genomeflagellar motor switch protein8e-1685.1
NC_012440:659646:686871686871687443573Persephonella marina EX-H1, complete genomeflagellar motor switch protein FliN1e-1584.3
NC_008576:4467745:447890444789044479317414Magnetococcus sp. MC-1, complete genomeflagellar motor switch protein FliN2e-1480.1
NC_020911:2921925:294418129441812944477297Octadecabacter antarcticus 307, complete genomeflagellar motor switch protein FliN4e-1479.3
NC_006677:435652:446810446810447127318Gluconobacter oxydans 621H, complete genomeflagellar motor switch protein7e-1271.6
NC_009484:1627734:163713316371331637531399Acidiphilium cryptum JF-5 chromosome, complete genomeflagellar motor switch protein FliN1e-1171.2
NC_015186:1698000:170739517073951707715321Acidiphilium multivorum AIU301, complete genomeflagellar motor switch protein FliN2e-1170.9
NC_014758:1387470:138896413889641389248285Calditerrivibrio nitroreducens DSM 19672 chromosome, completesurface presentation of antigens (spoa) protein8e-1168.2
NC_017187:1832045:183426918342691835135867Arcobacter butzleri ED-1, complete genomeflagellar motor switch protein FliY1e-1067.8
NC_012438:1211940:124043012404301241008579Sulfurihydrogenibium azorense Az-Fu1 chromosome, complete genomeflagellar motor switch protein FliN1e-1067.4
NC_021184:2238500:225945022594502259845396Desulfotomaculum gibsoniae DSM 7213, complete genomeflagellar motor switch/type III secretory pathway protein3e-1066.6
NC_008435:1215437:130955713095571309955399Rhodopseudomonas palustris BisA53, complete genomeflagellar motor switch protein FliN5e-0962.4
NC_009850:1954969:195604519560451956914870Arcobacter butzleri RM4018, complete genomeflagellar motor switch protein FliY8e-0961.6
NC_017192:2469667:246966724696672470548882Arcobacter sp. L, complete genomeflagellar motor switch protein FliY5e-0858.9
NC_011894:6382636:638822663882266388531306Methylobacterium nodulans ORS 2060, complete genomesurface presentation of antigens (SPOA) protein6e-0858.9
NC_013766:757987:765802765802766104303Listeria monocytogenes 08-5578 chromosome, complete genomeflagellar motor switch protein2e-0756.6
NC_013768:721897:732506732506732808303Listeria monocytogenes 08-5923, complete genomeflagellar motor switch protein2e-0756.6
NC_003210:721824:728282728282728581300Listeria monocytogenes EGD-e, complete genomeflagellar motor switch protein2e-0757
NC_002973:730942:742774742774743073300Listeria monocytogenes str. 4b F2365, complete genomeflagellar motor switch protein2e-0757
NC_003212:721112:727569727569727868300Listeria innocua Clip11262, complete genomeflagellar motor switch protein2e-0757
NC_012440:659646:666224666224666463240Persephonella marina EX-H1, complete genomeflagellar motor switch phosphatase FliY3e-0756.2
NC_009253:2615777:261907526190752619461387Desulfotomaculum reducens MI-1 chromosome, complete genomesurface presentation of antigens (SPOA) protein8e-0755.1
NC_016011:678419:681800681800682099300Listeria ivanovii subsp. ivanovii PAM 55, complete genomeputative flagellar motor switch protein fliY C-terminal part2e-0653.9
NC_002678:5139557:5159362515936251604261065Mesorhizobium loti MAFF303099, complete genometranslocation protein in type III secretion system, hrcQ8e-0651.6
NC_011772:1575674:159544815954481595807360Bacillus cereus G9842, complete genomeputative flagellar motor switch protein FliN9e-0651.6